RNA–Protein interactions for RNA: ENST00000358781.6

FAM3D-201, Transcript of family with sequence similarity 3 member D, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FAM3D, Length 1,319 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM3D-201ENST00000358781 GNAI3P08754 354 aa21.32■■□□□ 1
FAM3D-201ENST00000358781 C15orf52Q6ZUT6 534 aaKnown RBP21.32■■□□□ 1
FAM3D-201ENST00000358781 CNOT7Q9UIV1 285 aaKnown RBP21.32■■□□□ 1
FAM3D-201ENST00000358781 MROH5Q6ZUA9 1318 aa21.32■■□□□ 1
FAM3D-201ENST00000358781 USP17L3A6NCW0 530 aa21.31■■□□□ 1
FAM3D-201ENST00000358781 USP17L4A6NCW7 530 aa21.31■■□□□ 1
FAM3D-201ENST00000358781 RFX5P48382 616 aaPredicted RBP21.31■■□□□ 1
FAM3D-201ENST00000358781 USP17L1Q7RTZ2 530 aa21.31■■□□□ 1
FAM3D-201ENST00000358781 MICALL2Q8IY33 904 aa21.31■■□□□ 1
FAM3D-201ENST00000358781 KLHDC4Q8TBB5 520 aa21.31■■□□□ 1
FAM3D-201ENST00000358781 SHTN1A0MZ66 631 aa21.3■■□□□ 1
FAM3D-201ENST00000358781 H7C1D1 291 aa21.3■■□□□ 1
FAM3D-201ENST00000358781 LRRC24Q50LG9 513 aa21.3■■□□□ 1
FAM3D-201ENST00000358781 TMEM57Q8N5G2 664 aa21.3■■□□□ 1
FAM3D-201ENST00000358781 ZNF609O15014 1411 aa21.3■■□□□ 1
FAM3D-201ENST00000358781 RSBN1LQ6PCB5 846 aaPredicted RBP21.29■■□□□ 1
FAM3D-201ENST00000358781 PTPN12Q05209 780 aaKnown RBP21.29■■□□□ 1
FAM3D-201ENST00000358781 UBE4AQ14139 1066 aa21.29■■□□□ 1
FAM3D-201ENST00000358781 FTSJ3Q8IY81 847 aaKnown RBP21.29■■□□□ 1
FAM3D-201ENST00000358781 DZIP1LQ8IYY4 767 aaKnown RBP21.29■■□□□ 1
FAM3D-201ENST00000358781 AGBL3Q8NEM8 1001 aa21.29■■□□□ 1
FAM3D-201ENST00000358781 ZNF646O15015 1829 aaPredicted RBP21.28■■□□□ 1
FAM3D-201ENST00000358781 ITGBL1O95965 494 aaPredicted RBP21.28■■□□□ 1
FAM3D-201ENST00000358781 METTL24Q5JXM2 366 aa21.28■■□□□ 1
FAM3D-201ENST00000358781 MAP1SQ66K74 1059 aaPredicted RBP21.28■■□□□ 1
FAM3D-201ENST00000358781 ZNF804AQ7Z570 1209 aa21.28■■□□□ 1
FAM3D-201ENST00000358781 CNTROBQ8N137 903 aa21.28■■□□□ 1
FAM3D-201ENST00000358781 TRPM4Q8TD43 1214 aa21.28■■□□□ 1
FAM3D-201ENST00000358781 CD209Q9NNX6 404 aa21.28■■□□□ 1
FAM3D-201ENST00000358781 EYA2O00167 538 aa21.27■□□□□ 0.99
FAM3D-201ENST00000358781 HIRAP54198 1017 aaPredicted RBP21.27■□□□□ 0.99
FAM3D-201ENST00000358781 DACT2Q5SW24 774 aa21.27■□□□□ 0.99
FAM3D-201ENST00000358781 STRIP1Q5VSL9 837 aa21.27■□□□□ 0.99
FAM3D-201ENST00000358781 VGLL2Q8N8G2 317 aa21.27■□□□□ 0.99
FAM3D-201ENST00000358781 GMLQ99445 158 aa21.27■□□□□ 0.99
FAM3D-201ENST00000358781 PASKQ96RG2 1323 aa21.26■□□□□ 0.99
FAM3D-201ENST00000358781 GNAI2P04899 355 aa21.26■□□□□ 0.99
FAM3D-201ENST00000358781 RLBP1P12271 317 aa21.26■□□□□ 0.99
FAM3D-201ENST00000358781 PDE8BO95263 885 aa21.25■□□□□ 0.99
FAM3D-201ENST00000358781 IL1R1P14778 569 aa21.25■□□□□ 0.99
FAM3D-201ENST00000358781 MTX1Q13505 466 aa21.25■□□□□ 0.99
FAM3D-201ENST00000358781 TTLL5Q6EMB2 1281 aa21.25■□□□□ 0.99
FAM3D-201ENST00000358781 SAMD7Q7Z3H4 446 aa21.25■□□□□ 0.99
FAM3D-201ENST00000358781 ZC3H15Q8WU90 426 aaKnown RBP21.25■□□□□ 0.99
FAM3D-201ENST00000358781 FBXW7Q969H0 707 aa21.25■□□□□ 0.99
FAM3D-201ENST00000358781 PGAP2Q9UHJ9 254 aa21.25■□□□□ 0.99
FAM3D-201ENST00000358781 FBXO3Q9UK99 471 aa21.25■□□□□ 0.99
FAM3D-201ENST00000358781 RCAN3Q9UKA8 241 aa21.25■□□□□ 0.99
FAM3D-201ENST00000358781 CIAO1O76071 339 aa21.24■□□□□ 0.99
FAM3D-201ENST00000358781 ZNF280AP59817 542 aaPredicted RBP21.24■□□□□ 0.99
FAM3D-201ENST00000358781 HTRA3P83110 453 aa21.24■□□□□ 0.99
FAM3D-201ENST00000358781 TBC1D10BQ4KMP7 808 aaPredicted RBP21.24■□□□□ 0.99
FAM3D-201ENST00000358781 ATG9AQ7Z3C6 839 aa21.24■□□□□ 0.99
FAM3D-201ENST00000358781 MXD3Q9BW11 206 aa21.24■□□□□ 0.99
FAM3D-201ENST00000358781 EGFRP00533 1210 aa21.23■□□□□ 0.99
FAM3D-201ENST00000358781 USP17L8P0C7I0 530 aa21.23■□□□□ 0.99
FAM3D-201ENST00000358781 GTF2IP78347 998 aa21.23■□□□□ 0.99
FAM3D-201ENST00000358781 ITPRIPQ8IWB1 547 aa21.23■□□□□ 0.99
FAM3D-201ENST00000358781 SIL1Q9H173 461 aa21.23■□□□□ 0.99
FAM3D-201ENST00000358781 COPRSQ9NQ92 184 aa21.23■□□□□ 0.99
FAM3D-201ENST00000358781 MYO3BQ8WXR4 1341 aa21.22■□□□□ 0.99
FAM3D-201ENST00000358781 SRGAP3O43295 1099 aa21.22■□□□□ 0.99
FAM3D-201ENST00000358781 GYG1P46976 350 aa21.22■□□□□ 0.99
FAM3D-201ENST00000358781 FAM84BQ96KN1 310 aaPredicted RBP21.22■□□□□ 0.99
FAM3D-201ENST00000358781 PA2G4Q9UQ80 394 aaKnown RBP21.22■□□□□ 0.99
FAM3D-201ENST00000358781 HIBADHP31937 336 aaKnown RBP21.21■□□□□ 0.99
FAM3D-201ENST00000358781 PUM3Q15397 648 aaKnown RBP21.21■□□□□ 0.99
FAM3D-201ENST00000358781 KIF4BQ2VIQ3 1234 aa21.21■□□□□ 0.99
FAM3D-201ENST00000358781 RBM26Q5T8P6 1007 aaKnown RBP21.21■□□□□ 0.99
FAM3D-201ENST00000358781 DNAJC5GQ8N7S2 189 aa21.21■□□□□ 0.99
FAM3D-201ENST00000358781 PANK1Q8TE04 598 aa21.21■□□□□ 0.99
FAM3D-201ENST00000358781 MS4A1P11836 297 aa21.2■□□□□ 0.98
FAM3D-201ENST00000358781 FGFR2P21802 821 aa21.2■□□□□ 0.98
FAM3D-201ENST00000358781 TDRD7Q8NHU6 1098 aaKnown RBP21.2■□□□□ 0.98
FAM3D-201ENST00000358781 CREBZFQ9NS37 354 aa21.2■□□□□ 0.98
FAM3D-201ENST00000358781 ZBTB7BO15156 539 aaPredicted RBP21.19■□□□□ 0.98
FAM3D-201ENST00000358781 IL15P40933 162 aaPredicted RBP21.19■□□□□ 0.98
FAM3D-201ENST00000358781 FBXO33Q7Z6M2 555 aa21.19■□□□□ 0.98
FAM3D-201ENST00000358781 MYOZ2Q9NPC6 264 aa21.19■□□□□ 0.98
FAM3D-201ENST00000358781 CEP126Q9P2H0 1117 aa21.19■□□□□ 0.98
FAM3D-201ENST00000358781 POLR2AP24928 1970 aaKnown RBP21.18■□□□□ 0.98
FAM3D-201ENST00000358781 SASH1O94885 1247 aa21.18■□□□□ 0.98
FAM3D-201ENST00000358781 IFIT1P09914 478 aaKnown RBP21.18■□□□□ 0.98
FAM3D-201ENST00000358781 MMP14P50281 582 aa21.18■□□□□ 0.98
FAM3D-201ENST00000358781 CAVIN4Q5BKX8 364 aa21.18■□□□□ 0.98
FAM3D-201ENST00000358781 OGFOD1Q8N543 542 aa21.18■□□□□ 0.98
FAM3D-201ENST00000358781 GLIS2Q9BZE0 524 aaPredicted RBP21.18■□□□□ 0.98
FAM3D-201ENST00000358781 FAM205AQ6ZU69 1335 aa21.18■□□□□ 0.98
FAM3D-201ENST00000358781 TRPM7Q96QT4 1865 aa21.17■□□□□ 0.98
FAM3D-201ENST00000358781 PNMA6EA0A0J9YXQ4 647 aa21.17■□□□□ 0.98
FAM3D-201ENST00000358781 TMEM88BA6NKF7 163 aa21.17■□□□□ 0.98
FAM3D-201ENST00000358781 TRAF5O00463 557 aa21.17■□□□□ 0.98
FAM3D-201ENST00000358781 SLC5A1P13866 664 aa21.17■□□□□ 0.98
FAM3D-201ENST00000358781 FKBP1AP62942 108 aaKnown RBP21.17■□□□□ 0.98
FAM3D-201ENST00000358781 VPS37DQ86XT2 251 aa21.17■□□□□ 0.98
FAM3D-201ENST00000358781 CERS5Q8N5B7 392 aa21.17■□□□□ 0.98
FAM3D-201ENST00000358781 LPIN2Q92539 896 aa21.17■□□□□ 0.98
FAM3D-201ENST00000358781 FMR1Q06787 632 aaKnown RBP eCLIP21.16■□□□□ 0.98
FAM3D-201ENST00000358781 CDC37L1Q7L3B6 337 aa21.16■□□□□ 0.98
FAM3D-201ENST00000358781 KIAA0825Q8IV33 1275 aa21.16■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms