RNA–Protein interactions for RNA: ENST00000355572.6

PDLIM7-201, Transcript of PDZ and LIM domain 7, humanhuman

TSL 1 (best) BASIC

Gene PDLIM7, Length 977 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-201ENST00000355572 PUS3Q9BZE2 481 aaKnown RBP21.21■□□□□ 0.99
PDLIM7-201ENST00000355572 C9orf78Q9NZ63 289 aaPredicted RBP21.21■□□□□ 0.99
PDLIM7-201ENST00000355572 ADM5C9JUS6 153 aa21.2■□□□□ 0.98
PDLIM7-201ENST00000355572 IFIT5Q13325 482 aaKnown RBP21.2■□□□□ 0.98
PDLIM7-201ENST00000355572 KIF4BQ2VIQ3 1234 aa21.2■□□□□ 0.98
PDLIM7-201ENST00000355572 DACT2Q5SW24 774 aa21.2■□□□□ 0.98
PDLIM7-201ENST00000355572 ANKRD44Q8N8A2 993 aa21.2■□□□□ 0.98
PDLIM7-201ENST00000355572 ZC3H15Q8WU90 426 aaKnown RBP21.2■□□□□ 0.98
PDLIM7-201ENST00000355572 ABT1Q9ULW3 272 aaKnown RBP21.2■□□□□ 0.98
PDLIM7-201ENST00000355572 LEMD3Q9Y2U8 911 aa21.2■□□□□ 0.98
PDLIM7-201ENST00000355572 USP17L3A6NCW0 530 aa21.19■□□□□ 0.98
PDLIM7-201ENST00000355572 USP17L4A6NCW7 530 aa21.19■□□□□ 0.98
PDLIM7-201ENST00000355572 CELF2O95319 508 aaKnown RBP21.19■□□□□ 0.98
PDLIM7-201ENST00000355572 ZNF280AP59817 542 aaPredicted RBP21.19■□□□□ 0.98
PDLIM7-201ENST00000355572 DEFB115Q30KQ5 88 aa21.19■□□□□ 0.98
PDLIM7-201ENST00000355572 USP17L1Q7RTZ2 530 aa21.19■□□□□ 0.98
PDLIM7-201ENST00000355572 PODNQ7Z5L7 613 aa21.19■□□□□ 0.98
PDLIM7-201ENST00000355572 BICC1Q9H694 974 aaKnown RBP21.19■□□□□ 0.98
PDLIM7-201ENST00000355572 SCAF8Q9UPN6 1271 aaKnown RBP21.19■□□□□ 0.98
PDLIM7-201ENST00000355572 TLL2Q9Y6L7 1015 aa21.18■□□□□ 0.98
PDLIM7-201ENST00000355572 PTPRCP08575 1304 aa21.18■□□□□ 0.98
PDLIM7-201ENST00000355572 CYP4F22Q6NT55 531 aa21.17■□□□□ 0.98
PDLIM7-201ENST00000355572 AGBL3Q8NEM8 1001 aa21.17■□□□□ 0.98
PDLIM7-201ENST00000355572 ANKRD2Q9GZV1 360 aa21.17■□□□□ 0.98
PDLIM7-201ENST00000355572 USP44Q9H0E7 712 aa21.17■□□□□ 0.98
PDLIM7-201ENST00000355572 ZNF408Q9H9D4 720 aa21.17■□□□□ 0.98
PDLIM7-201ENST00000355572 SMC4Q9NTJ3 1288 aa21.17■□□□□ 0.98
PDLIM7-201ENST00000355572 GGA3Q9NZ52 723 aa21.17■□□□□ 0.98
PDLIM7-201ENST00000355572 ECM29Q5VYK3 1845 aa21.16■□□□□ 0.98
PDLIM7-201ENST00000355572 WDR33Q9C0J8 1336 aaKnown RBP21.16■□□□□ 0.98
PDLIM7-201ENST00000355572 FOXN1O15353 648 aa21.16■□□□□ 0.98
PDLIM7-201ENST00000355572 ALDH1L2Q3SY69 923 aa21.16■□□□□ 0.98
PDLIM7-201ENST00000355572 RABL6Q3YEC7 729 aaPredicted RBP21.16■□□□□ 0.98
PDLIM7-201ENST00000355572 CDC37L1Q7L3B6 337 aa21.16■□□□□ 0.98
PDLIM7-201ENST00000355572 COA1Q9GZY4 146 aa21.16■□□□□ 0.98
PDLIM7-201ENST00000355572 ARAP2Q8WZ64 1704 aa21.15■□□□□ 0.98
PDLIM7-201ENST00000355572 PLIN1O60240 522 aa21.15■□□□□ 0.98
PDLIM7-201ENST00000355572 SAPCD2Q86UD0 394 aa21.15■□□□□ 0.98
PDLIM7-201ENST00000355572 KLHDC4Q8TBB5 520 aa21.15■□□□□ 0.98
PDLIM7-201ENST00000355572 FBXW7Q969H0 707 aa21.15■□□□□ 0.98
PDLIM7-201ENST00000355572 CD209Q9NNX6 404 aa21.15■□□□□ 0.98
PDLIM7-201ENST00000355572 CCDC57Q2TAC2 916 aa21.14■□□□□ 0.97
PDLIM7-201ENST00000355572 LDHAL6AQ6ZMR3 332 aa21.14■□□□□ 0.97
PDLIM7-201ENST00000355572 KRT26Q7Z3Y9 468 aa21.14■□□□□ 0.97
PDLIM7-201ENST00000355572 CERS5Q8N5B7 392 aa21.14■□□□□ 0.97
PDLIM7-201ENST00000355572 TNNQ9UQP3 1299 aa21.14■□□□□ 0.97
PDLIM7-201ENST00000355572 AOC2O75106 756 aa21.13■□□□□ 0.97
PDLIM7-201ENST00000355572 USP17L8P0C7I0 530 aa21.13■□□□□ 0.97
PDLIM7-201ENST00000355572 GTF2IP78347 998 aa21.13■□□□□ 0.97
PDLIM7-201ENST00000355572 GRM1Q13255 1194 aa21.13■□□□□ 0.97
PDLIM7-201ENST00000355572 SCARF1Q14162 830 aa21.13■□□□□ 0.97
PDLIM7-201ENST00000355572 NBPF9Q3BBW0 867 aa21.13■□□□□ 0.97
PDLIM7-201ENST00000355572 LRRC24Q50LG9 513 aa21.13■□□□□ 0.97
PDLIM7-201ENST00000355572 IFFO2Q5TF58 517 aa21.13■□□□□ 0.97
PDLIM7-201ENST00000355572 ANGEL2Q5VTE6 544 aaKnown RBP21.13■□□□□ 0.97
PDLIM7-201ENST00000355572 C15orf52Q6ZUT6 534 aaKnown RBP21.13■□□□□ 0.97
PDLIM7-201ENST00000355572 CAPNS2Q96L46 248 aa21.13■□□□□ 0.97
PDLIM7-201ENST00000355572 MYOZ2Q9NPC6 264 aa21.13■□□□□ 0.97
PDLIM7-201ENST00000355572 NOB1Q9ULX3 412 aaKnown RBP21.13■□□□□ 0.97
PDLIM7-201ENST00000355572 JAG2Q9Y219 1238 aa21.13■□□□□ 0.97
PDLIM7-201ENST00000355572 PCDHAC2Q9Y5I4 1007 aa21.13■□□□□ 0.97
PDLIM7-201ENST00000355572 KCNJ4P48050 445 aa21.12■□□□□ 0.97
PDLIM7-201ENST00000355572 STRIP1Q5VSL9 837 aa21.12■□□□□ 0.97
PDLIM7-201ENST00000355572 DIEXFQ68CQ4 756 aaKnown RBP21.12■□□□□ 0.97
PDLIM7-201ENST00000355572 ZIC5Q96T25 663 aa21.12■□□□□ 0.97
PDLIM7-201ENST00000355572 CNNM1Q9NRU3 951 aa21.12■□□□□ 0.97
PDLIM7-201ENST00000355572 RIPOR2Q9Y4F9 1068 aa21.12■□□□□ 0.97
PDLIM7-201ENST00000355572 RARSP54136 660 aaKnown RBP21.11■□□□□ 0.97
PDLIM7-201ENST00000355572 WBP1LQ9NX94 342 aa21.11■□□□□ 0.97
PDLIM7-201ENST00000355572 AOX1Q06278 1338 aa21.1■□□□□ 0.97
PDLIM7-201ENST00000355572 RFX5P48382 616 aaPredicted RBP21.1■□□□□ 0.97
PDLIM7-201ENST00000355572 TAF7LQ5H9L4 462 aa21.1■□□□□ 0.97
PDLIM7-201ENST00000355572 TTLL5Q6EMB2 1281 aa21.1■□□□□ 0.97
PDLIM7-201ENST00000355572 PAXIP1Q6ZW49 1069 aaPredicted RBP21.1■□□□□ 0.97
PDLIM7-201ENST00000355572 KIAA0825Q8IV33 1275 aa21.1■□□□□ 0.97
PDLIM7-201ENST00000355572 DCPSQ96C86 337 aaKnown RBP21.1■□□□□ 0.97
PDLIM7-201ENST00000355572 MYH13Q9UKX3 1938 aa21.1■□□□□ 0.97
PDLIM7-201ENST00000355572 SASH1O94885 1247 aa21.09■□□□□ 0.97
PDLIM7-201ENST00000355572 PRAMEF18Q5VWM3 479 aa21.09■□□□□ 0.97
PDLIM7-201ENST00000355572 WNT10BO00744 389 aa21.08■□□□□ 0.97
PDLIM7-201ENST00000355572 IL1R1P14778 569 aa21.08■□□□□ 0.97
PDLIM7-201ENST00000355572 GYG1P46976 350 aa21.08■□□□□ 0.97
PDLIM7-201ENST00000355572 BRPF1P55201 1214 aaPredicted RBP21.08■□□□□ 0.97
PDLIM7-201ENST00000355572 VGLL2Q8N8G2 317 aa21.08■□□□□ 0.97
PDLIM7-201ENST00000355572 CDCA5Q96FF9 252 aa21.08■□□□□ 0.97
PDLIM7-201ENST00000355572 ZBED3Q96IU2 234 aaPredicted RBP21.08■□□□□ 0.97
PDLIM7-201ENST00000355572 PAPPA2Q9BXP8 1791 aa21.06■□□□□ 0.96
PDLIM7-201ENST00000355572 CT47B1P0C2W7 299 aaPredicted RBP21.06■□□□□ 0.96
PDLIM7-201ENST00000355572 FAM84BQ96KN1 310 aaPredicted RBP21.06■□□□□ 0.96
PDLIM7-201ENST00000355572 GBA2Q9HCG7 927 aaPredicted RBP21.06■□□□□ 0.96
PDLIM7-201ENST00000355572 BCAR3O75815 825 aa21.05■□□□□ 0.96
PDLIM7-201ENST00000355572 HUNKP57058 714 aa21.05■□□□□ 0.96
PDLIM7-201ENST00000355572 GRIK5Q16478 980 aa21.05■□□□□ 0.96
PDLIM7-201ENST00000355572 MOB2Q70IA6 237 aa21.05■□□□□ 0.96
PDLIM7-201ENST00000355572 SULF1Q8IWU6 871 aa21.05■□□□□ 0.96
PDLIM7-201ENST00000355572 MEIS3Q99687 375 aa21.05■□□□□ 0.96
PDLIM7-201ENST00000355572 MYO3BQ8WXR4 1341 aa21.04■□□□□ 0.96
PDLIM7-201ENST00000355572 FAM155AB1AL88 458 aaPredicted RBP21.04■□□□□ 0.96
PDLIM7-201ENST00000355572 F8W031 263 aaPredicted RBP21.04■□□□□ 0.96
PDLIM7-201ENST00000355572 HSPA8P11142 646 aaKnown RBP21.04■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 51.6 ms