RNA–Protein interactions for RNA: ENST00000355086.7

SRGAP1-201, Transcript of SLIT-ROBO Rho GTPase activating protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRGAP1, Length 23,331 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP1-201ENST00000355086 MICALL1Q8N3F8 863 aa6.53□□□□□ -1.36
SRGAP1-201ENST00000355086 SSH1Q8WYL5 1049 aa6.53□□□□□ -1.36
SRGAP1-201ENST00000355086 RNF34Q969K3 372 aa6.53□□□□□ -1.36
SRGAP1-201ENST00000355086 HFM1A2PYH4 1435 aa6.53□□□□□ -1.36
SRGAP1-201ENST00000355086 HSPA1LP34931 641 aa6.53□□□□□ -1.36
SRGAP1-201ENST00000355086 KMT5BQ4FZB7 885 aa6.53□□□□□ -1.36
SRGAP1-201ENST00000355086 VEZTQ9HBM0 779 aa6.53□□□□□ -1.36
SRGAP1-201ENST00000355086 SDAD1Q9NVU7 687 aaKnown RBP eCLIP6.53□□□□□ -1.36
SRGAP1-201ENST00000355086 DNAI1Q9UI46 699 aa6.53□□□□□ -1.36
SRGAP1-201ENST00000355086 FAM184BQ9ULE4 1060 aa6.53□□□□□ -1.36
SRGAP1-201ENST00000355086 PICALMQ13492 652 aa6.53□□□□□ -1.36
SRGAP1-201ENST00000355086 CCDC42Q96M95 316 aa6.53□□□□□ -1.36
SRGAP1-201ENST00000355086 LACTBP83111 547 aaPredicted RBP6.53□□□□□ -1.36
SRGAP1-201ENST00000355086 DCAF17Q5H9S7 520 aaPredicted RBP6.53□□□□□ -1.36
SRGAP1-201ENST00000355086 ZNF710Q8N1W2 664 aa6.53□□□□□ -1.36
SRGAP1-201ENST00000355086 ZBTB21Q9ULJ3 1066 aa6.53□□□□□ -1.36
SRGAP1-201ENST00000355086 RBM27Q9P2N5 1060 aaKnown RBP6.53□□□□□ -1.36
SRGAP1-201ENST00000355086 PPP1R21Q6ZMI0 780 aa6.53□□□□□ -1.36
SRGAP1-201ENST00000355086 ATP5DP30049 168 aa6.53□□□□□ -1.36
SRGAP1-201ENST00000355086 CALML3P27482 149 aa6.53□□□□□ -1.36
SRGAP1-201ENST00000355086 TSGA10Q9BZW7 698 aa6.53□□□□□ -1.36
SRGAP1-201ENST00000355086 IRX5P78411 483 aaPredicted RBP6.53□□□□□ -1.36
SRGAP1-201ENST00000355086 UVSSAQ2YD98 709 aa6.53□□□□□ -1.36
SRGAP1-201ENST00000355086 SLC4A4Q9Y6R1 1079 aa6.53□□□□□ -1.36
SRGAP1-201ENST00000355086 INF2Q27J81 1249 aa6.53□□□□□ -1.36
SRGAP1-201ENST00000355086 AFAP1L2Q8N4X5 818 aa6.53□□□□□ -1.36
SRGAP1-201ENST00000355086 ZHX1Q9UKY1 873 aaPredicted RBP6.53□□□□□ -1.36
SRGAP1-201ENST00000355086 VAV2P52735 878 aa6.52□□□□□ -1.37
SRGAP1-201ENST00000355086 DNAJC21Q5F1R6 531 aaKnown RBP6.52□□□□□ -1.37
SRGAP1-201ENST00000355086 SMARCC2Q8TAQ2 1214 aa6.52□□□□□ -1.37
SRGAP1-201ENST00000355086 DAPK3O43293 454 aa6.52□□□□□ -1.37
SRGAP1-201ENST00000355086 MARCKSP29966 332 aaPredicted RBP6.52□□□□□ -1.37
SRGAP1-201ENST00000355086 VIMP08670 466 aaKnown RBP6.52□□□□□ -1.37
SRGAP1-201ENST00000355086 GPR161Q8N6U8 529 aaKnown RBP6.52□□□□□ -1.37
SRGAP1-201ENST00000355086 BACH1O14867 736 aa6.52□□□□□ -1.37
SRGAP1-201ENST00000355086 ZEB2O60315 1214 aa6.52□□□□□ -1.37
SRGAP1-201ENST00000355086 GBP7Q8N8V2 638 aaPredicted RBP6.52□□□□□ -1.37
SRGAP1-201ENST00000355086 BICDL2A1A5D9 508 aa6.52□□□□□ -1.37
SRGAP1-201ENST00000355086 FLIIQ13045 1269 aa6.52□□□□□ -1.37
SRGAP1-201ENST00000355086 KRT79Q5XKE5 535 aa6.52□□□□□ -1.37
SRGAP1-201ENST00000355086 ITIH3Q06033 890 aa6.52□□□□□ -1.37
SRGAP1-201ENST00000355086 GSDMBQ8TAX9 411 aa6.52□□□□□ -1.37
SRGAP1-201ENST00000355086 PRIMPOLQ96LW4 560 aa6.52□□□□□ -1.37
SRGAP1-201ENST00000355086 DHX58Q96C10 678 aa6.52□□□□□ -1.37
SRGAP1-201ENST00000355086 LRRC2Q9BYS8 371 aa6.52□□□□□ -1.37
SRGAP1-201ENST00000355086 PPFIBP2Q8ND30 876 aa6.52□□□□□ -1.37
SRGAP1-201ENST00000355086 CLGNO14967 610 aa6.52□□□□□ -1.37
SRGAP1-201ENST00000355086 SYT1P21579 422 aa6.52□□□□□ -1.37
SRGAP1-201ENST00000355086 TOP2AP11388 1531 aaKnown RBP6.52□□□□□ -1.37
SRGAP1-201ENST00000355086 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP6.52□□□□□ -1.37
SRGAP1-201ENST00000355086 ANO6Q4KMQ2 910 aa6.52□□□□□ -1.37
SRGAP1-201ENST00000355086 NAA16Q6N069 864 aaPredicted RBP6.52□□□□□ -1.37
SRGAP1-201ENST00000355086 FMNL3Q8IVF7 1028 aa6.52□□□□□ -1.37
SRGAP1-201ENST00000355086 VCX3BQ9H321 246 aa6.52□□□□□ -1.37
SRGAP1-201ENST00000355086 PPANQ9NQ55 473 aaKnown RBP6.52□□□□□ -1.37
SRGAP1-201ENST00000355086 TLDC2A0PJX2 215 aa6.52□□□□□ -1.37
SRGAP1-201ENST00000355086 SEL1L2Q5TEA6 688 aa6.52□□□□□ -1.37
SRGAP1-201ENST00000355086 CSRNP2Q9H175 543 aa6.52□□□□□ -1.37
SRGAP1-201ENST00000355086 SP4Q02446 784 aa6.52□□□□□ -1.37
SRGAP1-201ENST00000355086 KRT9P35527 623 aa6.52□□□□□ -1.37
SRGAP1-201ENST00000355086 RSRC1Q96IZ7 334 aaKnown RBP6.52□□□□□ -1.37
SRGAP1-201ENST00000355086 NUF2Q9BZD4 464 aa6.52□□□□□ -1.37
SRGAP1-201ENST00000355086 CEP85LQ5SZL2 805 aa6.52□□□□□ -1.37
SRGAP1-201ENST00000355086 CEP128Q6ZU80 1094 aa6.52□□□□□ -1.37
SRGAP1-201ENST00000355086 GABPB2Q8TAK5 448 aaPredicted RBP6.52□□□□□ -1.37
SRGAP1-201ENST00000355086 NOD1Q9Y239 953 aa6.52□□□□□ -1.37
SRGAP1-201ENST00000355086 STK10O94804 968 aaKnown RBP6.52□□□□□ -1.37
SRGAP1-201ENST00000355086 EBAG9O00559 213 aa6.51□□□□□ -1.37
SRGAP1-201ENST00000355086 STX10O60499 249 aa6.51□□□□□ -1.37
SRGAP1-201ENST00000355086 ERCC3P19447 782 aa6.51□□□□□ -1.37
SRGAP1-201ENST00000355086 UBXN1Q04323 297 aa6.51□□□□□ -1.37
SRGAP1-201ENST00000355086 SDCCAG8Q86SQ7 713 aaPredicted RBP6.51□□□□□ -1.37
SRGAP1-201ENST00000355086 CCDC170Q8IYT3 715 aa6.51□□□□□ -1.37
SRGAP1-201ENST00000355086 UBLCP1Q8WVY7 318 aaPredicted RBP6.51□□□□□ -1.37
SRGAP1-201ENST00000355086 PPP2R5CQ13362 524 aa6.51□□□□□ -1.37
SRGAP1-201ENST00000355086 RRP36Q96EU6 259 aaKnown RBP6.51□□□□□ -1.37
SRGAP1-201ENST00000355086 TSHZ3Q63HK5 1081 aa6.51□□□□□ -1.37
SRGAP1-201ENST00000355086 MIPOL1Q8TD10 442 aa6.51□□□□□ -1.37
SRGAP1-201ENST00000355086 CAPN2P17655 700 aa6.51□□□□□ -1.37
SRGAP1-201ENST00000355086 FNBP1Q96RU3 617 aa6.51□□□□□ -1.37
SRGAP1-201ENST00000355086 PSMD6Q15008 389 aa6.51□□□□□ -1.37
SRGAP1-201ENST00000355086 WAPLQ7Z5K2 1190 aa6.51□□□□□ -1.37
SRGAP1-201ENST00000355086 CCDC89Q8N998 374 aa6.51□□□□□ -1.37
SRGAP1-201ENST00000355086 KRT2P35908 639 aa6.51□□□□□ -1.37
SRGAP1-201ENST00000355086 KIFAP3Q92845 792 aa6.51□□□□□ -1.37
SRGAP1-201ENST00000355086 NKIRAS1Q9NYS0 192 aa6.51□□□□□ -1.37
SRGAP1-201ENST00000355086 AFG3L2Q9Y4W6 797 aa6.51□□□□□ -1.37
SRGAP1-201ENST00000355086 HARSP12081 509 aaKnown RBP6.51□□□□□ -1.37
SRGAP1-201ENST00000355086 RARSP54136 660 aaKnown RBP6.51□□□□□ -1.37
SRGAP1-201ENST00000355086 WDR44Q5JSH3 913 aa6.51□□□□□ -1.37
SRGAP1-201ENST00000355086 RBM26Q5T8P6 1007 aaKnown RBP6.51□□□□□ -1.37
SRGAP1-201ENST00000355086 FAM204AQ9H8W3 233 aa6.51□□□□□ -1.37
SRGAP1-201ENST00000355086 SKILP12757 684 aa6.51□□□□□ -1.37
SRGAP1-201ENST00000355086 UBE3BQ7Z3V4 1068 aa6.51□□□□□ -1.37
SRGAP1-201ENST00000355086 WIZO95785 1651 aa6.51□□□□□ -1.37
SRGAP1-201ENST00000355086 ERCC5P28715 1186 aaPredicted RBP6.51□□□□□ -1.37
SRGAP1-201ENST00000355086 AOPEPQ8N6M6 819 aa6.51□□□□□ -1.37
SRGAP1-201ENST00000355086 LRPPRCP42704 1394 aaKnown RBP6.51□□□□□ -1.37
SRGAP1-201ENST00000355086 HCLS1P14317 486 aaPredicted RBP6.51□□□□□ -1.37
SRGAP1-201ENST00000355086 TBC1D9Q6ZT07 1266 aa6.51□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms