RNA–Protein interactions for RNA: ENST00000354291.8

DDX55-202, Transcript of DEAD-box helicase 55, humanhuman

TSL 5

Gene DDX55, Length 1,004 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-202ENST00000354291 WTIPA6NIX2 430 aaPredicted RBP20.64■□□□□ 0.89
DDX55-202ENST00000354291 ATP2B4P23634 1241 aa20.64■□□□□ 0.89
DDX55-202ENST00000354291 HDGFL1Q5TGJ6 251 aa20.64■□□□□ 0.89
DDX55-202ENST00000354291 CD99L2Q8TCZ2 262 aa20.64■□□□□ 0.89
DDX55-202ENST00000354291 ERO1AQ96HE7 468 aa20.64■□□□□ 0.89
DDX55-202ENST00000354291 TMEM106CQ9BVX2 250 aa20.64■□□□□ 0.89
DDX55-202ENST00000354291 CEP290O15078 2479 aa20.63■□□□□ 0.89
DDX55-202ENST00000354291 HSP90B1P14625 803 aaKnown RBP20.63■□□□□ 0.89
DDX55-202ENST00000354291 TRIM28Q13263 835 aaKnown RBP20.63■□□□□ 0.89
DDX55-202ENST00000354291 CCDC152Q4G0S7 254 aa20.63■□□□□ 0.89
DDX55-202ENST00000354291 ZBTB38Q8NAP3 1195 aaPredicted RBP20.63■□□□□ 0.89
DDX55-202ENST00000354291 JARID2Q92833 1246 aaPredicted RBP20.63■□□□□ 0.89
DDX55-202ENST00000354291 EFCC1Q9HA90 598 aa20.63■□□□□ 0.89
DDX55-202ENST00000354291 SZT2Q5T011 3432 aa20.62■□□□□ 0.89
DDX55-202ENST00000354291 TRIOBPQ9H2D6 2365 aa20.62■□□□□ 0.89
DDX55-202ENST00000354291 DACT2Q5SW24 774 aa20.62■□□□□ 0.89
DDX55-202ENST00000354291 ANKRD18AQ8IVF6 992 aa20.62■□□□□ 0.89
DDX55-202ENST00000354291 DBF4Q9UBU7 674 aaPredicted RBP20.62■□□□□ 0.89
DDX55-202ENST00000354291 IGF2BP3O00425 579 aaKnown RBP eCLIP20.61■□□□□ 0.89
DDX55-202ENST00000354291 RIC3Q7Z5B4 369 aa20.61■□□□□ 0.89
DDX55-202ENST00000354291 APOBEC3FQ8IUX4 373 aaKnown RBP20.61■□□□□ 0.89
DDX55-202ENST00000354291 ARMC5Q96C12 935 aa20.61■□□□□ 0.89
DDX55-202ENST00000354291 A0A0C4DFX4 3053 aa20.59■□□□□ 0.89
DDX55-202ENST00000354291 TMPOP42166 694 aaKnown RBP20.59■□□□□ 0.89
DDX55-202ENST00000354291 LMOD3Q0VAK6 560 aa20.59■□□□□ 0.89
DDX55-202ENST00000354291 NEUROD2Q15784 382 aa20.59■□□□□ 0.89
DDX55-202ENST00000354291 CLMNQ96JQ2 1002 aa20.59■□□□□ 0.89
DDX55-202ENST00000354291 HYPKQ9NX55 129 aa20.59■□□□□ 0.89
DDX55-202ENST00000354291 CHL1O00533 1208 aa20.58■□□□□ 0.89
DDX55-202ENST00000354291 PDE8AO60658 829 aa20.58■□□□□ 0.89
DDX55-202ENST00000354291 CRHR2Q13324 411 aa20.58■□□□□ 0.89
DDX55-202ENST00000354291 STRIP1Q5VSL9 837 aa20.58■□□□□ 0.89
DDX55-202ENST00000354291 OTUD7BQ6GQQ9 843 aa20.58■□□□□ 0.89
DDX55-202ENST00000354291 WNK4Q96J92 1243 aa20.58■□□□□ 0.89
DDX55-202ENST00000354291 MYO3BQ8WXR4 1341 aa20.57■□□□□ 0.88
DDX55-202ENST00000354291 H0YGN5 161 aa20.57■□□□□ 0.88
DDX55-202ENST00000354291 ZBTB48P10074 688 aaPredicted RBP20.57■□□□□ 0.88
DDX55-202ENST00000354291 SP3Q02447 781 aa20.57■□□□□ 0.88
DDX55-202ENST00000354291 SLC4A8Q2Y0W8 1093 aa20.57■□□□□ 0.88
DDX55-202ENST00000354291 KIAA0825Q8IV33 1275 aa20.57■□□□□ 0.88
DDX55-202ENST00000354291 MYD88Q99836 296 aa20.57■□□□□ 0.88
DDX55-202ENST00000354291 DEFB129Q9H1M3 183 aa20.57■□□□□ 0.88
DDX55-202ENST00000354291 PPP1R12BO60237 982 aaPredicted RBP20.56■□□□□ 0.88
DDX55-202ENST00000354291 MYCP01106 439 aaPredicted RBP20.56■□□□□ 0.88
DDX55-202ENST00000354291 TTLL5Q6EMB2 1281 aa20.56■□□□□ 0.88
DDX55-202ENST00000354291 DLL1O00548 723 aa20.55■□□□□ 0.88
DDX55-202ENST00000354291 PCCAP05165 728 aaPredicted RBP20.55■□□□□ 0.88
DDX55-202ENST00000354291 GOLGA2Q08379 1002 aa20.55■□□□□ 0.88
DDX55-202ENST00000354291 NBPF11Q86T75 865 aa20.55■□□□□ 0.88
DDX55-202ENST00000354291 COA1Q9GZY4 146 aa20.55■□□□□ 0.88
DDX55-202ENST00000354291 MINPP1Q9UNW1 487 aa20.55■□□□□ 0.88
DDX55-202ENST00000354291 MMP14P50281 582 aa20.54■□□□□ 0.88
DDX55-202ENST00000354291 CAP1Q01518 475 aa20.54■□□□□ 0.88
DDX55-202ENST00000354291 ZNF333Q96JL9 665 aa20.54■□□□□ 0.88
DDX55-202ENST00000354291 CDC5LQ99459 802 aaKnown RBP20.54■□□□□ 0.88
DDX55-202ENST00000354291 MED23Q9ULK4 1368 aa20.54■□□□□ 0.88
DDX55-202ENST00000354291 CCT4P50991 539 aaKnown RBP20.53■□□□□ 0.88
DDX55-202ENST00000354291 MAP3K11Q16584 847 aa20.53■□□□□ 0.88
DDX55-202ENST00000354291 SLC9C1Q4G0N8 1177 aa20.53■□□□□ 0.88
DDX55-202ENST00000354291 TXNRD3Q86VQ6 643 aa20.53■□□□□ 0.88
DDX55-202ENST00000354291 CCDC191Q8NCU4 936 aa20.53■□□□□ 0.88
DDX55-202ENST00000354291 OTUD5Q96G74 571 aa20.53■□□□□ 0.88
DDX55-202ENST00000354291 PSME4Q14997 1843 aa20.53■□□□□ 0.88
DDX55-202ENST00000354291 HOXB7P09629 217 aa20.52■□□□□ 0.88
DDX55-202ENST00000354291 GTF2IP78347 998 aa20.52■□□□□ 0.88
DDX55-202ENST00000354291 DLGAP5Q15398 846 aa20.52■□□□□ 0.88
DDX55-202ENST00000354291 DUSP27Q5VZP5 1158 aa20.52■□□□□ 0.88
DDX55-202ENST00000354291 CHRDL2Q6WN34 429 aa20.52■□□□□ 0.88
DDX55-202ENST00000354291 SLC17A8Q8NDX2 589 aa20.52■□□□□ 0.88
DDX55-202ENST00000354291 PTPN18Q99952 460 aa20.52■□□□□ 0.88
DDX55-202ENST00000354291 PHAXQ9H814 394 aaKnown RBP20.52■□□□□ 0.88
DDX55-202ENST00000354291 CWC25Q9NXE8 425 aaPredicted RBP20.52■□□□□ 0.88
DDX55-202ENST00000354291 GJA5P36382 358 aa20.51■□□□□ 0.87
DDX55-202ENST00000354291 ZBED3Q96IU2 234 aaPredicted RBP20.51■□□□□ 0.87
DDX55-202ENST00000354291 BSDC1Q9NW68 430 aaPredicted RBP20.51■□□□□ 0.87
DDX55-202ENST00000354291 PTCH2Q9Y6C5 1203 aa20.51■□□□□ 0.87
DDX55-202ENST00000354291 ARHGEF6Q15052 776 aa20.5■□□□□ 0.87
DDX55-202ENST00000354291 SUPT20HL1Q3ZLR7 823 aa20.5■□□□□ 0.87
DDX55-202ENST00000354291 RANBP2P49792 3224 aaKnown RBP20.5■□□□□ 0.87
DDX55-202ENST00000354291 IREB2P48200 963 aaKnown RBP20.49■□□□□ 0.87
DDX55-202ENST00000354291 CCDC146Q8IYE0 955 aa20.49■□□□□ 0.87
DDX55-202ENST00000354291 CLRN2A0PK11 232 aa20.48■□□□□ 0.87
DDX55-202ENST00000354291 CTSWP56202 376 aa20.48■□□□□ 0.87
DDX55-202ENST00000354291 NBPF12Q5TAG4 269 aaPredicted RBP20.48■□□□□ 0.87
DDX55-202ENST00000354291 DPF3Q92784 378 aa20.48■□□□□ 0.87
DDX55-202ENST00000354291 GREM2Q9H772 168 aa20.48■□□□□ 0.87
DDX55-202ENST00000354291 LEMD3Q9Y2U8 911 aa20.48■□□□□ 0.87
DDX55-202ENST00000354291 PCDHAC2Q9Y5I4 1007 aa20.48■□□□□ 0.87
DDX55-202ENST00000354291 UNCXA6NJT0 531 aa20.47■□□□□ 0.87
DDX55-202ENST00000354291 USP2O75604 605 aaPredicted RBP20.47■□□□□ 0.87
DDX55-202ENST00000354291 KLRK1P26718 216 aa20.47■□□□□ 0.87
DDX55-202ENST00000354291 TTLL11Q8NHH1 800 aa20.47■□□□□ 0.87
DDX55-202ENST00000354291 VEZTQ9HBM0 779 aa20.47■□□□□ 0.87
DDX55-202ENST00000354291 RBM27Q9P2N5 1060 aaKnown RBP20.47■□□□□ 0.87
DDX55-202ENST00000354291 PPP2R3BQ9Y5P8 575 aa20.47■□□□□ 0.87
DDX55-202ENST00000354291 RBBP6Q7Z6E9 1792 aaKnown RBP20.46■□□□□ 0.87
DDX55-202ENST00000354291 TESPA1A2RU30 521 aaPredicted RBP20.46■□□□□ 0.87
DDX55-202ENST00000354291 F8W031 263 aaPredicted RBP20.46■□□□□ 0.87
DDX55-202ENST00000354291 ANKRD13AQ8IZ07 590 aa20.46■□□□□ 0.87
DDX55-202ENST00000354291 SH3TC2Q8TF17 1288 aa20.46■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms