RNA–Protein interactions for RNA: ENST00000351288.10

SMPD4-201, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 2 BASIC

Gene SMPD4, Length 3,661 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-201ENST00000351288 U3KPZ7 1027 aaPredicted RBP12.24□□□□□ -0.45
SMPD4-201ENST00000351288 ZNF213O14771 459 aa12.24□□□□□ -0.45
SMPD4-201ENST00000351288 RFX5P48382 616 aaPredicted RBP12.24□□□□□ -0.45
SMPD4-201ENST00000351288 DACT1Q9NYF0 836 aa12.24□□□□□ -0.45
SMPD4-201ENST00000351288 USP42Q9H9J4 1324 aaKnown RBP12.24□□□□□ -0.45
SMPD4-201ENST00000351288 SYNE3Q6ZMZ3 975 aa12.23□□□□□ -0.45
SMPD4-201ENST00000351288 STOX1Q6ZVD7 989 aa12.23□□□□□ -0.45
SMPD4-201ENST00000351288 LUZP1Q86V48 1076 aa12.23□□□□□ -0.45
SMPD4-201ENST00000351288 SPATA32Q96LK8 384 aa12.23□□□□□ -0.45
SMPD4-201ENST00000351288 ZKSCAN3Q9BRR0 538 aa12.23□□□□□ -0.45
SMPD4-201ENST00000351288 ME1P48163 572 aa12.23□□□□□ -0.45
SMPD4-201ENST00000351288 KRT85P78386 507 aa12.23□□□□□ -0.45
SMPD4-201ENST00000351288 LRP10Q7Z4F1 713 aa12.23□□□□□ -0.45
SMPD4-201ENST00000351288 GJB4Q9NTQ9 266 aa12.23□□□□□ -0.45
SMPD4-201ENST00000351288 KDM3BQ7LBC6 1761 aa12.23□□□□□ -0.45
SMPD4-201ENST00000351288 GNPATO15228 680 aa12.23□□□□□ -0.45
SMPD4-201ENST00000351288 NAPBQ9H115 298 aa12.23□□□□□ -0.45
SMPD4-201ENST00000351288 COPRSQ9NQ92 184 aa12.23□□□□□ -0.45
SMPD4-201ENST00000351288 KIF3AQ9Y496 699 aa12.23□□□□□ -0.45
SMPD4-201ENST00000351288 NBPF5PQ86XG9 351 aaPredicted RBP12.22□□□□□ -0.45
SMPD4-201ENST00000351288 ZSCAN31Q96LW9 406 aaPredicted RBP12.22□□□□□ -0.45
SMPD4-201ENST00000351288 MST1RQ04912 1400 aa12.22□□□□□ -0.45
SMPD4-201ENST00000351288 GOLGA8BA8MQT2 603 aa12.22□□□□□ -0.45
SMPD4-201ENST00000351288 PDCP20941 246 aa12.22□□□□□ -0.45
SMPD4-201ENST00000351288 ANKRD1Q15327 319 aa12.22□□□□□ -0.45
SMPD4-201ENST00000351288 CSPP1Q1MSJ5 1256 aa12.22□□□□□ -0.45
SMPD4-201ENST00000351288 SAMD1Q6SPF0 538 aaPredicted RBP12.22□□□□□ -0.45
SMPD4-201ENST00000351288 SH2B1Q9NRF2 756 aaPredicted RBP12.22□□□□□ -0.45
SMPD4-201ENST00000351288 ZNF609O15014 1411 aa12.22□□□□□ -0.45
SMPD4-201ENST00000351288 LOC102724428A0A0B4J2F2 783 aa12.22□□□□□ -0.45
SMPD4-201ENST00000351288 SIK1P57059 783 aa12.22□□□□□ -0.45
SMPD4-201ENST00000351288 KRT32Q14532 448 aa12.22□□□□□ -0.45
SMPD4-201ENST00000351288 KBTBD3Q8NAB2 608 aa12.22□□□□□ -0.45
SMPD4-201ENST00000351288 UTP14AQ9BVJ6 771 aaKnown RBP12.22□□□□□ -0.45
SMPD4-201ENST00000351288 ANKIB1Q9P2G1 1089 aa12.22□□□□□ -0.45
SMPD4-201ENST00000351288 CCDC39Q9UFE4 941 aa12.22□□□□□ -0.45
SMPD4-201ENST00000351288 OFD1O75665 1012 aa12.21□□□□□ -0.45
SMPD4-201ENST00000351288 CPLX2Q6PUV4 134 aaKnown RBP12.21□□□□□ -0.45
SMPD4-201ENST00000351288 SDF4Q9BRK5 362 aa12.21□□□□□ -0.45
SMPD4-201ENST00000351288 MED1Q15648 1581 aaPredicted RBP12.21□□□□□ -0.45
SMPD4-201ENST00000351288 UQCRHLA0A096LP55 91 aa12.21□□□□□ -0.46
SMPD4-201ENST00000351288 UQCRHP07919 91 aa12.21□□□□□ -0.46
SMPD4-201ENST00000351288 CRKLP46109 303 aaKnown RBP12.21□□□□□ -0.46
SMPD4-201ENST00000351288 MAGEB6Q8N7X4 407 aa12.21□□□□□ -0.46
SMPD4-201ENST00000351288 SH3TC1Q8TE82 1336 aa12.21□□□□□ -0.46
SMPD4-201ENST00000351288 ERICH2A1L162 156 aa12.21□□□□□ -0.46
SMPD4-201ENST00000351288 RNF113AO15541 343 aaKnown RBP12.21□□□□□ -0.46
SMPD4-201ENST00000351288 NR1I2O75469 434 aa12.21□□□□□ -0.46
SMPD4-201ENST00000351288 SLC5A1P13866 664 aa12.21□□□□□ -0.46
SMPD4-201ENST00000351288 ATP5JP18859 108 aa12.21□□□□□ -0.46
SMPD4-201ENST00000351288 MYL10Q9BUA6 226 aa12.21□□□□□ -0.46
SMPD4-201ENST00000351288 KLF18A0A0U1RQI7 1052 aa12.2□□□□□ -0.46
SMPD4-201ENST00000351288 PHKA1P46020 1223 aa12.2□□□□□ -0.46
SMPD4-201ENST00000351288 AKAP17AQ02040 695 aaKnown RBP12.2□□□□□ -0.46
SMPD4-201ENST00000351288 SCRN1Q12765 414 aa12.2□□□□□ -0.46
SMPD4-201ENST00000351288 CCDC87Q9NVE4 849 aa12.2□□□□□ -0.46
SMPD4-201ENST00000351288 UTYO14607 1347 aa12.2□□□□□ -0.46
SMPD4-201ENST00000351288 FOXO4P98177 505 aa12.2□□□□□ -0.46
SMPD4-201ENST00000351288 GIGYF2Q6Y7W6 1299 aaKnown RBP12.2□□□□□ -0.46
SMPD4-201ENST00000351288 TFCP2L1Q9NZI6 479 aa12.2□□□□□ -0.46
SMPD4-201ENST00000351288 DENND2AQ9ULE3 1009 aa12.2□□□□□ -0.46
SMPD4-201ENST00000351288 ZNF652Q9Y2D9 606 aa12.2□□□□□ -0.46
SMPD4-201ENST00000351288 TRIM29Q14134 588 aa12.19□□□□□ -0.46
SMPD4-201ENST00000351288 SCARF1Q14162 830 aa12.19□□□□□ -0.46
SMPD4-201ENST00000351288 ATG9AQ7Z3C6 839 aa12.19□□□□□ -0.46
SMPD4-201ENST00000351288 KLHL34Q8N239 644 aa12.19□□□□□ -0.46
SMPD4-201ENST00000351288 TM6SF1Q9BZW5 370 aa12.19□□□□□ -0.46
SMPD4-201ENST00000351288 RANBP6O60518 1105 aaKnown RBP12.19□□□□□ -0.46
SMPD4-201ENST00000351288 MAP3K12Q12852 859 aa12.19□□□□□ -0.46
SMPD4-201ENST00000351288 ISM2Q6H9L7 571 aa12.19□□□□□ -0.46
SMPD4-201ENST00000351288 TNMDQ9H2S6 317 aa12.19□□□□□ -0.46
SMPD4-201ENST00000351288 DHX16O60231 1041 aaKnown RBP12.19□□□□□ -0.46
SMPD4-201ENST00000351288 PRDM1O75626 825 aa12.19□□□□□ -0.46
SMPD4-201ENST00000351288 BCAMP50895 628 aa12.19□□□□□ -0.46
SMPD4-201ENST00000351288 PDZRN4Q6ZMN7 1036 aaPredicted RBP12.19□□□□□ -0.46
SMPD4-201ENST00000351288 NLRP10Q86W26 655 aa12.19□□□□□ -0.46
SMPD4-201ENST00000351288 NUP62CLQ9H1M0 184 aa12.19□□□□□ -0.46
SMPD4-201ENST00000351288 CTNNA3Q9UI47 895 aa12.19□□□□□ -0.46
SMPD4-201ENST00000351288 MAP3K15Q6ZN16 1313 aa12.19□□□□□ -0.46
SMPD4-201ENST00000351288 BECN2A8MW95 431 aa12.18□□□□□ -0.46
SMPD4-201ENST00000351288 GPAA1O43292 621 aa12.18□□□□□ -0.46
SMPD4-201ENST00000351288 RFC4P35249 363 aa12.18□□□□□ -0.46
SMPD4-201ENST00000351288 STK38Q15208 465 aa12.18□□□□□ -0.46
SMPD4-201ENST00000351288 ANO6Q4KMQ2 910 aa12.18□□□□□ -0.46
SMPD4-201ENST00000351288 ZBTB38Q8NAP3 1195 aaPredicted RBP12.18□□□□□ -0.46
SMPD4-201ENST00000351288 ARMT1Q9H993 441 aa12.18□□□□□ -0.46
SMPD4-201ENST00000351288 MED23Q9ULK4 1368 aa12.18□□□□□ -0.46
SMPD4-201ENST00000351288 LMO7Q8WWI1 1683 aa12.18□□□□□ -0.46
SMPD4-201ENST00000351288 H7C1W4 665 aa12.18□□□□□ -0.46
SMPD4-201ENST00000351288 CCDC152Q4G0S7 254 aa12.18□□□□□ -0.46
SMPD4-201ENST00000351288 CCDC73Q6ZRK6 1079 aa12.18□□□□□ -0.46
SMPD4-201ENST00000351288 DNAJC25Q9H1X3 360 aa12.18□□□□□ -0.46
SMPD4-201ENST00000351288 C5P01031 1676 aa12.18□□□□□ -0.46
SMPD4-201ENST00000351288 M0R2C6 588 aa12.18□□□□□ -0.46
SMPD4-201ENST00000351288 IFIT3O14879 490 aaKnown RBP12.18□□□□□ -0.46
SMPD4-201ENST00000351288 CYP7A1P22680 504 aa12.18□□□□□ -0.46
SMPD4-201ENST00000351288 GYG1P46976 350 aa12.18□□□□□ -0.46
SMPD4-201ENST00000351288 CTSWP56202 376 aa12.18□□□□□ -0.46
SMPD4-201ENST00000351288 LEO1Q8WVC0 666 aaPredicted RBP12.18□□□□□ -0.46
SMPD4-201ENST00000351288 PGBD1Q96JS3 809 aa12.18□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 68.5 ms