RNA–Protein interactions for RNA: ENST00000357896.7

IFT20-202, Transcript of intraflagellar transport 20, humanhuman

TSL 1 (best) BASIC

Gene IFT20, Length 974 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT20-202ENST00000357896 APOBEC3FQ8IUX4 373 aaKnown RBP20.54■□□□□ 0.88
IFT20-202ENST00000357896 CDC5LQ99459 802 aaKnown RBP20.54■□□□□ 0.88
IFT20-202ENST00000357896 R3HDMLQ9H3Y0 253 aa20.54■□□□□ 0.88
IFT20-202ENST00000357896 LDLRAD1Q5T700 205 aa20.53■□□□□ 0.88
IFT20-202ENST00000357896 CCDC85AQ96PX6 553 aaPredicted RBP20.53■□□□□ 0.88
IFT20-202ENST00000357896 MYD88Q99836 296 aa20.53■□□□□ 0.88
IFT20-202ENST00000357896 CWC25Q9NXE8 425 aaPredicted RBP20.53■□□□□ 0.88
IFT20-202ENST00000357896 TRIM35Q9UPQ4 493 aa20.53■□□□□ 0.88
IFT20-202ENST00000357896 TRIM17Q9Y577 477 aa20.53■□□□□ 0.88
IFT20-202ENST00000357896 MED23Q9ULK4 1368 aa20.53■□□□□ 0.88
IFT20-202ENST00000357896 MANSC4A6NHS7 340 aaPredicted RBP20.52■□□□□ 0.88
IFT20-202ENST00000357896 FBXW7Q969H0 707 aa20.52■□□□□ 0.88
IFT20-202ENST00000357896 COA1Q9GZY4 146 aa20.52■□□□□ 0.88
IFT20-202ENST00000357896 PRKG1Q13976 671 aa20.51■□□□□ 0.87
IFT20-202ENST00000357896 SLC10A4Q96EP9 437 aa20.51■□□□□ 0.87
IFT20-202ENST00000357896 BSDC1Q9NW68 430 aaPredicted RBP20.51■□□□□ 0.87
IFT20-202ENST00000357896 ANGEL1Q9UNK9 670 aaKnown RBP20.51■□□□□ 0.87
IFT20-202ENST00000357896 MKI67P46013 3256 aaKnown RBP20.5■□□□□ 0.87
IFT20-202ENST00000357896 RALBP1Q15311 655 aa20.5■□□□□ 0.87
IFT20-202ENST00000357896 OTOP1Q7RTM1 612 aa20.5■□□□□ 0.87
IFT20-202ENST00000357896 IFNL1Q8IU54 200 aa20.5■□□□□ 0.87
IFT20-202ENST00000357896 CCDC146Q8IYE0 955 aa20.5■□□□□ 0.87
IFT20-202ENST00000357896 RUNDC1Q96C34 613 aa20.5■□□□□ 0.87
IFT20-202ENST00000357896 MXD3Q9BW11 206 aa20.5■□□□□ 0.87
IFT20-202ENST00000357896 MINPP1Q9UNW1 487 aa20.5■□□□□ 0.87
IFT20-202ENST00000357896 SASH1O94885 1247 aa20.49■□□□□ 0.87
IFT20-202ENST00000357896 ZBTB48P10074 688 aaPredicted RBP20.49■□□□□ 0.87
IFT20-202ENST00000357896 CCT4P50991 539 aaKnown RBP20.49■□□□□ 0.87
IFT20-202ENST00000357896 PHAXQ9H814 394 aaKnown RBP20.49■□□□□ 0.87
IFT20-202ENST00000357896 POTEFA5A3E0 1075 aa20.48■□□□□ 0.87
IFT20-202ENST00000357896 DDX58O95786 925 aaKnown RBP20.48■□□□□ 0.87
IFT20-202ENST00000357896 TTLL5Q6EMB2 1281 aa20.48■□□□□ 0.87
IFT20-202ENST00000357896 JARID2Q92833 1246 aaPredicted RBP20.48■□□□□ 0.87
IFT20-202ENST00000357896 ERO1AQ96HE7 468 aa20.48■□□□□ 0.87
IFT20-202ENST00000357896 METTL22Q9BUU2 404 aaPredicted RBP20.48■□□□□ 0.87
IFT20-202ENST00000357896 LEMD3Q9Y2U8 911 aa20.48■□□□□ 0.87
IFT20-202ENST00000357896 HTTP42858 3142 aa20.47■□□□□ 0.87
IFT20-202ENST00000357896 WTIPA6NIX2 430 aaPredicted RBP20.47■□□□□ 0.87
IFT20-202ENST00000357896 UNCXA6NJT0 531 aa20.47■□□□□ 0.87
IFT20-202ENST00000357896 CTSWP56202 376 aa20.47■□□□□ 0.87
IFT20-202ENST00000357896 CHMP4AQ9BY43 222 aa20.47■□□□□ 0.87
IFT20-202ENST00000357896 MBIPQ9NS73 344 aa20.47■□□□□ 0.87
IFT20-202ENST00000357896 COL1A1P02452 1464 aaPredicted RBP20.46■□□□□ 0.87
IFT20-202ENST00000357896 PPP1R12BO60237 982 aaPredicted RBP20.46■□□□□ 0.87
IFT20-202ENST00000357896 MAP3K11Q16584 847 aa20.46■□□□□ 0.87
IFT20-202ENST00000357896 OTUD7BQ6GQQ9 843 aa20.46■□□□□ 0.87
IFT20-202ENST00000357896 KIAA0825Q8IV33 1275 aa20.46■□□□□ 0.87
IFT20-202ENST00000357896 DEFB129Q9H1M3 183 aa20.46■□□□□ 0.87
IFT20-202ENST00000357896 PTPN22Q9Y2R2 807 aa20.46■□□□□ 0.87
IFT20-202ENST00000357896 TTLL11Q8NHH1 800 aa20.45■□□□□ 0.86
IFT20-202ENST00000357896 ZBED3Q96IU2 234 aaPredicted RBP20.45■□□□□ 0.86
IFT20-202ENST00000357896 CENPFP49454 3210 aa20.44■□□□□ 0.86
IFT20-202ENST00000357896 ARMC5Q96C12 935 aa20.44■□□□□ 0.86
IFT20-202ENST00000357896 GREM2Q9H772 168 aa20.44■□□□□ 0.86
IFT20-202ENST00000357896 PPP2R3BQ9Y5P8 575 aa20.44■□□□□ 0.86
IFT20-202ENST00000357896 IGF2BP3O00425 579 aaKnown RBP eCLIP20.43■□□□□ 0.86
IFT20-202ENST00000357896 WDR43Q15061 677 aaKnown RBP eCLIP20.43■□□□□ 0.86
IFT20-202ENST00000357896 DLGAP5Q15398 846 aa20.43■□□□□ 0.86
IFT20-202ENST00000357896 SUPT20HL1Q3ZLR7 823 aa20.43■□□□□ 0.86
IFT20-202ENST00000357896 WNK4Q96J92 1243 aa20.43■□□□□ 0.86
IFT20-202ENST00000357896 ANKRD2Q9GZV1 360 aa20.43■□□□□ 0.86
IFT20-202ENST00000357896 EFCC1Q9HA90 598 aa20.43■□□□□ 0.86
IFT20-202ENST00000357896 IGHMBP2P38935 993 aaKnown RBP20.42■□□□□ 0.86
IFT20-202ENST00000357896 FXR1P51114 621 aaKnown RBP eCLIP20.42■□□□□ 0.86
IFT20-202ENST00000357896 TXNRD3Q86VQ6 643 aa20.42■□□□□ 0.86
IFT20-202ENST00000357896 TMEM106CQ9BVX2 250 aa20.42■□□□□ 0.86
IFT20-202ENST00000357896 ZBTB4Q9P1Z0 1013 aaPredicted RBP20.42■□□□□ 0.86
IFT20-202ENST00000357896 ZNF804BA4D1E1 1349 aa20.42■□□□□ 0.86
IFT20-202ENST00000357896 ELL2O00472 640 aaPredicted RBP20.41■□□□□ 0.86
IFT20-202ENST00000357896 ZNF853P0CG23 659 aa20.41■□□□□ 0.86
IFT20-202ENST00000357896 EN2P19622 333 aaPredicted RBP20.41■□□□□ 0.86
IFT20-202ENST00000357896 GTF2IP78347 998 aa20.41■□□□□ 0.86
IFT20-202ENST00000357896 CALD1Q05682 793 aaKnown RBP20.41■□□□□ 0.86
IFT20-202ENST00000357896 MTMR14Q8NCE2 650 aa20.41■□□□□ 0.86
IFT20-202ENST00000357896 CD99L2Q8TCZ2 262 aa20.41■□□□□ 0.86
IFT20-202ENST00000357896 FZD1Q9UP38 647 aa20.41■□□□□ 0.86
IFT20-202ENST00000357896 MAP3K2Q9Y2U5 619 aa20.41■□□□□ 0.86
IFT20-202ENST00000357896 MYO1BO43795 1136 aa20.4■□□□□ 0.86
IFT20-202ENST00000357896 IREB2P48200 963 aaKnown RBP20.4■□□□□ 0.86
IFT20-202ENST00000357896 GNAI1P63096 354 aa20.4■□□□□ 0.86
IFT20-202ENST00000357896 SP3Q02447 781 aa20.4■□□□□ 0.86
IFT20-202ENST00000357896 NEXNQ0ZGT2 675 aa20.4■□□□□ 0.86
IFT20-202ENST00000357896 CRHR2Q13324 411 aa20.4■□□□□ 0.86
IFT20-202ENST00000357896 ARHGEF6Q15052 776 aa20.4■□□□□ 0.86
IFT20-202ENST00000357896 CCDC30Q5VVM6 783 aa20.4■□□□□ 0.86
IFT20-202ENST00000357896 CLMNQ96JQ2 1002 aa20.4■□□□□ 0.86
IFT20-202ENST00000357896 IFT57Q9NWB7 429 aa20.4■□□□□ 0.86
IFT20-202ENST00000357896 KSR2Q6VAB6 950 aa20.39■□□□□ 0.85
IFT20-202ENST00000357896 BRCA2P51587 3418 aa20.38■□□□□ 0.85
IFT20-202ENST00000357896 KCNJ4P48050 445 aa20.38■□□□□ 0.85
IFT20-202ENST00000357896 NBPF11Q86T75 865 aa20.38■□□□□ 0.85
IFT20-202ENST00000357896 MPHOSPH8Q99549 860 aa20.38■□□□□ 0.85
IFT20-202ENST00000357896 RBBP6Q7Z6E9 1792 aaKnown RBP20.38■□□□□ 0.85
IFT20-202ENST00000357896 ZNF646O15015 1829 aaPredicted RBP20.37■□□□□ 0.85
IFT20-202ENST00000357896 MYBBP1AQ9BQG0 1328 aaKnown RBP20.37■□□□□ 0.85
IFT20-202ENST00000357896 IGKV5-2P06315 115 aa20.37■□□□□ 0.85
IFT20-202ENST00000357896 ANKRD13AQ8IZ07 590 aa20.37■□□□□ 0.85
IFT20-202ENST00000357896 CD209Q9NNX6 404 aa20.37■□□□□ 0.85
IFT20-202ENST00000357896 ADAMTS8Q9UP79 889 aa20.37■□□□□ 0.85
IFT20-202ENST00000357896 TESPA1A2RU30 521 aaPredicted RBP20.36■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms