RNA–Protein interactions for RNA: ENST00000355497.9

LMX1B-201, Transcript of LIM homeobox transcription factor 1 beta, humanhuman

TSL 1 (best) BASIC

Gene LMX1B, Length 5,809 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMX1B-201ENST00000355497 GTPBP4Q9BZE4 634 aaKnown RBP16.84■□□□□ 0.29
LMX1B-201ENST00000355497 KCNK9Q9NPC2 374 aa16.84■□□□□ 0.29
LMX1B-201ENST00000355497 RBM8AQ9Y5S9 174 aaKnown RBP16.84■□□□□ 0.29
LMX1B-201ENST00000355497 EXOC5O00471 708 aa16.84■□□□□ 0.29
LMX1B-201ENST00000355497 CLCN1P35523 988 aa16.84■□□□□ 0.29
LMX1B-201ENST00000355497 ST5P78524 1137 aa16.84■□□□□ 0.29
LMX1B-201ENST00000355497 MSANTD4Q8NCY6 345 aa16.84■□□□□ 0.29
LMX1B-201ENST00000355497 GUCA1BQ9UMX6 200 aa16.84■□□□□ 0.29
LMX1B-201ENST00000355497 PI4KAP2A4QPH2 592 aa16.83■□□□□ 0.29
LMX1B-201ENST00000355497 PPP1R7Q15435 360 aa16.83■□□□□ 0.29
LMX1B-201ENST00000355497 IFNL2Q8IZJ0 200 aa16.83■□□□□ 0.29
LMX1B-201ENST00000355497 PI4KAP1Q8N8J0 262 aa16.83■□□□□ 0.29
LMX1B-201ENST00000355497 EPRSP07814 1512 aaKnown RBP16.83■□□□□ 0.29
LMX1B-201ENST00000355497 CALM1P0DP23 149 aa16.83■□□□□ 0.29
LMX1B-201ENST00000355497 CALM2P0DP24 149 aa16.83■□□□□ 0.29
LMX1B-201ENST00000355497 CALM3P0DP25 149 aa16.83■□□□□ 0.29
LMX1B-201ENST00000355497 SDSP20132 328 aa16.83■□□□□ 0.29
LMX1B-201ENST00000355497 CCDC14Q49A88 953 aa16.83■□□□□ 0.29
LMX1B-201ENST00000355497 MCMDC2Q4G0Z9 681 aa16.83■□□□□ 0.29
LMX1B-201ENST00000355497 C6orf50Q9HD87 102 aa16.83■□□□□ 0.29
LMX1B-201ENST00000355497 MAP3K9P80192 1104 aa16.83■□□□□ 0.28
LMX1B-201ENST00000355497 RPUSD2Q8IZ73 545 aaKnown RBP16.83■□□□□ 0.28
LMX1B-201ENST00000355497 TSGA10Q9BZW7 698 aa16.83■□□□□ 0.28
LMX1B-201ENST00000355497 PHF8Q9UPP1 1060 aa16.83■□□□□ 0.28
LMX1B-201ENST00000355497 NSD2O96028 1365 aa16.83■□□□□ 0.28
LMX1B-201ENST00000355497 ZEB2O60315 1214 aa16.83■□□□□ 0.28
LMX1B-201ENST00000355497 TNNC1P63316 161 aa16.83■□□□□ 0.28
LMX1B-201ENST00000355497 FAM169AQ9Y6X4 670 aa16.83■□□□□ 0.28
LMX1B-201ENST00000355497 RTL9Q8NET4 1388 aa16.83■□□□□ 0.28
LMX1B-201ENST00000355497 IGHDP01880 384 aa16.83■□□□□ 0.28
LMX1B-201ENST00000355497 ZNF569Q5MCW4 686 aa16.83■□□□□ 0.28
LMX1B-201ENST00000355497 TRIM7Q9C029 511 aa16.83■□□□□ 0.28
LMX1B-201ENST00000355497 MKRN1Q9UHC7 482 aaKnown RBP16.83■□□□□ 0.28
LMX1B-201ENST00000355497 ATP6V0A2Q9Y487 856 aa16.83■□□□□ 0.28
LMX1B-201ENST00000355497 SPTLC2O15270 562 aa16.82■□□□□ 0.28
LMX1B-201ENST00000355497 VAV2P52735 878 aa16.82■□□□□ 0.28
LMX1B-201ENST00000355497 KARSQ15046 597 aaKnown RBP16.82■□□□□ 0.28
LMX1B-201ENST00000355497 SMC1BQ8NDV3 1235 aa16.82■□□□□ 0.28
LMX1B-201ENST00000355497 CCDC110Q8TBZ0 833 aa16.82■□□□□ 0.28
LMX1B-201ENST00000355497 JAKMIP2Q96AA8 810 aa16.82■□□□□ 0.28
LMX1B-201ENST00000355497 ZKSCAN5Q9Y2L8 839 aa16.82■□□□□ 0.28
LMX1B-201ENST00000355497 TRIM75PA6NK02 468 aa16.82■□□□□ 0.28
LMX1B-201ENST00000355497 SNX16P57768 344 aa16.82■□□□□ 0.28
LMX1B-201ENST00000355497 DPH6Q7L8W6 267 aa16.82■□□□□ 0.28
LMX1B-201ENST00000355497 ESYT1Q9BSJ8 1104 aa16.82■□□□□ 0.28
LMX1B-201ENST00000355497 KRT2P35908 639 aa16.82■□□□□ 0.28
LMX1B-201ENST00000355497 IL16Q14005 1332 aa16.82■□□□□ 0.28
LMX1B-201ENST00000355497 FAM76AQ8TAV0 307 aa16.81■□□□□ 0.28
LMX1B-201ENST00000355497 CIB2O75838 187 aa16.81■□□□□ 0.28
LMX1B-201ENST00000355497 RAPGEF3O95398 923 aa16.81■□□□□ 0.28
LMX1B-201ENST00000355497 DNM1Q05193 864 aaKnown RBP16.81■□□□□ 0.28
LMX1B-201ENST00000355497 KRT79Q5XKE5 535 aa16.81■□□□□ 0.28
LMX1B-201ENST00000355497 RSRC1Q96IZ7 334 aaKnown RBP16.81■□□□□ 0.28
LMX1B-201ENST00000355497 FAM135AQ9P2D6 1515 aa16.81■□□□□ 0.28
LMX1B-201ENST00000355497 SNRPA1P09661 255 aaKnown RBP16.81■□□□□ 0.28
LMX1B-201ENST00000355497 TYRO3Q06418 890 aa16.81■□□□□ 0.28
LMX1B-201ENST00000355497 ZNF622Q969S3 477 aaKnown RBP eCLIP16.81■□□□□ 0.28
LMX1B-201ENST00000355497 RHOXF2BP0C7M4 288 aa16.81■□□□□ 0.28
LMX1B-201ENST00000355497 HDAC1Q13547 482 aaPredicted RBP16.81■□□□□ 0.28
LMX1B-201ENST00000355497 CCDC25Q86WR0 208 aa16.81■□□□□ 0.28
LMX1B-201ENST00000355497 PPFIBP2Q8ND30 876 aa16.81■□□□□ 0.28
LMX1B-201ENST00000355497 TRAF3IP1Q8TDR0 691 aaPredicted RBP16.81■□□□□ 0.28
LMX1B-201ENST00000355497 RHOXF2Q9BQY4 288 aa16.81■□□□□ 0.28
LMX1B-201ENST00000355497 LZTFL1Q9NQ48 299 aa16.81■□□□□ 0.28
LMX1B-201ENST00000355497 LACTBP83111 547 aaPredicted RBP16.81■□□□□ 0.28
LMX1B-201ENST00000355497 LMOD1P29536 600 aaPredicted RBP16.8■□□□□ 0.28
LMX1B-201ENST00000355497 TCHPQ9BT92 498 aa16.8■□□□□ 0.28
LMX1B-201ENST00000355497 MTUS1Q9ULD2 1270 aa16.8■□□□□ 0.28
LMX1B-201ENST00000355497 GMNNO75496 209 aa16.8■□□□□ 0.28
LMX1B-201ENST00000355497 TIAM1Q13009 1591 aa16.8■□□□□ 0.28
LMX1B-201ENST00000355497 TLDC2A0PJX2 215 aa16.8■□□□□ 0.28
LMX1B-201ENST00000355497 ADAMTS2O95450 1211 aa16.8■□□□□ 0.28
LMX1B-201ENST00000355497 CALCOCO2Q13137 446 aa16.8■□□□□ 0.28
LMX1B-201ENST00000355497 DNAJC21Q5F1R6 531 aaKnown RBP16.8■□□□□ 0.28
LMX1B-201ENST00000355497 JARID2Q92833 1246 aaPredicted RBP16.8■□□□□ 0.28
LMX1B-201ENST00000355497 SEL1L2Q5TEA6 688 aa16.8■□□□□ 0.28
LMX1B-201ENST00000355497 RRP36Q96EU6 259 aaKnown RBP16.8■□□□□ 0.28
LMX1B-201ENST00000355497 WASLO00401 505 aaPredicted RBP16.8■□□□□ 0.28
LMX1B-201ENST00000355497 NCBP1Q09161 790 aaKnown RBP16.8■□□□□ 0.28
LMX1B-201ENST00000355497 CALML3P27482 149 aa16.79■□□□□ 0.28
LMX1B-201ENST00000355497 RFC4P35249 363 aa16.79■□□□□ 0.28
LMX1B-201ENST00000355497 UBLCP1Q8WVY7 318 aaPredicted RBP16.79■□□□□ 0.28
LMX1B-201ENST00000355497 CCDC94Q9BW85 323 aaPredicted RBP16.79■□□□□ 0.28
LMX1B-201ENST00000355497 INTS8Q75QN2 995 aaKnown RBP16.79■□□□□ 0.28
LMX1B-201ENST00000355497 HDXQ7Z353 690 aa16.79■□□□□ 0.28
LMX1B-201ENST00000355497 STMN2Q93045 179 aa16.79■□□□□ 0.28
LMX1B-201ENST00000355497 FAM212AQ96EL1 285 aa16.79■□□□□ 0.28
LMX1B-201ENST00000355497 ZMYND15Q9H091 742 aa16.79■□□□□ 0.28
LMX1B-201ENST00000355497 TUBBP07437 444 aa16.79■□□□□ 0.28
LMX1B-201ENST00000355497 PPP1R9BQ96SB3 815 aa16.79■□□□□ 0.28
LMX1B-201ENST00000355497 SH3BP5O60239 455 aa16.79■□□□□ 0.28
LMX1B-201ENST00000355497 ATP5DP30049 168 aa16.79■□□□□ 0.28
LMX1B-201ENST00000355497 ANKRD13DQ6ZTN6 518 aa16.79■□□□□ 0.28
LMX1B-201ENST00000355497 TCEANC2Q96MN5 208 aa16.79■□□□□ 0.28
LMX1B-201ENST00000355497 NCAPD3P42695 1498 aa16.78■□□□□ 0.28
LMX1B-201ENST00000355497 ATP2B3Q16720 1220 aa16.78■□□□□ 0.28
LMX1B-201ENST00000355497 NBPF6Q5VWK0 638 aa16.78■□□□□ 0.28
LMX1B-201ENST00000355497 SYT10Q6XYQ8 523 aa16.78■□□□□ 0.28
LMX1B-201ENST00000355497 NBPF5PQ86XG9 351 aaPredicted RBP16.78■□□□□ 0.28
LMX1B-201ENST00000355497 NBPF4Q96M43 638 aa16.78■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 86.4 ms