RNA–Protein interactions for RNA: ENST00000357783.6

PHTF1-201, Transcript of putative homeodomain transcription factor 1, humanhuman

TSL 1 (best) BASIC

Gene PHTF1, Length 2,747 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHTF1-201ENST00000357783 CTSWP56202 376 aa18.73■□□□□ 0.59
PHTF1-201ENST00000357783 CHST3Q7LGC8 479 aa18.73■□□□□ 0.59
PHTF1-201ENST00000357783 NAP1L5Q96NT1 182 aaPredicted RBP18.73■□□□□ 0.59
PHTF1-201ENST00000357783 TRMT112Q9UI30 125 aaKnown RBP18.73■□□□□ 0.59
PHTF1-201ENST00000357783 NAP1L2Q9ULW6 460 aaPredicted RBP18.73■□□□□ 0.59
PHTF1-201ENST00000357783 NUP98P52948 1817 aa18.72■□□□□ 0.59
PHTF1-201ENST00000357783 A0A0G2JS52 829 aa18.72■□□□□ 0.59
PHTF1-201ENST00000357783 IRS4O14654 1257 aaPredicted RBP18.72■□□□□ 0.59
PHTF1-201ENST00000357783 EXOSC10Q01780 885 aaKnown RBP18.72■□□□□ 0.59
PHTF1-201ENST00000357783 RIPOR2Q9Y4F9 1068 aa18.72■□□□□ 0.59
PHTF1-201ENST00000357783 PFKFB2O60825 505 aa18.72■□□□□ 0.59
PHTF1-201ENST00000357783 LRRFIP1Q32MZ4 808 aaKnown RBP18.72■□□□□ 0.59
PHTF1-201ENST00000357783 FAM184AQ8NB25 1140 aa18.72■□□□□ 0.59
PHTF1-201ENST00000357783 CNNM1Q9NRU3 951 aa18.72■□□□□ 0.59
PHTF1-201ENST00000357783 ANKRD18BA2A2Z9 1011 aa18.71■□□□□ 0.59
PHTF1-201ENST00000357783 H3BQV1 296 aa18.71■□□□□ 0.59
PHTF1-201ENST00000357783 FOSBP53539 338 aa18.71■□□□□ 0.59
PHTF1-201ENST00000357783 IFFO2Q5TF58 517 aa18.71■□□□□ 0.59
PHTF1-201ENST00000357783 COL16A1Q07092 1604 aaPredicted RBP18.71■□□□□ 0.59
PHTF1-201ENST00000357783 ELP1O95163 1332 aa18.71■□□□□ 0.59
PHTF1-201ENST00000357783 HAND2P61296 217 aa18.71■□□□□ 0.59
PHTF1-201ENST00000357783 SPATA32Q96LK8 384 aa18.71■□□□□ 0.59
PHTF1-201ENST00000357783 MYH7P12883 1935 aa18.71■□□□□ 0.59
PHTF1-201ENST00000357783 PLCH1Q4KWH8 1693 aa18.71■□□□□ 0.58
PHTF1-201ENST00000357783 ROBO1Q9Y6N7 1651 aa18.71■□□□□ 0.58
PHTF1-201ENST00000357783 CCT2P78371 535 aaKnown RBP18.7■□□□□ 0.58
PHTF1-201ENST00000357783 DZIP3Q86Y13 1208 aaKnown RBP18.7■□□□□ 0.58
PHTF1-201ENST00000357783 ZFYP08048 801 aaPredicted RBP18.7■□□□□ 0.58
PHTF1-201ENST00000357783 NSUN7Q8NE18 718 aaKnown RBP18.7■□□□□ 0.58
PHTF1-201ENST00000357783 SCAND2PQ9GZW5 306 aaPredicted RBP18.7■□□□□ 0.58
PHTF1-201ENST00000357783 DOT1LQ8TEK3 1739 aa18.7■□□□□ 0.58
PHTF1-201ENST00000357783 FOXP2O15409 715 aa18.69■□□□□ 0.58
PHTF1-201ENST00000357783 LIG1P18858 919 aa18.69■□□□□ 0.58
PHTF1-201ENST00000357783 RESTQ13127 1097 aa18.69■□□□□ 0.58
PHTF1-201ENST00000357783 SMARCC2Q8TAQ2 1214 aa18.69■□□□□ 0.58
PHTF1-201ENST00000357783 LEO1Q8WVC0 666 aaPredicted RBP18.69■□□□□ 0.58
PHTF1-201ENST00000357783 NCOA5Q9HCD5 579 aaKnown RBP18.69■□□□□ 0.58
PHTF1-201ENST00000357783 NWD2Q9ULI1 1742 aa18.69■□□□□ 0.58
PHTF1-201ENST00000357783 NOL7Q9UMY1 257 aaKnown RBP18.69■□□□□ 0.58
PHTF1-201ENST00000357783 PPFIA3O75145 1194 aa18.69■□□□□ 0.58
PHTF1-201ENST00000357783 MCAMP43121 646 aa18.69■□□□□ 0.58
PHTF1-201ENST00000357783 LLPHQ9BRT6 129 aaKnown RBP18.69■□□□□ 0.58
PHTF1-201ENST00000357783 PUS7LQ9H0K6 701 aaKnown RBP18.69■□□□□ 0.58
PHTF1-201ENST00000357783 PTPDC1A2A3K4 754 aa18.68■□□□□ 0.58
PHTF1-201ENST00000357783 CTDNEP1O95476 244 aa18.68■□□□□ 0.58
PHTF1-201ENST00000357783 APPBP2Q92624 585 aa18.68■□□□□ 0.58
PHTF1-201ENST00000357783 FUCA2Q9BTY2 467 aa18.68■□□□□ 0.58
PHTF1-201ENST00000357783 AGXT2Q9BYV1 514 aa18.68■□□□□ 0.58
PHTF1-201ENST00000357783 EIF2AK3Q9NZJ5 1116 aaKnown RBP18.68■□□□□ 0.58
PHTF1-201ENST00000357783 USP25Q9UHP3 1055 aa18.68■□□□□ 0.58
PHTF1-201ENST00000357783 WNK3Q9BYP7 1800 aa18.68■□□□□ 0.58
PHTF1-201ENST00000357783 AKAP11Q9UKA4 1901 aa18.68■□□□□ 0.58
PHTF1-201ENST00000357783 UBN2Q6ZU65 1347 aa18.68■□□□□ 0.58
PHTF1-201ENST00000357783 GOLGA6L4A6NEF3 574 aa18.68■□□□□ 0.58
PHTF1-201ENST00000357783 UVSSAQ2YD98 709 aa18.68■□□□□ 0.58
PHTF1-201ENST00000357783 CCDC39Q9UFE4 941 aa18.68■□□□□ 0.58
PHTF1-201ENST00000357783 CTNNA3Q9UI47 895 aa18.67■□□□□ 0.58
PHTF1-201ENST00000357783 PTMAP06454 111 aaKnown RBP18.67■□□□□ 0.58
PHTF1-201ENST00000357783 IL6STP40189 918 aaPredicted RBP18.67■□□□□ 0.58
PHTF1-201ENST00000357783 GPHNQ9NQX3 736 aaPredicted RBP18.67■□□□□ 0.58
PHTF1-201ENST00000357783 ABCC12Q96J65 1359 aa18.66■□□□□ 0.58
PHTF1-201ENST00000357783 PDE8AO60658 829 aa18.66■□□□□ 0.58
PHTF1-201ENST00000357783 FGAP02671 866 aa18.66■□□□□ 0.58
PHTF1-201ENST00000357783 IMMTQ16891 758 aaKnown RBP18.66■□□□□ 0.58
PHTF1-201ENST00000357783 VGLL2Q8N8G2 317 aa18.66■□□□□ 0.58
PHTF1-201ENST00000357783 ERVV-1B6SEH8 477 aa18.66■□□□□ 0.58
PHTF1-201ENST00000357783 CAMK4Q16566 473 aa18.66■□□□□ 0.58
PHTF1-201ENST00000357783 NUP62CLQ9H1M0 184 aa18.66■□□□□ 0.58
PHTF1-201ENST00000357783 MYO5AQ9Y4I1 1855 aaKnown RBP18.66■□□□□ 0.58
PHTF1-201ENST00000357783 FAM177BA6PVY3 158 aa18.65■□□□□ 0.58
PHTF1-201ENST00000357783 GPAA1O43292 621 aa18.65■□□□□ 0.58
PHTF1-201ENST00000357783 ADAMTS2O95450 1211 aa18.65■□□□□ 0.58
PHTF1-201ENST00000357783 PDIA3P30101 505 aaKnown RBP18.65■□□□□ 0.58
PHTF1-201ENST00000357783 ZKSCAN5Q9Y2L8 839 aa18.65■□□□□ 0.58
PHTF1-201ENST00000357783 HMGN5P82970 282 aaKnown RBP18.65■□□□□ 0.58
PHTF1-201ENST00000357783 DDX24Q9GZR7 859 aaKnown RBP eCLIP18.65■□□□□ 0.58
PHTF1-201ENST00000357783 DACT1Q9NYF0 836 aa18.65■□□□□ 0.58
PHTF1-201ENST00000357783 COL22A1Q8NFW1 1626 aaPredicted RBP18.65■□□□□ 0.58
PHTF1-201ENST00000357783 PDE8BO95263 885 aa18.65■□□□□ 0.58
PHTF1-201ENST00000357783 HELBQ8NG08 1087 aaPredicted RBP18.65■□□□□ 0.58
PHTF1-201ENST00000357783 ACSBG1Q96GR2 724 aa18.65■□□□□ 0.58
PHTF1-201ENST00000357783 ZSCAN16Q9H4T2 348 aaPredicted RBP18.65■□□□□ 0.58
PHTF1-201ENST00000357783 CEBPZQ03701 1054 aaKnown RBP18.64■□□□□ 0.57
PHTF1-201ENST00000357783 ZNF34Q8IZ26 560 aa18.64■□□□□ 0.57
PHTF1-201ENST00000357783 PHKA1P46020 1223 aa18.64■□□□□ 0.57
PHTF1-201ENST00000357783 MAP3K11Q16584 847 aa18.64■□□□□ 0.57
PHTF1-201ENST00000357783 MPNDQ8N594 471 aa18.64■□□□□ 0.57
PHTF1-201ENST00000357783 BICD2Q8TD16 824 aa18.64■□□□□ 0.57
PHTF1-201ENST00000357783 ZNF274Q96GC6 653 aaPredicted RBP18.64■□□□□ 0.57
PHTF1-201ENST00000357783 PGBD1Q96JS3 809 aa18.64■□□□□ 0.57
PHTF1-201ENST00000357783 PIH1D3Q9NQM4 214 aaKnown RBP18.64■□□□□ 0.57
PHTF1-201ENST00000357783 MYH15Q9Y2K3 1946 aa18.63■□□□□ 0.57
PHTF1-201ENST00000357783 SLIT2O94813 1529 aa18.63■□□□□ 0.57
PHTF1-201ENST00000357783 IDH1O75874 414 aaKnown RBP18.63■□□□□ 0.57
PHTF1-201ENST00000357783 CCDC192P0DO97 292 aa18.63■□□□□ 0.57
PHTF1-201ENST00000357783 SLC9C2Q5TAH2 1124 aa18.63■□□□□ 0.57
PHTF1-201ENST00000357783 NAA16Q6N069 864 aaPredicted RBP18.63■□□□□ 0.57
PHTF1-201ENST00000357783 AHDC1Q5TGY3 1603 aaPredicted RBP18.63■□□□□ 0.57
PHTF1-201ENST00000357783 ADCY5O95622 1261 aa18.63■□□□□ 0.57
PHTF1-201ENST00000357783 GUCY1B3Q02153 619 aa18.63■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms