RNA–Protein interactions for RNA: ENST00000356183.8

GTF3C1-201, Transcript of general transcription factor IIIC subunit 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene GTF3C1, Length 7,018 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-201ENST00000356183 KRT86O43790 486 aa12.48□□□□□ -0.41
GTF3C1-201ENST00000356183 GABPB1Q06547 395 aaPredicted RBP12.48□□□□□ -0.41
GTF3C1-201ENST00000356183 B4GALNT4Q76KP1 1039 aa12.48□□□□□ -0.41
GTF3C1-201ENST00000356183 DHX58Q96C10 678 aa12.48□□□□□ -0.41
GTF3C1-201ENST00000356183 MYRIPQ8NFW9 859 aa12.48□□□□□ -0.41
GTF3C1-201ENST00000356183 LMBR1Q8WVP7 490 aa12.48□□□□□ -0.41
GTF3C1-201ENST00000356183 LRRC27Q9C0I9 530 aa12.48□□□□□ -0.41
GTF3C1-201ENST00000356183 DACT1Q9NYF0 836 aa12.48□□□□□ -0.41
GTF3C1-201ENST00000356183 TROQ12816 1431 aaPredicted RBP12.48□□□□□ -0.41
GTF3C1-201ENST00000356183 TUBB4AP04350 444 aa12.48□□□□□ -0.41
GTF3C1-201ENST00000356183 SETSIPP0DME0 302 aa12.48□□□□□ -0.41
GTF3C1-201ENST00000356183 TAF7Q15545 349 aaPredicted RBP12.48□□□□□ -0.41
GTF3C1-201ENST00000356183 IFNKQ9P0W0 207 aa12.48□□□□□ -0.41
GTF3C1-201ENST00000356183 TXNDC9O14530 226 aa12.48□□□□□ -0.41
GTF3C1-201ENST00000356183 GMNNO75496 209 aa12.48□□□□□ -0.41
GTF3C1-201ENST00000356183 INPP5BP32019 993 aa12.48□□□□□ -0.41
GTF3C1-201ENST00000356183 ZC3H6P61129 1189 aaKnown RBP12.48□□□□□ -0.41
GTF3C1-201ENST00000356183 UTP14AQ9BVJ6 771 aaKnown RBP12.48□□□□□ -0.41
GTF3C1-201ENST00000356183 ABCC11Q96J66 1382 aa12.48□□□□□ -0.41
GTF3C1-201ENST00000356183 NUCB1Q02818 461 aa12.48□□□□□ -0.41
GTF3C1-201ENST00000356183 PSMD6Q15008 389 aa12.48□□□□□ -0.41
GTF3C1-201ENST00000356183 TTC22Q5TAA0 569 aa12.48□□□□□ -0.41
GTF3C1-201ENST00000356183 MFSD6Q6ZSS7 791 aa12.48□□□□□ -0.41
GTF3C1-201ENST00000356183 MAPKBP1O60336 1514 aa12.47□□□□□ -0.41
GTF3C1-201ENST00000356183 FCHSD2O94868 740 aa12.47□□□□□ -0.41
GTF3C1-201ENST00000356183 TYRO3Q06418 890 aa12.47□□□□□ -0.41
GTF3C1-201ENST00000356183 TXNDC16Q9P2K2 825 aa12.47□□□□□ -0.41
GTF3C1-201ENST00000356183 C9orf84Q5VXU9 1444 aa12.47□□□□□ -0.41
GTF3C1-201ENST00000356183 STX17P56962 302 aa12.47□□□□□ -0.41
GTF3C1-201ENST00000356183 VPS52Q8N1B4 723 aa12.47□□□□□ -0.41
GTF3C1-201ENST00000356183 IFT74Q96LB3 600 aa12.47□□□□□ -0.41
GTF3C1-201ENST00000356183 HECW1Q76N89 1606 aa12.47□□□□□ -0.41
GTF3C1-201ENST00000356183 TSPY2A6NKD2 308 aa12.47□□□□□ -0.41
GTF3C1-201ENST00000356183 EVCP57679 992 aa12.47□□□□□ -0.41
GTF3C1-201ENST00000356183 NCOA7Q8NI08 942 aa12.47□□□□□ -0.41
GTF3C1-201ENST00000356183 ALG1Q9BT22 464 aa12.47□□□□□ -0.41
GTF3C1-201ENST00000356183 VCX3BQ9H321 246 aa12.47□□□□□ -0.41
GTF3C1-201ENST00000356183 SUPT6HQ7KZ85 1726 aaKnown RBP12.47□□□□□ -0.41
GTF3C1-201ENST00000356183 AKNAD1Q5T1N1 836 aa12.47□□□□□ -0.41
GTF3C1-201ENST00000356183 PRG4Q92954 1404 aaPredicted RBP12.47□□□□□ -0.41
GTF3C1-201ENST00000356183 IFIT5Q13325 482 aaKnown RBP12.47□□□□□ -0.41
GTF3C1-201ENST00000356183 SUDS3Q9H7L9 328 aaPredicted RBP12.47□□□□□ -0.41
GTF3C1-201ENST00000356183 PCDHB15Q9Y5E8 787 aa12.47□□□□□ -0.41
GTF3C1-201ENST00000356183 TOPBP1Q92547 1522 aa12.47□□□□□ -0.41
GTF3C1-201ENST00000356183 VAV2P52735 878 aa12.47□□□□□ -0.41
GTF3C1-201ENST00000356183 TSGA10Q9BZW7 698 aa12.47□□□□□ -0.41
GTF3C1-201ENST00000356183 RABGAP1Q9Y3P9 1069 aa12.47□□□□□ -0.41
GTF3C1-201ENST00000356183 CRCPO75575 148 aa12.46□□□□□ -0.41
GTF3C1-201ENST00000356183 ALDH3A1P30838 453 aa12.46□□□□□ -0.41
GTF3C1-201ENST00000356183 RNASE9P60153 205 aaKnown RBP12.46□□□□□ -0.41
GTF3C1-201ENST00000356183 MRPS27Q92552 414 aaKnown RBP12.46□□□□□ -0.41
GTF3C1-201ENST00000356183 MTRF1LQ9UGC7 380 aaKnown RBP12.46□□□□□ -0.41
GTF3C1-201ENST00000356183 WHAMMQ8TF30 809 aa12.46□□□□□ -0.41
GTF3C1-201ENST00000356183 FAM212AQ96EL1 285 aa12.46□□□□□ -0.41
GTF3C1-201ENST00000356183 FAM169AQ9Y6X4 670 aa12.46□□□□□ -0.41
GTF3C1-201ENST00000356183 RTEL1-TNFRSF6BF6WH68 1400 aa12.46□□□□□ -0.42
GTF3C1-201ENST00000356183 KLF18A0A0U1RQI7 1052 aa12.46□□□□□ -0.42
GTF3C1-201ENST00000356183 HEATR3Q7Z4Q2 680 aa12.46□□□□□ -0.42
GTF3C1-201ENST00000356183 NEK11Q8NG66 645 aa12.46□□□□□ -0.42
GTF3C1-201ENST00000356183 HSPA1LP34931 641 aa12.46□□□□□ -0.42
GTF3C1-201ENST00000356183 ASIC1P78348 528 aa12.46□□□□□ -0.42
GTF3C1-201ENST00000356183 FYB2Q5VWT5 728 aa12.46□□□□□ -0.42
GTF3C1-201ENST00000356183 CCDC110Q8TBZ0 833 aa12.46□□□□□ -0.42
GTF3C1-201ENST00000356183 ATP2A2P16615 1042 aaKnown RBP12.45□□□□□ -0.42
GTF3C1-201ENST00000356183 USHBP1Q8N6Y0 703 aa12.45□□□□□ -0.42
GTF3C1-201ENST00000356183 PFDN4Q9NQP4 134 aa12.45□□□□□ -0.42
GTF3C1-201ENST00000356183 SNRKQ9NRH2 765 aa12.45□□□□□ -0.42
GTF3C1-201ENST00000356183 FAM13AO94988 1023 aa12.45□□□□□ -0.42
GTF3C1-201ENST00000356183 SEC24BO95487 1268 aa12.45□□□□□ -0.42
GTF3C1-201ENST00000356183 STARD3NLO95772 234 aa12.45□□□□□ -0.42
GTF3C1-201ENST00000356183 IRX5P78411 483 aaPredicted RBP12.45□□□□□ -0.42
GTF3C1-201ENST00000356183 Q6ZUG5 572 aa12.45□□□□□ -0.42
GTF3C1-201ENST00000356183 KCNG4Q8TDN1 519 aa12.45□□□□□ -0.42
GTF3C1-201ENST00000356183 NKIRAS1Q9NYS0 192 aa12.45□□□□□ -0.42
GTF3C1-201ENST00000356183 PPP1R21Q6ZMI0 780 aa12.45□□□□□ -0.42
GTF3C1-201ENST00000356183 CCDC42Q96M95 316 aa12.45□□□□□ -0.42
GTF3C1-201ENST00000356183 DIXDC1Q155Q3 683 aa12.45□□□□□ -0.42
GTF3C1-201ENST00000356183 GEN1Q17RS7 908 aa12.45□□□□□ -0.42
GTF3C1-201ENST00000356183 CCDC122Q5T0U0 273 aa12.45□□□□□ -0.42
GTF3C1-201ENST00000356183 LRRC43Q8N309 656 aa12.45□□□□□ -0.42
GTF3C1-201ENST00000356183 WDR70Q9NW82 654 aa12.45□□□□□ -0.42
GTF3C1-201ENST00000356183 PTCD1O75127 700 aaKnown RBP12.45□□□□□ -0.42
GTF3C1-201ENST00000356183 MCM7P33993 719 aa12.45□□□□□ -0.42
GTF3C1-201ENST00000356183 MAK16Q9BXY0 300 aaKnown RBP12.45□□□□□ -0.42
GTF3C1-201ENST00000356183 RBSNQ9H1K0 784 aa12.45□□□□□ -0.42
GTF3C1-201ENST00000356183 SNX16P57768 344 aa12.44□□□□□ -0.42
GTF3C1-201ENST00000356183 POTEDQ86YR6 584 aa12.44□□□□□ -0.42
GTF3C1-201ENST00000356183 NDUFAB1O14561 156 aa12.44□□□□□ -0.42
GTF3C1-201ENST00000356183 TTLL12Q14166 644 aaPredicted RBP12.44□□□□□ -0.42
GTF3C1-201ENST00000356183 STK38LQ9Y2H1 464 aa12.44□□□□□ -0.42
GTF3C1-201ENST00000356183 F13A1P00488 732 aa12.44□□□□□ -0.42
GTF3C1-201ENST00000356183 TNNC1P63316 161 aa12.44□□□□□ -0.42
GTF3C1-201ENST00000356183 FMNL3Q8IVF7 1028 aa12.44□□□□□ -0.42
GTF3C1-201ENST00000356183 CCT6BQ92526 530 aa12.44□□□□□ -0.42
GTF3C1-201ENST00000356183 ZNF692Q9BU19 519 aaPredicted RBP12.44□□□□□ -0.42
GTF3C1-201ENST00000356183 TCEANC2Q96MN5 208 aa12.44□□□□□ -0.42
GTF3C1-201ENST00000356183 GOLGA6CA6NDK9 693 aa12.44□□□□□ -0.42
GTF3C1-201ENST00000356183 GOLGA6DP0CG33 693 aa12.44□□□□□ -0.42
GTF3C1-201ENST00000356183 NUF2Q9BZD4 464 aa12.44□□□□□ -0.42
GTF3C1-201ENST00000356183 GOLGA6AQ9NYA3 693 aa12.44□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms