RNA–Protein interactions for RNA: ENST00000353414.8

COL11A1-201, Transcript of collagen type XI alpha 1 chain, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene COL11A1, Length 7,173 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A1-201ENST00000353414 Q6ZUG5 572 aa11.35□□□□□ -0.59
COL11A1-201ENST00000353414 ZCRB1Q8TBF4 217 aaKnown RBP11.35□□□□□ -0.59
COL11A1-201ENST00000353414 CCDC169A6NNP5 214 aa11.34□□□□□ -0.59
COL11A1-201ENST00000353414 SYKP43405 635 aa11.34□□□□□ -0.59
COL11A1-201ENST00000353414 UBASH3AP57075 661 aa11.34□□□□□ -0.59
COL11A1-201ENST00000353414 FAM114A1Q8IWE2 563 aa11.34□□□□□ -0.59
COL11A1-201ENST00000353414 KCNK9Q9NPC2 374 aa11.34□□□□□ -0.59
COL11A1-201ENST00000353414 NOL12Q9UGY1 213 aaKnown RBP eCLIP11.34□□□□□ -0.59
COL11A1-201ENST00000353414 AGTPBP1Q9UPW5 1226 aa11.34□□□□□ -0.59
COL11A1-201ENST00000353414 V9GYY5 206 aaPredicted RBP11.34□□□□□ -0.59
COL11A1-201ENST00000353414 SNW1Q13573 536 aaKnown RBP11.34□□□□□ -0.59
COL11A1-201ENST00000353414 USH1GQ495M9 461 aa11.34□□□□□ -0.59
COL11A1-201ENST00000353414 ERMNQ8TAM6 284 aa11.34□□□□□ -0.59
COL11A1-201ENST00000353414 PLEKHH2Q8IVE3 1493 aa11.34□□□□□ -0.59
COL11A1-201ENST00000353414 ZBTB43O43298 467 aa11.34□□□□□ -0.59
COL11A1-201ENST00000353414 STX1AQ16623 288 aa11.34□□□□□ -0.59
COL11A1-201ENST00000353414 SREK1Q8WXA9 508 aaKnown RBP11.34□□□□□ -0.59
COL11A1-201ENST00000353414 IFT81Q8WYA0 676 aa11.34□□□□□ -0.59
COL11A1-201ENST00000353414 ATAD2Q6PL18 1390 aa11.34□□□□□ -0.59
COL11A1-201ENST00000353414 POLA1P09884 1462 aaPredicted RBP11.34□□□□□ -0.59
COL11A1-201ENST00000353414 PTPDC1A2A3K4 754 aa11.34□□□□□ -0.59
COL11A1-201ENST00000353414 DZIP3Q86Y13 1208 aaKnown RBP11.34□□□□□ -0.59
COL11A1-201ENST00000353414 CEP112Q8N8E3 955 aa11.34□□□□□ -0.59
COL11A1-201ENST00000353414 RNF169Q8NCN4 708 aa11.34□□□□□ -0.59
COL11A1-201ENST00000353414 BACH2Q9BYV9 841 aa11.34□□□□□ -0.59
COL11A1-201ENST00000353414 TRIM6Q9C030 488 aaPredicted RBP11.34□□□□□ -0.59
COL11A1-201ENST00000353414 SLC9C2Q5TAH2 1124 aa11.34□□□□□ -0.59
COL11A1-201ENST00000353414 COPS6Q7L5N1 327 aa11.34□□□□□ -0.59
COL11A1-201ENST00000353414 GBP3Q9H0R5 595 aa11.34□□□□□ -0.59
COL11A1-201ENST00000353414 GPHNQ9NQX3 736 aaPredicted RBP11.34□□□□□ -0.59
COL11A1-201ENST00000353414 TXNDC16Q9P2K2 825 aa11.34□□□□□ -0.59
COL11A1-201ENST00000353414 CNPY2Q9Y2B0 182 aa11.34□□□□□ -0.59
COL11A1-201ENST00000353414 CCDC155Q8N6L0 562 aa11.33□□□□□ -0.6
COL11A1-201ENST00000353414 C6orf50Q9HD87 102 aa11.33□□□□□ -0.6
COL11A1-201ENST00000353414 DISP3Q9P2K9 1392 aa11.33□□□□□ -0.6
COL11A1-201ENST00000353414 KIF4AO95239 1232 aa11.33□□□□□ -0.6
COL11A1-201ENST00000353414 CNGA1P29973 690 aa11.33□□□□□ -0.6
COL11A1-201ENST00000353414 KARSQ15046 597 aaKnown RBP11.33□□□□□ -0.6
COL11A1-201ENST00000353414 PICK1Q9NRD5 415 aa11.33□□□□□ -0.6
COL11A1-201ENST00000353414 RTCBQ9Y3I0 505 aaKnown RBP11.33□□□□□ -0.6
COL11A1-201ENST00000353414 CEP83Q9Y592 693 aa11.33□□□□□ -0.6
COL11A1-201ENST00000353414 FAM169AQ9Y6X4 670 aa11.33□□□□□ -0.6
COL11A1-201ENST00000353414 KCNA4P22459 653 aa11.33□□□□□ -0.6
COL11A1-201ENST00000353414 KMT5BQ4FZB7 885 aa11.33□□□□□ -0.6
COL11A1-201ENST00000353414 ANKRD13DQ6ZTN6 518 aa11.33□□□□□ -0.6
COL11A1-201ENST00000353414 KIFC2Q96AC6 838 aa11.33□□□□□ -0.6
COL11A1-201ENST00000353414 PPP1R9BQ96SB3 815 aa11.33□□□□□ -0.6
COL11A1-201ENST00000353414 GNPATO15228 680 aa11.33□□□□□ -0.6
COL11A1-201ENST00000353414 NAA25Q14CX7 972 aa11.33□□□□□ -0.6
COL11A1-201ENST00000353414 DDB1Q16531 1140 aa11.33□□□□□ -0.6
COL11A1-201ENST00000353414 DAPK3O43293 454 aa11.33□□□□□ -0.6
COL11A1-201ENST00000353414 SATB1Q01826 763 aa11.33□□□□□ -0.6
COL11A1-201ENST00000353414 BRF1Q92994 677 aa11.32□□□□□ -0.6
COL11A1-201ENST00000353414 MCM5P33992 734 aa11.32□□□□□ -0.6
COL11A1-201ENST00000353414 C6orf163Q5TEZ5 329 aa11.32□□□□□ -0.6
COL11A1-201ENST00000353414 EPSTI1Q96J88 318 aa11.32□□□□□ -0.6
COL11A1-201ENST00000353414 RAD51AP2Q09MP3 1159 aa11.32□□□□□ -0.6
COL11A1-201ENST00000353414 PPP4R3BQ5MIZ7 849 aa11.32□□□□□ -0.6
COL11A1-201ENST00000353414 C4orf50Q6ZRC1 276 aa11.32□□□□□ -0.6
COL11A1-201ENST00000353414 TLDC2A0PJX2 215 aa11.32□□□□□ -0.6
COL11A1-201ENST00000353414 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP11.32□□□□□ -0.6
COL11A1-201ENST00000353414 RRP36Q96EU6 259 aaKnown RBP11.32□□□□□ -0.6
COL11A1-201ENST00000353414 TBC1D7Q9P0N9 293 aa11.32□□□□□ -0.6
COL11A1-201ENST00000353414 SLU7O95391 586 aaKnown RBP11.32□□□□□ -0.6
COL11A1-201ENST00000353414 BIRC3Q13489 604 aa11.32□□□□□ -0.6
COL11A1-201ENST00000353414 PSMD6Q15008 389 aa11.32□□□□□ -0.6
COL11A1-201ENST00000353414 MCM6Q14566 821 aa11.32□□□□□ -0.6
COL11A1-201ENST00000353414 GPR162Q16538 588 aa11.32□□□□□ -0.6
COL11A1-201ENST00000353414 FAM47CQ5HY64 1035 aa11.32□□□□□ -0.6
COL11A1-201ENST00000353414 CCT6BQ92526 530 aa11.32□□□□□ -0.6
COL11A1-201ENST00000353414 SCAND2PQ9GZW5 306 aaPredicted RBP11.32□□□□□ -0.6
COL11A1-201ENST00000353414 ADGRL1O94910 1474 aa11.31□□□□□ -0.6
COL11A1-201ENST00000353414 CCDC102BQ68D86 513 aa11.31□□□□□ -0.6
COL11A1-201ENST00000353414 TTC30BQ8N4P2 665 aa11.31□□□□□ -0.6
COL11A1-201ENST00000353414 CFAP57Q96MR6 1250 aa11.31□□□□□ -0.6
COL11A1-201ENST00000353414 SNRPA1P09661 255 aaKnown RBP11.31□□□□□ -0.6
COL11A1-201ENST00000353414 SLFN5Q08AF3 891 aa11.31□□□□□ -0.6
COL11A1-201ENST00000353414 ANO6Q4KMQ2 910 aa11.31□□□□□ -0.6
COL11A1-201ENST00000353414 PPP1R7Q15435 360 aa11.31□□□□□ -0.6
COL11A1-201ENST00000353414 TBC1D9Q6ZT07 1266 aa11.31□□□□□ -0.6
COL11A1-201ENST00000353414 CPXCR1Q8N123 301 aa11.31□□□□□ -0.6
COL11A1-201ENST00000353414 MAPK8IP1Q9UQF2 711 aa11.31□□□□□ -0.6
COL11A1-201ENST00000353414 DAAM2Q86T65 1068 aa11.31□□□□□ -0.6
COL11A1-201ENST00000353414 NFATC2IPQ8NCF5 419 aa11.31□□□□□ -0.6
COL11A1-201ENST00000353414 E7EVH7 732 aa11.31□□□□□ -0.6
COL11A1-201ENST00000353414 CFAP157Q5JU67 520 aa11.31□□□□□ -0.6
COL11A1-201ENST00000353414 HECW1Q76N89 1606 aa11.31□□□□□ -0.6
COL11A1-201ENST00000353414 UBXN1Q04323 297 aa11.31□□□□□ -0.6
COL11A1-201ENST00000353414 PPP4R4Q6NUP7 873 aa11.31□□□□□ -0.6
COL11A1-201ENST00000353414 PLEKHA4Q9H4M7 779 aa11.31□□□□□ -0.6
COL11A1-201ENST00000353414 ESPNB1AK53 854 aa11.3□□□□□ -0.6
COL11A1-201ENST00000353414 TNPO1Q92973 898 aaKnown RBP11.3□□□□□ -0.6
COL11A1-201ENST00000353414 NOP56O00567 594 aaKnown RBP11.3□□□□□ -0.6
COL11A1-201ENST00000353414 GTF2A1P52655 376 aaPredicted RBP11.3□□□□□ -0.6
COL11A1-201ENST00000353414 CKAP4Q07065 602 aaKnown RBP11.3□□□□□ -0.6
COL11A1-201ENST00000353414 SEPT14Q6ZU15 432 aa11.3□□□□□ -0.6
COL11A1-201ENST00000353414 AOPEPQ8N6M6 819 aa11.3□□□□□ -0.6
COL11A1-201ENST00000353414 NAP1L3Q99457 506 aaPredicted RBP11.3□□□□□ -0.6
COL11A1-201ENST00000353414 SH2B1Q9NRF2 756 aaPredicted RBP11.3□□□□□ -0.6
COL11A1-201ENST00000353414 TMOD4Q9NZQ9 345 aa11.3□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms