RNA–Protein interactions for RNA: ENST00000355815.8

SREBF1-202, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SREBF1, Length 4,253 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-202ENST00000355815 KIF24Q5T7B8 1368 aa16.27■□□□□ 0.2
SREBF1-202ENST00000355815 PLEKHG1Q9ULL1 1385 aa16.27■□□□□ 0.2
SREBF1-202ENST00000355815 CCDC69A6NI79 296 aa16.27■□□□□ 0.2
SREBF1-202ENST00000355815 NRXN1Q9ULB1 1477 aa16.27■□□□□ 0.19
SREBF1-202ENST00000355815 DNA2P51530 1060 aa16.27■□□□□ 0.19
SREBF1-202ENST00000355815 LRRC24Q50LG9 513 aa16.27■□□□□ 0.19
SREBF1-202ENST00000355815 HS1BP3Q53T59 392 aa16.27■□□□□ 0.19
SREBF1-202ENST00000355815 ZNF526Q8TF50 670 aaPredicted RBP16.27■□□□□ 0.19
SREBF1-202ENST00000355815 NAPBQ9H115 298 aa16.27■□□□□ 0.19
SREBF1-202ENST00000355815 LMTK2Q8IWU2 1503 aa16.27■□□□□ 0.19
SREBF1-202ENST00000355815 GNG11P61952 73 aa16.26■□□□□ 0.19
SREBF1-202ENST00000355815 CRACR2AQ9BSW2 395 aa16.26■□□□□ 0.19
SREBF1-202ENST00000355815 BCL2L12Q9HB09 334 aa16.26■□□□□ 0.19
SREBF1-202ENST00000355815 NPHP3Q7Z494 1330 aa16.26■□□□□ 0.19
SREBF1-202ENST00000355815 KIF20AO95235 890 aa16.26■□□□□ 0.19
SREBF1-202ENST00000355815 DBNLQ9UJU6 430 aaKnown RBP16.26■□□□□ 0.19
SREBF1-202ENST00000355815 AKAP2Q9Y2D5 859 aa16.26■□□□□ 0.19
SREBF1-202ENST00000355815 TYRO3Q06418 890 aa16.26■□□□□ 0.19
SREBF1-202ENST00000355815 MYRIPQ8NFW9 859 aa16.26■□□□□ 0.19
SREBF1-202ENST00000355815 GIMAP7Q8NHV1 300 aa16.26■□□□□ 0.19
SREBF1-202ENST00000355815 PUS3Q9BZE2 481 aaKnown RBP16.26■□□□□ 0.19
SREBF1-202ENST00000355815 FAM107BQ9H098 131 aa16.26■□□□□ 0.19
SREBF1-202ENST00000355815 RPS6KB1P23443 525 aa16.25■□□□□ 0.19
SREBF1-202ENST00000355815 MYO3AQ8NEV4 1616 aa16.25■□□□□ 0.19
SREBF1-202ENST00000355815 PTPDC1A2A3K4 754 aa16.25■□□□□ 0.19
SREBF1-202ENST00000355815 ATP2B3Q16720 1220 aa16.25■□□□□ 0.19
SREBF1-202ENST00000355815 PHKG2P15735 406 aa16.25■□□□□ 0.19
SREBF1-202ENST00000355815 UVSSAQ2YD98 709 aa16.25■□□□□ 0.19
SREBF1-202ENST00000355815 SMARCE1Q969G3 411 aa16.25■□□□□ 0.19
SREBF1-202ENST00000355815 CD163L1Q9NR16 1453 aa16.25■□□□□ 0.19
SREBF1-202ENST00000355815 ANKRD18BA2A2Z9 1011 aa16.25■□□□□ 0.19
SREBF1-202ENST00000355815 IFIT3O14879 490 aaKnown RBP16.25■□□□□ 0.19
SREBF1-202ENST00000355815 HOXB7P09629 217 aa16.25■□□□□ 0.19
SREBF1-202ENST00000355815 SART3Q15020 963 aaKnown RBP16.25■□□□□ 0.19
SREBF1-202ENST00000355815 DNAJC10Q8IXB1 793 aa16.25■□□□□ 0.19
SREBF1-202ENST00000355815 ANO10Q9NW15 660 aa16.25■□□□□ 0.19
SREBF1-202ENST00000355815 HMG20BQ9P0W2 317 aa16.25■□□□□ 0.19
SREBF1-202ENST00000355815 JAG2Q9Y219 1238 aa16.25■□□□□ 0.19
SREBF1-202ENST00000355815 PAXBP1Q9Y5B6 917 aa16.25■□□□□ 0.19
SREBF1-202ENST00000355815 NLRP1Q9C000 1473 aa16.24■□□□□ 0.19
SREBF1-202ENST00000355815 DIP2CQ9Y2E4 1556 aa16.24■□□□□ 0.19
SREBF1-202ENST00000355815 TOP1P11387 765 aaKnown RBP16.24■□□□□ 0.19
SREBF1-202ENST00000355815 SAMD1Q6SPF0 538 aaPredicted RBP16.24■□□□□ 0.19
SREBF1-202ENST00000355815 PIK3C2BO00750 1634 aa16.24■□□□□ 0.19
SREBF1-202ENST00000355815 KIF2AO00139 706 aaPredicted RBP16.24■□□□□ 0.19
SREBF1-202ENST00000355815 IL15P40933 162 aaPredicted RBP16.24■□□□□ 0.19
SREBF1-202ENST00000355815 TICAM2Q86XR7 235 aa16.24■□□□□ 0.19
SREBF1-202ENST00000355815 ZKSCAN3Q9BRR0 538 aa16.24■□□□□ 0.19
SREBF1-202ENST00000355815 MTMR6Q9Y217 621 aa16.24■□□□□ 0.19
SREBF1-202ENST00000355815 A0A1B0GVL5 298 aa16.23■□□□□ 0.19
SREBF1-202ENST00000355815 ODF2Q5BJF6 829 aa16.23■□□□□ 0.19
SREBF1-202ENST00000355815 FAM200AQ8TCP9 573 aa16.23■□□□□ 0.19
SREBF1-202ENST00000355815 BABAM1Q9NWV8 329 aa16.23■□□□□ 0.19
SREBF1-202ENST00000355815 RNF187Q5TA31 235 aaPredicted RBP16.23■□□□□ 0.19
SREBF1-202ENST00000355815 OGFRQ9NZT2 677 aa16.23■□□□□ 0.19
SREBF1-202ENST00000355815 EPB41L2O43491 1005 aaKnown RBP16.23■□□□□ 0.19
SREBF1-202ENST00000355815 CASQ1P31415 396 aa16.23■□□□□ 0.19
SREBF1-202ENST00000355815 USP8P40818 1118 aa16.23■□□□□ 0.19
SREBF1-202ENST00000355815 TTC6Q86TZ1 520 aa16.23■□□□□ 0.19
SREBF1-202ENST00000355815 MIGA1Q8NAN2 632 aa16.23■□□□□ 0.19
SREBF1-202ENST00000355815 EXOC5O00471 708 aa16.22■□□□□ 0.19
SREBF1-202ENST00000355815 IGKV5-2P06315 115 aa16.22■□□□□ 0.19
SREBF1-202ENST00000355815 PI16Q6UXB8 463 aa16.22■□□□□ 0.19
SREBF1-202ENST00000355815 DHX32Q7L7V1 743 aaKnown RBP16.22■□□□□ 0.19
SREBF1-202ENST00000355815 FTOQ9C0B1 505 aaKnown RBP eCLIP16.22■□□□□ 0.191e-6■■■■■ 30.7
SREBF1-202ENST00000355815 CFAP74Q9C0B2 1584 aa16.22■□□□□ 0.19
SREBF1-202ENST00000355815 PRC1O43663 620 aa16.22■□□□□ 0.19
SREBF1-202ENST00000355815 TAX1BP1Q86VP1 789 aa16.22■□□□□ 0.19
SREBF1-202ENST00000355815 CCDC24Q8N4L8 307 aa16.22■□□□□ 0.19
SREBF1-202ENST00000355815 UBAC1Q9BSL1 405 aa16.22■□□□□ 0.19
SREBF1-202ENST00000355815 MYL10Q9BUA6 226 aa16.22■□□□□ 0.19
SREBF1-202ENST00000355815 DDX19AQ9NUU7 478 aaKnown RBP16.22■□□□□ 0.19
SREBF1-202ENST00000355815 G3V3G9 751 aa16.22■□□□□ 0.19
SREBF1-202ENST00000355815 RANBP6O60518 1105 aaKnown RBP16.22■□□□□ 0.19
SREBF1-202ENST00000355815 DCAF8Q5TAQ9 597 aa16.22■□□□□ 0.19
SREBF1-202ENST00000355815 SLU7O95391 586 aaKnown RBP16.22■□□□□ 0.19
SREBF1-202ENST00000355815 IL2RBP14784 551 aa16.22■□□□□ 0.19
SREBF1-202ENST00000355815 CAPN2P17655 700 aa16.22■□□□□ 0.19
SREBF1-202ENST00000355815 CCDC181Q5TID7 509 aa16.22■□□□□ 0.19
SREBF1-202ENST00000355815 TRIM22Q8IYM9 498 aa16.22■□□□□ 0.19
SREBF1-202ENST00000355815 HMGB1P09429 215 aaKnown RBP16.21■□□□□ 0.19
SREBF1-202ENST00000355815 SYT10Q6XYQ8 523 aa16.21■□□□□ 0.19
SREBF1-202ENST00000355815 PLBD2Q8NHP8 589 aa16.21■□□□□ 0.19
SREBF1-202ENST00000355815 SMARCC1Q92922 1105 aaPredicted RBP16.21■□□□□ 0.19
SREBF1-202ENST00000355815 NACAP1Q9BZK3 213 aa16.21■□□□□ 0.19
SREBF1-202ENST00000355815 TAF5LO75529 589 aa16.21■□□□□ 0.19
SREBF1-202ENST00000355815 SLC26A6Q9BXS9 759 aa16.21■□□□□ 0.19
SREBF1-202ENST00000355815 CRB1P82279 1406 aa16.21■□□□□ 0.19
SREBF1-202ENST00000355815 EYA2O00167 538 aa16.21■□□□□ 0.18
SREBF1-202ENST00000355815 TMEM67Q5HYA8 995 aa16.21■□□□□ 0.18
SREBF1-202ENST00000355815 FRMPD1Q5SYB0 1578 aa16.21■□□□□ 0.18
SREBF1-202ENST00000355815 CUL4AQ13619 759 aa16.2■□□□□ 0.18
SREBF1-202ENST00000355815 CCDC12Q8WUD4 166 aaPredicted RBP16.2■□□□□ 0.18
SREBF1-202ENST00000355815 MED14O60244 1454 aa16.2■□□□□ 0.18
SREBF1-202ENST00000355815 RNF113AO15541 343 aaKnown RBP16.2■□□□□ 0.18
SREBF1-202ENST00000355815 ATP2C2O75185 946 aa16.2■□□□□ 0.18
SREBF1-202ENST00000355815 GOLGA8AA7E2F4 631 aa16.2■□□□□ 0.18
SREBF1-202ENST00000355815 IGHMBP2P38935 993 aaKnown RBP16.2■□□□□ 0.18
SREBF1-202ENST00000355815 POLA2Q14181 598 aa16.2■□□□□ 0.18
SREBF1-202ENST00000355815 ELF2Q15723 593 aa16.2■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms