RNA–Protein interactions for RNA: ENST00000357559.8

FXR1-202, Transcript of FMR1 autosomal homolog 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene FXR1, Length 8,711 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FXR1-202ENST00000357559 IGSF3O75054 1194 aa11.92□□□□□ -0.5
FXR1-202ENST00000357559 DAPK3O43293 454 aa11.92□□□□□ -0.5
FXR1-202ENST00000357559 RFC1P35251 1148 aaPredicted RBP11.92□□□□□ -0.5
FXR1-202ENST00000357559 PRPF31Q8WWY3 499 aaKnown RBP11.92□□□□□ -0.5
FXR1-202ENST00000357559 CDC5LQ99459 802 aaKnown RBP11.92□□□□□ -0.5
FXR1-202ENST00000357559 CCDC77Q9BR77 488 aa11.92□□□□□ -0.5
FXR1-202ENST00000357559 ARFGAP3Q9NP61 516 aa11.92□□□□□ -0.5
FXR1-202ENST00000357559 TACC3Q9Y6A5 838 aa11.92□□□□□ -0.5
FXR1-202ENST00000357559 CSPG5O95196 566 aa11.92□□□□□ -0.5
FXR1-202ENST00000357559 CAPN2P17655 700 aa11.92□□□□□ -0.5
FXR1-202ENST00000357559 KANK3Q6NY19 840 aa11.92□□□□□ -0.5
FXR1-202ENST00000357559 STMN2Q93045 179 aa11.92□□□□□ -0.5
FXR1-202ENST00000357559 AFG3L2Q9Y4W6 797 aa11.92□□□□□ -0.5
FXR1-202ENST00000357559 VIMP08670 466 aaKnown RBP11.92□□□□□ -0.5
FXR1-202ENST00000357559 EVI5LQ96CN4 794 aa11.92□□□□□ -0.5
FXR1-202ENST00000357559 RXRAP19793 462 aa11.92□□□□□ -0.5
FXR1-202ENST00000357559 SPDYE3A6NKU9 549 aa11.92□□□□□ -0.5
FXR1-202ENST00000357559 ZSCAN23Q3MJ62 389 aa11.92□□□□□ -0.5
FXR1-202ENST00000357559 C20orf194Q5TEA3 1177 aa11.92□□□□□ -0.5
FXR1-202ENST00000357559 DDX19AQ9NUU7 478 aaKnown RBP11.92□□□□□ -0.5
FXR1-202ENST00000357559 KIF21BO75037 1637 aa11.92□□□□□ -0.5
FXR1-202ENST00000357559 GKAP1Q5VSY0 366 aaPredicted RBP11.91□□□□□ -0.5
FXR1-202ENST00000357559 NACA2Q9H009 215 aa11.91□□□□□ -0.5
FXR1-202ENST00000357559 CHMP2AO43633 222 aa11.91□□□□□ -0.5
FXR1-202ENST00000357559 CIB2O75838 187 aa11.91□□□□□ -0.5
FXR1-202ENST00000357559 WHAMMQ8TF30 809 aa11.91□□□□□ -0.5
FXR1-202ENST00000357559 NUDT16Q96DE0 195 aaKnown RBP11.91□□□□□ -0.5
FXR1-202ENST00000357559 TBC1D31Q96DN5 1066 aa11.91□□□□□ -0.5
FXR1-202ENST00000357559 BACH1O14867 736 aa11.91□□□□□ -0.5
FXR1-202ENST00000357559 USP37Q86T82 979 aa11.91□□□□□ -0.5
FXR1-202ENST00000357559 RPAP2Q8IXW5 612 aaPredicted RBP11.91□□□□□ -0.5
FXR1-202ENST00000357559 STMN4Q9H169 189 aaPredicted RBP11.91□□□□□ -0.5
FXR1-202ENST00000357559 ANXA1P04083 346 aa11.91□□□□□ -0.5
FXR1-202ENST00000357559 ATP2A2P16615 1042 aaKnown RBP11.91□□□□□ -0.5
FXR1-202ENST00000357559 SYT1P21579 422 aa11.91□□□□□ -0.5
FXR1-202ENST00000357559 RTN1Q16799 776 aa11.91□□□□□ -0.5
FXR1-202ENST00000357559 WDR66Q8TBY9 1149 aa11.91□□□□□ -0.5
FXR1-202ENST00000357559 SPOUT1Q5T280 376 aaKnown RBP11.91□□□□□ -0.5
FXR1-202ENST00000357559 GOLGA6L9A6NEM1 432 aa11.9□□□□□ -0.5
FXR1-202ENST00000357559 LRRC27Q9C0I9 530 aa11.9□□□□□ -0.5
FXR1-202ENST00000357559 KMT5BQ4FZB7 885 aa11.9□□□□□ -0.5
FXR1-202ENST00000357559 PPP1R12CQ9BZL4 782 aa11.9□□□□□ -0.5
FXR1-202ENST00000357559 NEK11Q8NG66 645 aa11.9□□□□□ -0.5
FXR1-202ENST00000357559 ZNF131P52739 623 aa11.9□□□□□ -0.5
FXR1-202ENST00000357559 OGFOD1Q8N543 542 aa11.9□□□□□ -0.5
FXR1-202ENST00000357559 PLEKHH1Q9ULM0 1364 aa11.9□□□□□ -0.5
FXR1-202ENST00000357559 EXOC5O00471 708 aa11.9□□□□□ -0.5
FXR1-202ENST00000357559 OPA1O60313 960 aa11.9□□□□□ -0.5
FXR1-202ENST00000357559 TACC1O75410 805 aa11.9□□□□□ -0.5
FXR1-202ENST00000357559 C6orf50Q9HD87 102 aa11.9□□□□□ -0.5
FXR1-202ENST00000357559 SAP30BPQ9UHR5 308 aaKnown RBP11.9□□□□□ -0.5
FXR1-202ENST00000357559 CCDC171Q6TFL3 1326 aa11.9□□□□□ -0.5
FXR1-202ENST00000357559 ANO3Q9BYT9 981 aa11.9□□□□□ -0.5
FXR1-202ENST00000357559 MCM5P33992 734 aa11.9□□□□□ -0.51
FXR1-202ENST00000357559 CCT6AP40227 531 aaKnown RBP11.9□□□□□ -0.51
FXR1-202ENST00000357559 TTC31Q49AM3 519 aaPredicted RBP11.9□□□□□ -0.51
FXR1-202ENST00000357559 ZNF569Q5MCW4 686 aa11.9□□□□□ -0.51
FXR1-202ENST00000357559 SH2D4BQ5SQS7 431 aa11.9□□□□□ -0.51
FXR1-202ENST00000357559 SDAD1Q9NVU7 687 aaKnown RBP eCLIP11.9□□□□□ -0.51
FXR1-202ENST00000357559 STIM2Q9P246 746 aa11.9□□□□□ -0.51
FXR1-202ENST00000357559 ANKFY1Q9P2R3 1169 aa11.9□□□□□ -0.51
FXR1-202ENST00000357559 GJA3Q9Y6H8 435 aa11.89□□□□□ -0.51
FXR1-202ENST00000357559 TXNDC9O14530 226 aa11.89□□□□□ -0.51
FXR1-202ENST00000357559 ZBTB43O43298 467 aa11.89□□□□□ -0.51
FXR1-202ENST00000357559 TNNI2P48788 182 aa11.89□□□□□ -0.51
FXR1-202ENST00000357559 INTS8Q75QN2 995 aaKnown RBP11.89□□□□□ -0.51
FXR1-202ENST00000357559 CCDC110Q8TBZ0 833 aa11.89□□□□□ -0.51
FXR1-202ENST00000357559 DDX27Q96GQ7 796 aaKnown RBP11.89□□□□□ -0.51
FXR1-202ENST00000357559 GSTO1P78417 241 aa11.89□□□□□ -0.51
FXR1-202ENST00000357559 Q6ZUG5 572 aa11.89□□□□□ -0.51
FXR1-202ENST00000357559 C10orf67Q8IYJ2 551 aa11.89□□□□□ -0.51
FXR1-202ENST00000357559 SKILP12757 684 aa11.89□□□□□ -0.51
FXR1-202ENST00000357559 LMOD1P29536 600 aaPredicted RBP11.89□□□□□ -0.51
FXR1-202ENST00000357559 PPP4R4Q6NUP7 873 aa11.89□□□□□ -0.51
FXR1-202ENST00000357559 SAMD15Q9P1V8 674 aa11.89□□□□□ -0.51
FXR1-202ENST00000357559 RAB3GAP1Q15042 981 aa11.89□□□□□ -0.51
FXR1-202ENST00000357559 INF2Q27J81 1249 aa11.89□□□□□ -0.51
FXR1-202ENST00000357559 MIGA1Q8NAN2 632 aa11.89□□□□□ -0.51
FXR1-202ENST00000357559 SSH1Q8WYL5 1049 aa11.89□□□□□ -0.51
FXR1-202ENST00000357559 PAXBP1Q9Y5B6 917 aa11.89□□□□□ -0.51
FXR1-202ENST00000357559 NEMFO60524 1076 aa11.89□□□□□ -0.51
FXR1-202ENST00000357559 GNL1P36915 607 aaPredicted RBP11.89□□□□□ -0.51
FXR1-202ENST00000357559 TBC1D9Q6ZT07 1266 aa11.89□□□□□ -0.51
FXR1-202ENST00000357559 ARHGEF2Q92974 986 aaKnown RBP11.89□□□□□ -0.51
FXR1-202ENST00000357559 TTC14Q96N46 770 aa11.89□□□□□ -0.51
FXR1-202ENST00000357559 DNAJC25Q9H1X3 360 aa11.89□□□□□ -0.51
FXR1-202ENST00000357559 DDX39AO00148 427 aaKnown RBP11.88□□□□□ -0.51
FXR1-202ENST00000357559 PPP1R42Q7Z4L9 355 aa11.88□□□□□ -0.51
FXR1-202ENST00000357559 FNBP4Q8N3X1 1017 aaPredicted RBP11.88□□□□□ -0.51
FXR1-202ENST00000357559 LEO1Q8WVC0 666 aaPredicted RBP11.88□□□□□ -0.51
FXR1-202ENST00000357559 FRMD4BQ9Y2L6 1034 aa11.88□□□□□ -0.51
FXR1-202ENST00000357559 FOXO3O43524 673 aa11.88□□□□□ -0.51
FXR1-202ENST00000357559 CASC4Q6P4E1 433 aa11.88□□□□□ -0.51
FXR1-202ENST00000357559 CTAGE1Q96RT6 745 aa11.88□□□□□ -0.51
FXR1-202ENST00000357559 NOD1Q9Y239 953 aa11.88□□□□□ -0.51
FXR1-202ENST00000357559 SETDB1Q15047 1291 aa11.88□□□□□ -0.51
FXR1-202ENST00000357559 CCDC122Q5T0U0 273 aa11.88□□□□□ -0.51
FXR1-202ENST00000357559 HDAC9Q9UKV0 1011 aa11.88□□□□□ -0.51
FXR1-202ENST00000357559 UBE2HP62256 183 aa11.88□□□□□ -0.51
FXR1-202ENST00000357559 ITIH3Q06033 890 aa11.88□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 82.5 ms