RNA–Protein interactions for RNA: ENST00000357811.7

COL13A1-202, Transcript of collagen type XIII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL13A1, Length 2,991 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1-202ENST00000357811 ADD1P35611 737 aaKnown RBP24.02■■□□□ 1.44
COL13A1-202ENST00000357811 CEP126Q9P2H0 1117 aa24.02■■□□□ 1.44
COL13A1-202ENST00000357811 KAT6BQ8WYB5 2073 aa24.02■■□□□ 1.44
COL13A1-202ENST00000357811 SH3TC1Q8TE82 1336 aa24.01■■□□□ 1.43
COL13A1-202ENST00000357811 PDIA3P30101 505 aaKnown RBP24.01■■□□□ 1.43
COL13A1-202ENST00000357811 SPTLC3Q9NUV7 552 aa24.01■■□□□ 1.43
COL13A1-202ENST00000357811 A0A0U1RQG5 324 aaPredicted RBP24.01■■□□□ 1.43
COL13A1-202ENST00000357811 RNF113AO15541 343 aaKnown RBP24.01■■□□□ 1.43
COL13A1-202ENST00000357811 TAF7LQ5H9L4 462 aa24.01■■□□□ 1.43
COL13A1-202ENST00000357811 SMARCC2Q8TAQ2 1214 aa24■■□□□ 1.43
COL13A1-202ENST00000357811 MRC1P22897 1456 aa24■■□□□ 1.43
COL13A1-202ENST00000357811 GPTP24298 496 aa24■■□□□ 1.43
COL13A1-202ENST00000357811 ZNF75DP51815 510 aa24■■□□□ 1.43
COL13A1-202ENST00000357811 CCDC57Q2TAC2 916 aa24■■□□□ 1.43
COL13A1-202ENST00000357811 CCDC144BQ3MJ40 725 aa24■■□□□ 1.43
COL13A1-202ENST00000357811 TTC39AQ5SRH9 613 aa24■■□□□ 1.43
COL13A1-202ENST00000357811 CCDC144CPQ8IYA2 1237 aa24■■□□□ 1.43
COL13A1-202ENST00000357811 ZSCAN16Q9H4T2 348 aaPredicted RBP24■■□□□ 1.43
COL13A1-202ENST00000357811 HELLSQ9NRZ9 838 aa24■■□□□ 1.43
COL13A1-202ENST00000357811 CLIP2Q9UDT6 1046 aa24■■□□□ 1.43
COL13A1-202ENST00000357811 DENND2AQ9ULE3 1009 aa24■■□□□ 1.43
COL13A1-202ENST00000357811 EXOSC10Q01780 885 aaKnown RBP23.99■■□□□ 1.43
COL13A1-202ENST00000357811 ZNF710Q8N1W2 664 aa23.99■■□□□ 1.43
COL13A1-202ENST00000357811 RIOK3O14730 519 aaKnown RBP23.99■■□□□ 1.43
COL13A1-202ENST00000357811 HSPA2P54652 639 aa23.98■■□□□ 1.43
COL13A1-202ENST00000357811 FSIP1Q8NA03 581 aa23.98■■□□□ 1.43
COL13A1-202ENST00000357811 PRDM10Q9NQV6 1147 aa23.98■■□□□ 1.43
COL13A1-202ENST00000357811 A0A1B0GVL5 298 aa23.98■■□□□ 1.43
COL13A1-202ENST00000357811 GOLGA6L19H0YKK7 550 aa23.98■■□□□ 1.43
COL13A1-202ENST00000357811 PDIA4P13667 645 aaKnown RBP23.98■■□□□ 1.43
COL13A1-202ENST00000357811 XAGE2Q96GT9 111 aa23.98■■□□□ 1.43
COL13A1-202ENST00000357811 DSCC1Q9BVC3 393 aa23.98■■□□□ 1.43
COL13A1-202ENST00000357811 HMGB1P09429 215 aaKnown RBP23.97■■□□□ 1.43
COL13A1-202ENST00000357811 RXRAP19793 462 aa23.97■■□□□ 1.43
COL13A1-202ENST00000357811 ZAP70P43403 619 aa23.97■■□□□ 1.43
COL13A1-202ENST00000357811 CCDC73Q6ZRK6 1079 aa23.97■■□□□ 1.43
COL13A1-202ENST00000357811 ILDR1Q86SU0 546 aaPredicted RBP23.97■■□□□ 1.43
COL13A1-202ENST00000357811 KIF3AQ9Y496 699 aa23.97■■□□□ 1.43
COL13A1-202ENST00000357811 MST1RQ04912 1400 aa23.97■■□□□ 1.43
COL13A1-202ENST00000357811 PRIMPOLQ96LW4 560 aa23.97■■□□□ 1.43
COL13A1-202ENST00000357811 PUS7LQ9H0K6 701 aaKnown RBP23.97■■□□□ 1.43
COL13A1-202ENST00000357811 FILIP1Q7Z7B0 1213 aa23.97■■□□□ 1.43
COL13A1-202ENST00000357811 FDPSP14324 419 aaKnown RBP23.96■■□□□ 1.43
COL13A1-202ENST00000357811 CACTINQ8WUQ7 758 aaKnown RBP23.96■■□□□ 1.43
COL13A1-202ENST00000357811 CAMTA1Q9Y6Y1 1673 aa23.96■■□□□ 1.43
COL13A1-202ENST00000357811 KINO60870 393 aaKnown RBP23.96■■□□□ 1.43
COL13A1-202ENST00000357811 BECN2A8MW95 431 aa23.95■■□□□ 1.43
COL13A1-202ENST00000357811 FGAP02671 866 aa23.95■■□□□ 1.43
COL13A1-202ENST00000357811 HMGN5P82970 282 aaKnown RBP23.95■■□□□ 1.43
COL13A1-202ENST00000357811 CCDC158Q5M9N0 1113 aa23.95■■□□□ 1.43
COL13A1-202ENST00000357811 ZSCAN25Q6NSZ9 544 aa23.95■■□□□ 1.43
COL13A1-202ENST00000357811 CCDC191Q8NCU4 936 aa23.95■■□□□ 1.43
COL13A1-202ENST00000357811 ZNF592Q92610 1267 aa23.95■■□□□ 1.43
COL13A1-202ENST00000357811 RBM43Q6ZSC3 357 aaKnown RBP23.95■■□□□ 1.42
COL13A1-202ENST00000357811 ADAMTS7Q9UKP4 1686 aa23.95■■□□□ 1.42
COL13A1-202ENST00000357811 ARFGEF2Q9Y6D5 1785 aa23.95■■□□□ 1.42
COL13A1-202ENST00000357811 KLF18A0A0U1RQI7 1052 aa23.94■■□□□ 1.42
COL13A1-202ENST00000357811 CHAF1AQ13111 956 aaPredicted RBP23.94■■□□□ 1.42
COL13A1-202ENST00000357811 TDRD7Q8NHU6 1098 aaKnown RBP23.94■■□□□ 1.42
COL13A1-202ENST00000357811 BCL2L12Q9HB09 334 aa23.94■■□□□ 1.42
COL13A1-202ENST00000357811 PALLDQ8WX93 1383 aa23.94■■□□□ 1.42
COL13A1-202ENST00000357811 BIN1O00499 593 aa23.94■■□□□ 1.42
COL13A1-202ENST00000357811 SNW1Q13573 536 aaKnown RBP23.94■■□□□ 1.42
COL13A1-202ENST00000357811 ISM2Q6H9L7 571 aa23.94■■□□□ 1.42
COL13A1-202ENST00000357811 PLA2G4DQ86XP0 818 aa23.94■■□□□ 1.42
COL13A1-202ENST00000357811 RCOR1Q9UKL0 485 aa23.94■■□□□ 1.42
COL13A1-202ENST00000357811 GOLGA8BA8MQT2 603 aa23.94■■□□□ 1.42
COL13A1-202ENST00000357811 FOXP2O15409 715 aa23.94■■□□□ 1.42
COL13A1-202ENST00000357811 SF3A1Q15459 793 aaKnown RBP23.94■■□□□ 1.42
COL13A1-202ENST00000357811 SDF4Q9BRK5 362 aa23.94■■□□□ 1.42
COL13A1-202ENST00000357811 LLPHQ9BRT6 129 aaKnown RBP23.94■■□□□ 1.42
COL13A1-202ENST00000357811 SPATA31A3Q5VYP0 1347 aa23.94■■□□□ 1.42
COL13A1-202ENST00000357811 CARMIL3Q8ND23 1372 aa23.93■■□□□ 1.42
COL13A1-202ENST00000357811 NAA16Q6N069 864 aaPredicted RBP23.93■■□□□ 1.42
COL13A1-202ENST00000357811 NKX2-3Q8TAU0 364 aa23.93■■□□□ 1.42
COL13A1-202ENST00000357811 CLIC4Q9Y696 253 aa23.93■■□□□ 1.42
COL13A1-202ENST00000357811 PRC1O43663 620 aa23.93■■□□□ 1.42
COL13A1-202ENST00000357811 ASAP1Q9ULH1 1129 aa23.93■■□□□ 1.42
COL13A1-202ENST00000357811 PCDH11XQ9BZA7 1347 aa23.92■■□□□ 1.42
COL13A1-202ENST00000357811 PCDH11YQ9BZA8 1340 aa23.92■■□□□ 1.42
COL13A1-202ENST00000357811 DNAJC10Q8IXB1 793 aa23.92■■□□□ 1.42
COL13A1-202ENST00000357811 AIFM3Q96NN9 605 aa23.92■■□□□ 1.42
COL13A1-202ENST00000357811 PCDHA7Q9UN72 937 aa23.92■■□□□ 1.42
COL13A1-202ENST00000357811 APPP05067 770 aa23.92■■□□□ 1.42
COL13A1-202ENST00000357811 IQCB1Q15051 598 aa23.91■■□□□ 1.42
COL13A1-202ENST00000357811 CADPS2Q86UW7 1296 aa23.91■■□□□ 1.42
COL13A1-202ENST00000357811 AOPEPQ8N6M6 819 aa23.91■■□□□ 1.42
COL13A1-202ENST00000357811 CPLX1O14810 134 aa23.91■■□□□ 1.42
COL13A1-202ENST00000357811 TPM3P06753 285 aa23.91■■□□□ 1.42
COL13A1-202ENST00000357811 IMMTQ16891 758 aaKnown RBP23.91■■□□□ 1.42
COL13A1-202ENST00000357811 MAP7D2Q96T17 732 aa23.91■■□□□ 1.42
COL13A1-202ENST00000357811 ORC3Q9UBD5 711 aaPredicted RBP23.91■■□□□ 1.42
COL13A1-202ENST00000357811 PRDM4Q9UKN5 801 aa23.91■■□□□ 1.42
COL13A1-202ENST00000357811 A0A0G2JS52 829 aa23.9■■□□□ 1.42
COL13A1-202ENST00000357811 NAA30Q147X3 362 aaPredicted RBP23.9■■□□□ 1.42
COL13A1-202ENST00000357811 STK11IPQ8N1F8 1099 aa23.9■■□□□ 1.42
COL13A1-202ENST00000357811 C8orf76Q96K31 380 aa23.9■■□□□ 1.42
COL13A1-202ENST00000357811 ZNF396Q96N95 335 aaPredicted RBP23.9■■□□□ 1.42
COL13A1-202ENST00000357811 NDUFA8P51970 172 aa23.9■■□□□ 1.42
COL13A1-202ENST00000357811 EVA1CP58658 441 aa23.9■■□□□ 1.42
Retrieved 100 of 20,778 RNA–protein pairs in 55.3 ms