RNA–Protein interactions for RNA: ENST00000357412.2

LINC01560-201, Transcript of long intergenic non-protein coding RNA 1560, humanhuman

BASIC

Gene LINC01560, Length 1,253 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01560-201ENST00000357412 RGMBQ6NW40 437 aa13.08□□□□□ -0.32
LINC01560-201ENST00000357412 TXNRD3Q86VQ6 643 aa13.08□□□□□ -0.32
LINC01560-201ENST00000357412 C2orf69Q8N8R5 385 aa13.08□□□□□ -0.32
LINC01560-201ENST00000357412 LINS1Q8NG48 757 aa13.08□□□□□ -0.32
LINC01560-201ENST00000357412 MYOZ2Q9NPC6 264 aa13.08□□□□□ -0.32
LINC01560-201ENST00000357412 SPINK5Q9NQ38 1064 aaPredicted RBP13.08□□□□□ -0.32
LINC01560-201ENST00000357412 MED23Q9ULK4 1368 aa13.07□□□□□ -0.32
LINC01560-201ENST00000357412 ANP32CO43423 234 aa13.07□□□□□ -0.32
LINC01560-201ENST00000357412 ITGA6P23229 1130 aa13.07□□□□□ -0.32
LINC01560-201ENST00000357412 EXOSC9Q06265 439 aaKnown RBP13.07□□□□□ -0.32
LINC01560-201ENST00000357412 FAM161AQ3B820 660 aa13.07□□□□□ -0.32
LINC01560-201ENST00000357412 DACT2Q5SW24 774 aa13.07□□□□□ -0.32
LINC01560-201ENST00000357412 CDCA5Q96FF9 252 aa13.07□□□□□ -0.32
LINC01560-201ENST00000357412 MXD3Q9BW11 206 aa13.07□□□□□ -0.32
LINC01560-201ENST00000357412 COA1Q9GZY4 146 aa13.07□□□□□ -0.32
LINC01560-201ENST00000357412 LEMD3Q9Y2U8 911 aa13.07□□□□□ -0.32
LINC01560-201ENST00000357412 LRRC37AA6NMS7 1700 aa13.07□□□□□ -0.32
LINC01560-201ENST00000357412 KLRK1P26718 216 aa13.06□□□□□ -0.32
LINC01560-201ENST00000357412 STRIP1Q5VSL9 837 aa13.06□□□□□ -0.32
LINC01560-201ENST00000357412 CCDC102AQ96A19 550 aa13.06□□□□□ -0.32
LINC01560-201ENST00000357412 MYH16Q9H6N6 1097 aa13.06□□□□□ -0.32
LINC01560-201ENST00000357412 ANKRD36CQ5JPF3 1778 aa13.06□□□□□ -0.32
LINC01560-201ENST00000357412 DDX60Q8IY21 1712 aaKnown RBP13.05□□□□□ -0.32
LINC01560-201ENST00000357412 ZNF316A6NFI3 1004 aaPredicted RBP13.05□□□□□ -0.32
LINC01560-201ENST00000357412 ZEB1P37275 1124 aaPredicted RBP13.05□□□□□ -0.32
LINC01560-201ENST00000357412 ZNF157P51786 506 aaPredicted RBP13.05□□□□□ -0.32
LINC01560-201ENST00000357412 KIF23Q02241 960 aaPredicted RBP13.05□□□□□ -0.32
LINC01560-201ENST00000357412 BEND3Q5T5X7 828 aa13.05□□□□□ -0.32
LINC01560-201ENST00000357412 ANKRD2Q9GZV1 360 aa13.05□□□□□ -0.32
LINC01560-201ENST00000357412 ZNF804BA4D1E1 1349 aa13.05□□□□□ -0.32
LINC01560-201ENST00000357412 F6X3S4 739 aa13.04□□□□□ -0.32
LINC01560-201ENST00000357412 SLC10A3P09131 477 aa13.04□□□□□ -0.32
LINC01560-201ENST00000357412 CHRNDQ07001 517 aa13.04□□□□□ -0.32
LINC01560-201ENST00000357412 NBPF9Q3BBW0 867 aa13.04□□□□□ -0.32
LINC01560-201ENST00000357412 MPHOSPH8Q99549 860 aa13.04□□□□□ -0.32
LINC01560-201ENST00000357412 SCAF8Q9UPN6 1271 aaKnown RBP13.04□□□□□ -0.32
LINC01560-201ENST00000357412 PITPNM2Q9BZ72 1349 aa13.04□□□□□ -0.32
LINC01560-201ENST00000357412 SNAP23O00161 211 aa13.03□□□□□ -0.32
LINC01560-201ENST00000357412 WNT10BO00744 389 aa13.03□□□□□ -0.32
LINC01560-201ENST00000357412 FKBP1BP68106 108 aa13.03□□□□□ -0.32
LINC01560-201ENST00000357412 FOXO4P98177 505 aa13.03□□□□□ -0.32
LINC01560-201ENST00000357412 IRS2Q9Y4H2 1338 aa13.03□□□□□ -0.32
LINC01560-201ENST00000357412 THSD7BQ9C0I4 1608 aa13.02□□□□□ -0.32
LINC01560-201ENST00000357412 LAMB2P55268 1798 aa13.02□□□□□ -0.32
LINC01560-201ENST00000357412 ANKRD18BA2A2Z9 1011 aa13.02□□□□□ -0.33
LINC01560-201ENST00000357412 EPHA10Q5JZY3 1008 aa13.02□□□□□ -0.33
LINC01560-201ENST00000357412 PRAMEF18Q5VWM3 479 aa13.02□□□□□ -0.33
LINC01560-201ENST00000357412 TTLL5Q6EMB2 1281 aa13.02□□□□□ -0.33
LINC01560-201ENST00000357412 MOB2Q70IA6 237 aa13.02□□□□□ -0.33
LINC01560-201ENST00000357412 OGFOD1Q8N543 542 aa13.02□□□□□ -0.33
LINC01560-201ENST00000357412 FBXW7Q969H0 707 aa13.02□□□□□ -0.33
LINC01560-201ENST00000357412 CSRNP1Q96S65 589 aa13.02□□□□□ -0.33
LINC01560-201ENST00000357412 MCOLN1Q9GZU1 580 aa13.02□□□□□ -0.33
LINC01560-201ENST00000357412 RNF186Q9NXI6 227 aa13.02□□□□□ -0.33
LINC01560-201ENST00000357412 SAGE1Q9NXZ1 904 aa13.02□□□□□ -0.33
LINC01560-201ENST00000357412 MYO3BQ8WXR4 1341 aa13.02□□□□□ -0.33
LINC01560-201ENST00000357412 MMP14P50281 582 aa13.01□□□□□ -0.33
LINC01560-201ENST00000357412 GTF2IP78347 998 aa13.01□□□□□ -0.33
LINC01560-201ENST00000357412 IFIT5Q13325 482 aaKnown RBP13.01□□□□□ -0.33
LINC01560-201ENST00000357412 C15orf52Q6ZUT6 534 aaKnown RBP13.01□□□□□ -0.33
LINC01560-201ENST00000357412 RASAL3Q86YV0 1011 aa13.01□□□□□ -0.33
LINC01560-201ENST00000357412 ZBED3Q96IU2 234 aaPredicted RBP13.01□□□□□ -0.33
LINC01560-201ENST00000357412 CD209Q9NNX6 404 aa13.01□□□□□ -0.33
LINC01560-201ENST00000357412 CCDC85CA6NKD9 419 aa13□□□□□ -0.33
LINC01560-201ENST00000357412 TAF5LO75529 589 aa13□□□□□ -0.33
LINC01560-201ENST00000357412 KCNJ4P48050 445 aa13□□□□□ -0.33
LINC01560-201ENST00000357412 LMBR1LQ6UX01 489 aa13□□□□□ -0.33
LINC01560-201ENST00000357412 KIAA0825Q8IV33 1275 aa13□□□□□ -0.33
LINC01560-201ENST00000357412 HELBQ8NG08 1087 aaPredicted RBP13□□□□□ -0.33
LINC01560-201ENST00000357412 UBE2Q2LH0YL09 131 aa12.99□□□□□ -0.33
LINC01560-201ENST00000357412 GRM8O00222 908 aa12.99□□□□□ -0.33
LINC01560-201ENST00000357412 TRPA1O75762 1119 aa12.99□□□□□ -0.33
LINC01560-201ENST00000357412 SASH1O94885 1247 aa12.99□□□□□ -0.33
LINC01560-201ENST00000357412 FAM9BQ8IZU0 186 aa12.99□□□□□ -0.33
LINC01560-201ENST00000357412 CERS5Q8N5B7 392 aa12.99□□□□□ -0.33
LINC01560-201ENST00000357412 CHMP3Q9Y3E7 222 aa12.99□□□□□ -0.33
LINC01560-201ENST00000357412 TAF1P21675 1872 aa12.99□□□□□ -0.33
LINC01560-201ENST00000357412 ZNF521Q96K83 1311 aa12.98□□□□□ -0.33
LINC01560-201ENST00000357412 DGKZQ13574 1117 aa12.98□□□□□ -0.33
LINC01560-201ENST00000357412 REM2Q8IYK8 340 aaPredicted RBP12.98□□□□□ -0.33
LINC01560-201ENST00000357412 HDAC9Q9UKV0 1011 aa12.98□□□□□ -0.33
LINC01560-201ENST00000357412 ALDH1L1O75891 902 aa12.97□□□□□ -0.33
LINC01560-201ENST00000357412 IL1R1P14778 569 aa12.97□□□□□ -0.33
LINC01560-201ENST00000357412 RGS19P49795 217 aa12.97□□□□□ -0.33
LINC01560-201ENST00000357412 CCDC57Q2TAC2 916 aa12.97□□□□□ -0.33
LINC01560-201ENST00000357412 POTEDQ86YR6 584 aa12.97□□□□□ -0.33
LINC01560-201ENST00000357412 ZNF594Q96JF6 807 aaPredicted RBP12.97□□□□□ -0.33
LINC01560-201ENST00000357412 LDHAL6AQ6ZMR3 332 aa12.96□□□□□ -0.33
LINC01560-201ENST00000357412 APOBEC3FQ8IUX4 373 aaKnown RBP12.96□□□□□ -0.33
LINC01560-201ENST00000357412 MTMR14Q8NCE2 650 aa12.96□□□□□ -0.33
LINC01560-201ENST00000357412 KAZALD1Q96I82 304 aa12.96□□□□□ -0.33
LINC01560-201ENST00000357412 SUCLG2Q96I99 432 aa12.96□□□□□ -0.33
LINC01560-201ENST00000357412 SRCIN1Q9C0H9 1055 aa12.96□□□□□ -0.33
LINC01560-201ENST00000357412 C9orf78Q9NZ63 289 aaPredicted RBP12.96□□□□□ -0.33
LINC01560-201ENST00000357412 PCDHAC2Q9Y5I4 1007 aa12.96□□□□□ -0.33
LINC01560-201ENST00000357412 SCN9AQ15858 1988 aa12.95□□□□□ -0.34
LINC01560-201ENST00000357412 NF2P35240 595 aa12.95□□□□□ -0.34
LINC01560-201ENST00000357412 FKBP1AP62942 108 aaKnown RBP12.95□□□□□ -0.34
LINC01560-201ENST00000357412 TTLL12Q14166 644 aaPredicted RBP12.95□□□□□ -0.34
LINC01560-201ENST00000357412 DLGAP5Q15398 846 aa12.95□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms