RNA–Protein interactions for RNA: ENST00000349379.5

SNX3-202, Transcript of sorting nexin 3, humanhuman

TSL 2 BASIC

Gene SNX3, Length 890 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX3-202ENST00000349379 VGLL2Q8N8G2 317 aa27.63■■■□□ 2.01
SNX3-202ENST00000349379 VIL1P09327 827 aaKnown RBP27.62■■■□□ 2.01
SNX3-202ENST00000349379 FBXO3Q9UK99 471 aa27.62■■■□□ 2.01
SNX3-202ENST00000349379 GNAI2P04899 355 aa27.61■■■□□ 2.01
SNX3-202ENST00000349379 UBE4AQ14139 1066 aa27.61■■■□□ 2.01
SNX3-202ENST00000349379 PNMA8AQ86V59 439 aaPredicted RBP27.61■■■□□ 2.01
SNX3-202ENST00000349379 LDHDQ86WU2 507 aa27.61■■■□□ 2.01
SNX3-202ENST00000349379 DPF2Q92785 391 aa27.61■■■□□ 2.01
SNX3-202ENST00000349379 EYA2O00167 538 aa27.6■■■□□ 2.01
SNX3-202ENST00000349379 ZBTB12Q9Y330 459 aaPredicted RBP27.6■■■□□ 2.01
SNX3-202ENST00000349379 PLIN1O60240 522 aa27.59■■■□□ 2.01
SNX3-202ENST00000349379 RPS12P25398 132 aaKnown RBP27.59■■■□□ 2.01
SNX3-202ENST00000349379 COPRSQ9NQ92 184 aa27.59■■■□□ 2.01
SNX3-202ENST00000349379 ZBTB7BO15156 539 aaPredicted RBP27.58■■■□□ 2.01
SNX3-202ENST00000349379 CIAO1O76071 339 aa27.58■■■□□ 2.01
SNX3-202ENST00000349379 PDE8BO95263 885 aa27.58■■■□□ 2.01
SNX3-202ENST00000349379 CHADLQ6NUI6 762 aa27.58■■■□□ 2.01
SNX3-202ENST00000349379 ATG9AQ7Z3C6 839 aa27.58■■■□□ 2.01
SNX3-202ENST00000349379 ITPRIPQ8IWB1 547 aa27.58■■■□□ 2.01
SNX3-202ENST00000349379 PANK1Q8TE04 598 aa27.58■■■□□ 2.01
SNX3-202ENST00000349379 ADARB2Q9NS39 739 aaKnown RBP27.58■■■□□ 2.01
SNX3-202ENST00000349379 USP17L3A6NCW0 530 aa27.57■■■□□ 2
SNX3-202ENST00000349379 USP17L4A6NCW7 530 aa27.57■■■□□ 2
SNX3-202ENST00000349379 MS4A1P11836 297 aa27.57■■■□□ 2
SNX3-202ENST00000349379 HSPA6P17066 643 aa27.57■■■□□ 2
SNX3-202ENST00000349379 METTL24Q5JXM2 366 aa27.57■■■□□ 2
SNX3-202ENST00000349379 USP50Q70EL3 339 aaPredicted RBP27.57■■■□□ 2
SNX3-202ENST00000349379 USP17L1Q7RTZ2 530 aa27.57■■■□□ 2
SNX3-202ENST00000349379 CD209Q9NNX6 404 aa27.57■■■□□ 2
SNX3-202ENST00000349379 CNOT7Q9UIV1 285 aaKnown RBP27.57■■■□□ 2
SNX3-202ENST00000349379 ARAP2Q8WZ64 1704 aa27.56■■■□□ 2
SNX3-202ENST00000349379 SHTN1A0MZ66 631 aa27.56■■■□□ 2
SNX3-202ENST00000349379 EAPPQ56P03 285 aaPredicted RBP27.56■■■□□ 2
SNX3-202ENST00000349379 RSBN1LQ6PCB5 846 aaPredicted RBP27.56■■■□□ 2
SNX3-202ENST00000349379 GMLQ99445 158 aa27.56■■■□□ 2
SNX3-202ENST00000349379 MYH13Q9UKX3 1938 aa27.56■■■□□ 2
SNX3-202ENST00000349379 SRGAP3O43295 1099 aa27.55■■■□□ 2
SNX3-202ENST00000349379 IL1R1P14778 569 aa27.55■■■□□ 2
SNX3-202ENST00000349379 STRIP1Q5VSL9 837 aa27.55■■■□□ 2
SNX3-202ENST00000349379 MICALL2Q8IY33 904 aa27.55■■■□□ 2
SNX3-202ENST00000349379 AGBL3Q8NEM8 1001 aa27.55■■■□□ 2
SNX3-202ENST00000349379 YTHDC1Q96MU7 727 aaKnown RBP27.55■■■□□ 2
SNX3-202ENST00000349379 PA2G4Q9UQ80 394 aaKnown RBP27.55■■■□□ 2
SNX3-202ENST00000349379 POLR2AP24928 1970 aaKnown RBP27.55■■■□□ 2
SNX3-202ENST00000349379 FGFR2P21802 821 aa27.54■■■□□ 2
SNX3-202ENST00000349379 DACT2Q5SW24 774 aa27.54■■■□□ 2
SNX3-202ENST00000349379 ZNF804AQ7Z570 1209 aa27.54■■■□□ 2
SNX3-202ENST00000349379 PNMA6EA0A0J9YXQ4 647 aa27.52■■■□□ 2
SNX3-202ENST00000349379 TRPM4Q8TD43 1214 aa27.52■■■□□ 2
SNX3-202ENST00000349379 FAM84BQ96KN1 310 aaPredicted RBP27.52■■■□□ 2
SNX3-202ENST00000349379 SIL1Q9H173 461 aa27.52■■■□□ 2
SNX3-202ENST00000349379 TRPM7Q96QT4 1865 aa27.51■■□□□ 1.99
SNX3-202ENST00000349379 H7C1D1 291 aa27.51■■□□□ 1.99
SNX3-202ENST00000349379 IL15P40933 162 aaPredicted RBP27.51■■□□□ 1.99
SNX3-202ENST00000349379 HIRAP54198 1017 aaPredicted RBP27.51■■□□□ 1.99
SNX3-202ENST00000349379 MVPQ14764 893 aaKnown RBP27.51■■□□□ 1.99
SNX3-202ENST00000349379 MYO3BQ8WXR4 1341 aa27.5■■□□□ 1.99
SNX3-202ENST00000349379 ZNF280AP59817 542 aaPredicted RBP27.5■■□□□ 1.99
SNX3-202ENST00000349379 PUM3Q15397 648 aaKnown RBP27.5■■□□□ 1.99
SNX3-202ENST00000349379 TTLL5Q6EMB2 1281 aa27.5■■□□□ 1.99
SNX3-202ENST00000349379 PASKQ96RG2 1323 aa27.49■■□□□ 1.99
SNX3-202ENST00000349379 ITGBL1O95965 494 aaPredicted RBP27.49■■□□□ 1.99
SNX3-202ENST00000349379 GYG1P46976 350 aa27.49■■□□□ 1.99
SNX3-202ENST00000349379 POLA2Q14181 598 aa27.49■■□□□ 1.99
SNX3-202ENST00000349379 FBXO33Q7Z6M2 555 aa27.49■■□□□ 1.99
SNX3-202ENST00000349379 TDRD7Q8NHU6 1098 aaKnown RBP27.49■■□□□ 1.99
SNX3-202ENST00000349379 C1orf115Q9H7X2 142 aa27.49■■□□□ 1.99
SNX3-202ENST00000349379 PGAP2Q9UHJ9 254 aa27.49■■□□□ 1.99
SNX3-202ENST00000349379 CLEC11AQ9Y240 323 aa27.49■■□□□ 1.99
SNX3-202ENST00000349379 HIBADHP31937 336 aaKnown RBP27.48■■□□□ 1.99
SNX3-202ENST00000349379 GTF2IP78347 998 aa27.48■■□□□ 1.99
SNX3-202ENST00000349379 ATP8B2P98198 1209 aa27.48■■□□□ 1.99
SNX3-202ENST00000349379 PDE3AQ14432 1141 aa27.48■■□□□ 1.99
SNX3-202ENST00000349379 SAMD7Q7Z3H4 446 aa27.48■■□□□ 1.99
SNX3-202ENST00000349379 SSH3Q8TE77 659 aa27.48■■□□□ 1.99
SNX3-202ENST00000349379 MXD3Q9BW11 206 aa27.48■■□□□ 1.99
SNX3-202ENST00000349379 EGFRP00533 1210 aa27.47■■□□□ 1.99
SNX3-202ENST00000349379 MAP1SQ66K74 1059 aaPredicted RBP27.47■■□□□ 1.99
SNX3-202ENST00000349379 GOLGA6L2Q8N9W4 650 aaPredicted RBP27.47■■□□□ 1.99
SNX3-202ENST00000349379 ZC3H15Q8WU90 426 aaKnown RBP27.47■■□□□ 1.99
SNX3-202ENST00000349379 COG6Q9Y2V7 657 aa27.47■■□□□ 1.99
SNX3-202ENST00000349379 FAM205AQ6ZU69 1335 aa27.46■■□□□ 1.99
SNX3-202ENST00000349379 IFIT1P09914 478 aaKnown RBP27.46■■□□□ 1.99
SNX3-202ENST00000349379 APLP1P51693 650 aa27.46■■□□□ 1.99
SNX3-202ENST00000349379 CNTROBQ8N137 903 aa27.46■■□□□ 1.99
SNX3-202ENST00000349379 LPIN2Q92539 896 aa27.46■■□□□ 1.99
SNX3-202ENST00000349379 CEP126Q9P2H0 1117 aa27.46■■□□□ 1.99
SNX3-202ENST00000349379 DDX19BQ9UMR2 479 aa27.46■■□□□ 1.99
SNX3-202ENST00000349379 ECM29Q5VYK3 1845 aa27.46■■□□□ 1.99
SNX3-202ENST00000349379 SASH1O94885 1247 aa27.45■■□□□ 1.98
SNX3-202ENST00000349379 USP17L8P0C7I0 530 aa27.45■■□□□ 1.98
SNX3-202ENST00000349379 FKBP1AP62942 108 aaKnown RBP27.45■■□□□ 1.98
SNX3-202ENST00000349379 FBXW7Q969H0 707 aa27.45■■□□□ 1.98
SNX3-202ENST00000349379 TBC1D10BQ4KMP7 808 aaPredicted RBP27.44■■□□□ 1.98
SNX3-202ENST00000349379 C20orf194Q5TEA3 1177 aa27.44■■□□□ 1.98
SNX3-202ENST00000349379 SLC5A1P13866 664 aa27.43■■□□□ 1.98
SNX3-202ENST00000349379 ATP2B3Q16720 1220 aa27.43■■□□□ 1.98
SNX3-202ENST00000349379 KIF4BQ2VIQ3 1234 aa27.43■■□□□ 1.98
SNX3-202ENST00000349379 CAVIN4Q5BKX8 364 aa27.43■■□□□ 1.98
SNX3-202ENST00000349379 CEP85Q6P2H3 762 aa27.43■■□□□ 1.98
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms