RNA–Protein interactions for RNA: ENST00000358278.7

TPM1-206, Transcript of tropomyosin 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TPM1, Length 1,717 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-206ENST00000358278 TNNI3KQ59H18 835 aa18.77■□□□□ 0.59
TPM1-206ENST00000358278 ANKRD45Q5TZF3 282 aa18.77■□□□□ 0.59
TPM1-206ENST00000358278 GPR101Q96P66 508 aaPredicted RBP18.77■□□□□ 0.59
TPM1-206ENST00000358278 EYA3Q99504 573 aa18.77■□□□□ 0.59
TPM1-206ENST00000358278 FPGT-TNNI3KV9GXZ4 949 aa18.77■□□□□ 0.59
TPM1-206ENST00000358278 SMARCA5O60264 1052 aaPredicted RBP18.76■□□□□ 0.59
TPM1-206ENST00000358278 RASSF7Q02833 373 aa18.76■□□□□ 0.59
TPM1-206ENST00000358278 WASHC4Q2M389 1173 aa18.76■□□□□ 0.59
TPM1-206ENST00000358278 CENPQQ7L2Z9 268 aaPredicted RBP18.76■□□□□ 0.59
TPM1-206ENST00000358278 NEUROD6Q96NK8 337 aa18.76■□□□□ 0.59
TPM1-206ENST00000358278 GPR108Q9NPR9 543 aa18.76■□□□□ 0.59
TPM1-206ENST00000358278 MED23Q9ULK4 1368 aa18.76■□□□□ 0.59
TPM1-206ENST00000358278 LTBP3Q9NS15 1303 aa18.76■□□□□ 0.59
TPM1-206ENST00000358278 TIAM2Q8IVF5 1701 aa18.76■□□□□ 0.59
TPM1-206ENST00000358278 FGFR2P21802 821 aa18.75■□□□□ 0.59
TPM1-206ENST00000358278 AACSQ86V21 672 aa18.75■□□□□ 0.59
TPM1-206ENST00000358278 ZNF277Q9NRM2 450 aaPredicted RBP18.75■□□□□ 0.59
TPM1-206ENST00000358278 KDM2BQ8NHM5 1336 aa18.75■□□□□ 0.59
TPM1-206ENST00000358278 RIMBP2O15034 1052 aa18.74■□□□□ 0.59
TPM1-206ENST00000358278 TIMM10P62072 90 aa18.74■□□□□ 0.59
TPM1-206ENST00000358278 ZC3H12CQ9C0D7 883 aaKnown RBP18.74■□□□□ 0.59
TPM1-206ENST00000358278 GTF3C3Q9Y5Q9 886 aa18.74■□□□□ 0.59
TPM1-206ENST00000358278 PPIP5K2O43314 1243 aa18.74■□□□□ 0.59
TPM1-206ENST00000358278 KLRK1P26718 216 aa18.74■□□□□ 0.59
TPM1-206ENST00000358278 PSME4Q14997 1843 aa18.73■□□□□ 0.59
TPM1-206ENST00000358278 IFIT2P09913 472 aaKnown RBP18.73■□□□□ 0.59
TPM1-206ENST00000358278 AOC3Q16853 763 aa18.73■□□□□ 0.59
TPM1-206ENST00000358278 CAVIN4Q5BKX8 364 aa18.73■□□□□ 0.59
TPM1-206ENST00000358278 GORABQ5T7V8 394 aa18.73■□□□□ 0.59
TPM1-206ENST00000358278 VPS37DQ86XT2 251 aa18.73■□□□□ 0.59
TPM1-206ENST00000358278 EAF2Q96CJ1 260 aaPredicted RBP18.73■□□□□ 0.59
TPM1-206ENST00000358278 G3V3G9 751 aa18.72■□□□□ 0.59
TPM1-206ENST00000358278 IARSP41252 1262 aaKnown RBP18.72■□□□□ 0.59
TPM1-206ENST00000358278 KIAA2012Q0VF49 1180 aa18.72■□□□□ 0.59
TPM1-206ENST00000358278 DCAF8Q5TAQ9 597 aa18.72■□□□□ 0.59
TPM1-206ENST00000358278 LARGE2Q8N3Y3 721 aa18.72■□□□□ 0.59
TPM1-206ENST00000358278 XAGE2Q96GT9 111 aa18.72■□□□□ 0.59
TPM1-206ENST00000358278 LNPKQ9C0E8 428 aa18.72■□□□□ 0.59
TPM1-206ENST00000358278 CCDC8Q9H0W5 538 aaPredicted RBP18.72■□□□□ 0.59
TPM1-206ENST00000358278 SCN9AQ15858 1988 aa18.72■□□□□ 0.59
TPM1-206ENST00000358278 ADORA1P30542 326 aa18.71■□□□□ 0.59
TPM1-206ENST00000358278 NUCB1Q02818 461 aa18.71■□□□□ 0.59
TPM1-206ENST00000358278 ZNF804AQ7Z570 1209 aa18.71■□□□□ 0.59
TPM1-206ENST00000358278 TXNRD3Q86VQ6 643 aa18.71■□□□□ 0.59
TPM1-206ENST00000358278 CHD1LQ86WJ1 897 aa18.71■□□□□ 0.59
TPM1-206ENST00000358278 VPS33BQ9H267 617 aa18.71■□□□□ 0.59
TPM1-206ENST00000358278 GYG1P46976 350 aa18.71■□□□□ 0.59
TPM1-206ENST00000358278 C15orf52Q6ZUT6 534 aaKnown RBP18.71■□□□□ 0.59
TPM1-206ENST00000358278 DBNDD2Q9BQY9 259 aa18.71■□□□□ 0.59
TPM1-206ENST00000358278 TLR7Q9NYK1 1049 aaKnown RBP18.71■□□□□ 0.59
TPM1-206ENST00000358278 IRS2Q9Y4H2 1338 aa18.71■□□□□ 0.59
TPM1-206ENST00000358278 COL4A5P29400 1685 aa18.7■□□□□ 0.58
TPM1-206ENST00000358278 AKAP11Q9UKA4 1901 aa18.7■□□□□ 0.58
TPM1-206ENST00000358278 LMNB1P20700 586 aa18.7■□□□□ 0.58
TPM1-206ENST00000358278 DBNLQ9UJU6 430 aaKnown RBP18.7■□□□□ 0.58
TPM1-206ENST00000358278 HIBADHP31937 336 aaKnown RBP18.69■□□□□ 0.58
TPM1-206ENST00000358278 JDP2Q8WYK2 163 aa18.69■□□□□ 0.58
TPM1-206ENST00000358278 FAM84BQ96KN1 310 aaPredicted RBP18.69■□□□□ 0.58
TPM1-206ENST00000358278 DBNDD1Q9H9R9 158 aa18.69■□□□□ 0.58
TPM1-206ENST00000358278 BCAMP50895 628 aa18.69■□□□□ 0.58
TPM1-206ENST00000358278 DOK7Q18PE1 504 aa18.69■□□□□ 0.58
TPM1-206ENST00000358278 NIM1KQ8IY84 436 aa18.69■□□□□ 0.58
TPM1-206ENST00000358278 CCDC158Q5M9N0 1113 aa18.68■□□□□ 0.58
TPM1-206ENST00000358278 COA1Q9GZY4 146 aa18.68■□□□□ 0.58
TPM1-206ENST00000358278 GNL3LQ9NVN8 582 aaKnown RBP18.68■□□□□ 0.58
TPM1-206ENST00000358278 AK9Q5TCS8 1911 aa18.68■□□□□ 0.58
TPM1-206ENST00000358278 ECE2O60344 883 aa18.67■□□□□ 0.58
TPM1-206ENST00000358278 FRAT2O75474 233 aaPredicted RBP18.67■□□□□ 0.58
TPM1-206ENST00000358278 PHKA1P46020 1223 aa18.67■□□□□ 0.58
TPM1-206ENST00000358278 PRELPP51888 382 aa18.67■□□□□ 0.58
TPM1-206ENST00000358278 TTC39AQ5SRH9 613 aa18.67■□□□□ 0.58
TPM1-206ENST00000358278 CCDC102BQ68D86 513 aa18.67■□□□□ 0.58
TPM1-206ENST00000358278 GPATCH3Q96I76 525 aa18.67■□□□□ 0.58
TPM1-206ENST00000358278 RNF181Q9P0P0 153 aa18.67■□□□□ 0.58
TPM1-206ENST00000358278 ZNF646O15015 1829 aaPredicted RBP18.67■□□□□ 0.58
TPM1-206ENST00000358278 FBXO33Q7Z6M2 555 aa18.66■□□□□ 0.58
TPM1-206ENST00000358278 C16orf71Q8IYS4 520 aaPredicted RBP18.66■□□□□ 0.58
TPM1-206ENST00000358278 CD209Q9NNX6 404 aa18.66■□□□□ 0.58
TPM1-206ENST00000358278 MYO5AQ9Y4I1 1855 aaKnown RBP18.66■□□□□ 0.58
TPM1-206ENST00000358278 IQSEC3Q9UPP2 1182 aaPredicted RBP18.66■□□□□ 0.58
TPM1-206ENST00000358278 MX1P20591 662 aa18.65■□□□□ 0.58
TPM1-206ENST00000358278 C9orf131Q5VYM1 1079 aa18.65■□□□□ 0.58
TPM1-206ENST00000358278 PODNQ7Z5L7 613 aa18.65■□□□□ 0.58
TPM1-206ENST00000358278 OTUD7AQ8TE49 926 aaPredicted RBP18.65■□□□□ 0.58
TPM1-206ENST00000358278 MYH7P12883 1935 aa18.64■□□□□ 0.57
TPM1-206ENST00000358278 UQCRFS1P1P0C7P4 283 aa18.64■□□□□ 0.57
TPM1-206ENST00000358278 IL1R1P14778 569 aa18.64■□□□□ 0.57
TPM1-206ENST00000358278 ECHDC1Q9NTX5 307 aa18.63■□□□□ 0.57
TPM1-206ENST00000358278 ZNRF3Q9ULT6 936 aa18.63■□□□□ 0.57
TPM1-206ENST00000358278 ARID4AP29374 1257 aaPredicted RBP18.63■□□□□ 0.57
TPM1-206ENST00000358278 TSHZ3Q63HK5 1081 aa18.63■□□□□ 0.57
TPM1-206ENST00000358278 TDRD7Q8NHU6 1098 aaKnown RBP18.63■□□□□ 0.57
TPM1-206ENST00000358278 FBXW7Q969H0 707 aa18.63■□□□□ 0.57
TPM1-206ENST00000358278 TTC41PQ6P2S7 1318 aa18.62■□□□□ 0.57
TPM1-206ENST00000358278 SEMA3EO15041 775 aa18.62■□□□□ 0.57
TPM1-206ENST00000358278 RASGRF1Q13972 1273 aa18.62■□□□□ 0.57
TPM1-206ENST00000358278 DENND2AQ9ULE3 1009 aa18.62■□□□□ 0.57
TPM1-206ENST00000358278 COL1A1P02452 1464 aaPredicted RBP18.62■□□□□ 0.57
TPM1-206ENST00000358278 SALL3Q9BXA9 1300 aa18.61■□□□□ 0.57
TPM1-206ENST00000358278 YDJCA8MPS7 323 aa18.61■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms