RNA–Protein interactions for RNA: ENST00000351691.9

TRAF3-202, Transcript of TNF receptor associated factor 3, humanhuman

TSL 1 (best) BASIC

Gene TRAF3, Length 2,239 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3-202ENST00000351691 MAP3K2Q9Y2U5 619 aa17.4■□□□□ 0.38
TRAF3-202ENST00000351691 ABCC6O95255 1503 aa17.4■□□□□ 0.38
TRAF3-202ENST00000351691 TADA3O75528 432 aa17.39■□□□□ 0.37
TRAF3-202ENST00000351691 ATF3P18847 181 aa17.39■□□□□ 0.37
TRAF3-202ENST00000351691 OS9Q13438 667 aaPredicted RBP17.39■□□□□ 0.37
TRAF3-202ENST00000351691 LINS1Q8NG48 757 aa17.39■□□□□ 0.37
TRAF3-202ENST00000351691 DDX17Q92841 729 aaKnown RBP17.39■□□□□ 0.37
TRAF3-202ENST00000351691 ECHDC1Q9NTX5 307 aa17.39■□□□□ 0.37
TRAF3-202ENST00000351691 HMG20BQ9P0W2 317 aa17.39■□□□□ 0.37
TRAF3-202ENST00000351691 KRBA2Q6ZNG9 492 aa17.39■□□□□ 0.37
TRAF3-202ENST00000351691 GOLGA5Q8TBA6 731 aa17.39■□□□□ 0.37
TRAF3-202ENST00000351691 DDX21Q9NR30 783 aaKnown RBP eCLIP17.39■□□□□ 0.37
TRAF3-202ENST00000351691 JCADQ9P266 1359 aa17.38■□□□□ 0.37
TRAF3-202ENST00000351691 TOB2Q14106 344 aaPredicted RBP17.38■□□□□ 0.37
TRAF3-202ENST00000351691 DNAI1Q9UI46 699 aa17.38■□□□□ 0.37
TRAF3-202ENST00000351691 NPHP1O15259 732 aa17.37■□□□□ 0.37
TRAF3-202ENST00000351691 LRRFIP1Q32MZ4 808 aaKnown RBP17.37■□□□□ 0.37
TRAF3-202ENST00000351691 CCDC73Q6ZRK6 1079 aa17.37■□□□□ 0.37
TRAF3-202ENST00000351691 KRT28Q7Z3Y7 464 aa17.37■□□□□ 0.37
TRAF3-202ENST00000351691 CCAR1Q8IX12 1150 aaKnown RBP17.37■□□□□ 0.37
TRAF3-202ENST00000351691 LRRN4CLQ8ND94 238 aa17.37■□□□□ 0.37
TRAF3-202ENST00000351691 ENGASEQ8NFI3 743 aa17.37■□□□□ 0.37
TRAF3-202ENST00000351691 NEK11Q8NG66 645 aa17.37■□□□□ 0.37
TRAF3-202ENST00000351691 EXOC4Q96A65 974 aa17.37■□□□□ 0.37
TRAF3-202ENST00000351691 AK7Q96M32 723 aa17.37■□□□□ 0.37
TRAF3-202ENST00000351691 DCCP43146 1447 aa17.37■□□□□ 0.37
TRAF3-202ENST00000351691 SFPQP23246 707 aaKnown RBP eCLIP17.37■□□□□ 0.37
TRAF3-202ENST00000351691 ZSCAN26Q16670 478 aa17.37■□□□□ 0.37
TRAF3-202ENST00000351691 NFATC2IPQ8NCF5 419 aa17.37■□□□□ 0.37
TRAF3-202ENST00000351691 MNS1Q8NEH6 495 aa17.37■□□□□ 0.37
TRAF3-202ENST00000351691 KINO60870 393 aaKnown RBP17.36■□□□□ 0.37
TRAF3-202ENST00000351691 TNNT3P45378 269 aaPredicted RBP17.36■□□□□ 0.37
TRAF3-202ENST00000351691 NOP2P46087 812 aaKnown RBP17.36■□□□□ 0.37
TRAF3-202ENST00000351691 FAM160A1Q05DH4 1040 aa17.36■□□□□ 0.37
TRAF3-202ENST00000351691 ARMCX5Q6P1M9 558 aa17.36■□□□□ 0.37
TRAF3-202ENST00000351691 FCHSD1Q86WN1 690 aa17.36■□□□□ 0.37
TRAF3-202ENST00000351691 FBXO18Q8NFZ0 1043 aa17.36■□□□□ 0.37
TRAF3-202ENST00000351691 SMARCE1Q969G3 411 aa17.36■□□□□ 0.37
TRAF3-202ENST00000351691 ANXA1P04083 346 aa17.36■□□□□ 0.37
TRAF3-202ENST00000351691 ADD1P35611 737 aaKnown RBP17.36■□□□□ 0.37
TRAF3-202ENST00000351691 AOPEPQ8N6M6 819 aa17.36■□□□□ 0.37
TRAF3-202ENST00000351691 ALS2Q96Q42 1657 aa17.35■□□□□ 0.37
TRAF3-202ENST00000351691 POLR3GO15318 223 aaPredicted RBP17.35■□□□□ 0.37
TRAF3-202ENST00000351691 TBC1D8O95759 1140 aa17.35■□□□□ 0.37
TRAF3-202ENST00000351691 IFIT2P09913 472 aaKnown RBP17.35■□□□□ 0.37
TRAF3-202ENST00000351691 OAS2P29728 719 aaKnown RBP17.35■□□□□ 0.37
TRAF3-202ENST00000351691 CASQ1P31415 396 aa17.35■□□□□ 0.37
TRAF3-202ENST00000351691 NAA16Q6N069 864 aaPredicted RBP17.35■□□□□ 0.37
TRAF3-202ENST00000351691 GPR161Q8N6U8 529 aaKnown RBP17.35■□□□□ 0.37
TRAF3-202ENST00000351691 TRERF1Q96PN7 1200 aa17.35■□□□□ 0.37
TRAF3-202ENST00000351691 LLPHQ9BRT6 129 aaKnown RBP17.35■□□□□ 0.37
TRAF3-202ENST00000351691 RSPH14Q9UHP6 348 aa17.35■□□□□ 0.37
TRAF3-202ENST00000351691 MYO1CO00159 1063 aa17.35■□□□□ 0.37
TRAF3-202ENST00000351691 GRM8O00222 908 aa17.35■□□□□ 0.37
TRAF3-202ENST00000351691 DTNBO60941 627 aa17.35■□□□□ 0.37
TRAF3-202ENST00000351691 KRT32Q14532 448 aa17.35■□□□□ 0.37
TRAF3-202ENST00000351691 CC2D1AQ6P1N0 951 aaPredicted RBP17.35■□□□□ 0.37
TRAF3-202ENST00000351691 LMOD2Q6P5Q4 547 aa17.35■□□□□ 0.37
TRAF3-202ENST00000351691 BRF1Q92994 677 aa17.35■□□□□ 0.37
TRAF3-202ENST00000351691 ATG3Q9NT62 314 aa17.35■□□□□ 0.37
TRAF3-202ENST00000351691 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP17.35■□□□□ 0.37
TRAF3-202ENST00000351691 SCN11AQ9UI33 1791 aa17.35■□□□□ 0.37
TRAF3-202ENST00000351691 SMC1AQ14683 1233 aaKnown RBP17.34■□□□□ 0.37
TRAF3-202ENST00000351691 H3BQV1 296 aa17.33■□□□□ 0.37
TRAF3-202ENST00000351691 ST5P78524 1137 aa17.33■□□□□ 0.37
TRAF3-202ENST00000351691 PROSER3Q2NL68 480 aa17.33■□□□□ 0.37
TRAF3-202ENST00000351691 IFFO2Q5TF58 517 aa17.33■□□□□ 0.37
TRAF3-202ENST00000351691 JAKMIP3Q5VZ66 844 aa17.33■□□□□ 0.37
TRAF3-202ENST00000351691 TRIM65Q6PJ69 517 aa17.33■□□□□ 0.37
TRAF3-202ENST00000351691 CCDC191Q8NCU4 936 aa17.33■□□□□ 0.37
TRAF3-202ENST00000351691 ZNF396Q96N95 335 aaPredicted RBP17.33■□□□□ 0.37
TRAF3-202ENST00000351691 GOLPH3LQ9H4A5 285 aa17.33■□□□□ 0.37
TRAF3-202ENST00000351691 HOMER1Q86YM7 354 aa17.33■□□□□ 0.36
TRAF3-202ENST00000351691 SMARCC2Q8TAQ2 1214 aa17.33■□□□□ 0.36
TRAF3-202ENST00000351691 GEMIN8Q9NWZ8 242 aaKnown RBP17.33■□□□□ 0.36
TRAF3-202ENST00000351691 MED23Q9ULK4 1368 aa17.33■□□□□ 0.36
TRAF3-202ENST00000351691 RGPD5Q99666 1765 aa17.32■□□□□ 0.36
TRAF3-202ENST00000351691 G3BP1Q13283 466 aaKnown RBP eCLIP17.32■□□□□ 0.36
TRAF3-202ENST00000351691 TMC6Q7Z403 805 aa17.32■□□□□ 0.36
TRAF3-202ENST00000351691 SRLQ86TD4 932 aa17.32■□□□□ 0.36
TRAF3-202ENST00000351691 MSL3Q8N5Y2 521 aaKnown RBP17.32■□□□□ 0.36
TRAF3-202ENST00000351691 MPHOSPH8Q99549 860 aa17.32■□□□□ 0.36
TRAF3-202ENST00000351691 CADPS2Q86UW7 1296 aa17.32■□□□□ 0.36
TRAF3-202ENST00000351691 REXO1L1PQ8IX06 675 aa17.32■□□□□ 0.36
TRAF3-202ENST00000351691 XPO4Q9C0E2 1151 aaKnown RBP17.32■□□□□ 0.36
TRAF3-202ENST00000351691 AXIN2Q9Y2T1 843 aa17.32■□□□□ 0.36
TRAF3-202ENST00000351691 DHX16O60231 1041 aaKnown RBP17.31■□□□□ 0.36
TRAF3-202ENST00000351691 SASH3O75995 380 aa17.31■□□□□ 0.36
TRAF3-202ENST00000351691 IVLP07476 585 aa17.31■□□□□ 0.36
TRAF3-202ENST00000351691 NMIQ13287 307 aaPredicted RBP17.31■□□□□ 0.36
TRAF3-202ENST00000351691 GOLGA6L1Q8N7Z2 621 aa17.31■□□□□ 0.36
TRAF3-202ENST00000351691 RAPGEF4Q8WZA2 1011 aa17.31■□□□□ 0.36
TRAF3-202ENST00000351691 SUCLG2Q96I99 432 aa17.31■□□□□ 0.36
TRAF3-202ENST00000351691 TMX1Q9H3N1 280 aa17.31■□□□□ 0.36
TRAF3-202ENST00000351691 RPS6KA5O75582 802 aa17.31■□□□□ 0.36
TRAF3-202ENST00000351691 PDIA6Q15084 440 aa17.31■□□□□ 0.36
TRAF3-202ENST00000351691 USPL1Q5W0Q7 1092 aa17.31■□□□□ 0.36
TRAF3-202ENST00000351691 SLC52A2Q9HAB3 445 aa17.31■□□□□ 0.36
TRAF3-202ENST00000351691 BRMS1Q9HCU9 246 aa17.31■□□□□ 0.36
TRAF3-202ENST00000351691 ARFGAP3Q9NP61 516 aa17.31■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms