RNA–Protein interactions for RNA: ENST00000348987.4

SCARF1-202, Transcript of scavenger receptor class F member 1, humanhuman

TSL 1 (best) BASIC

Gene SCARF1, Length 2,619 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-202ENST00000348987 PPP1R13BQ96KQ4 1090 aa21.76■■□□□ 1.07
SCARF1-202ENST00000348987 RGPD5Q99666 1765 aa21.76■■□□□ 1.07
SCARF1-202ENST00000348987 CSB-PGBD3P0DP91 1061 aa21.76■■□□□ 1.07
SCARF1-202ENST00000348987 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP21.76■■□□□ 1.07
SCARF1-202ENST00000348987 GCKRQ14397 625 aa21.76■■□□□ 1.07
SCARF1-202ENST00000348987 SLC52A2Q9HAB3 445 aa21.75■■□□□ 1.07
SCARF1-202ENST00000348987 SLIT3O75094 1523 aa21.75■■□□□ 1.07
SCARF1-202ENST00000348987 JAK2O60674 1132 aa21.75■■□□□ 1.07
SCARF1-202ENST00000348987 ZRANB2O95218 330 aaKnown RBP eCLIP21.75■■□□□ 1.07
SCARF1-202ENST00000348987 TEX35Q5T0J7 233 aa21.75■■□□□ 1.07
SCARF1-202ENST00000348987 NBPF11Q86T75 865 aa21.75■■□□□ 1.07
SCARF1-202ENST00000348987 ERCC4Q92889 916 aaPredicted RBP21.75■■□□□ 1.07
SCARF1-202ENST00000348987 OVOS2A0A0G2JMS6 1433 aa21.74■■□□□ 1.07
SCARF1-202ENST00000348987 KDM6AO15550 1401 aaPredicted RBP21.74■■□□□ 1.07
SCARF1-202ENST00000348987 PSMA5P28066 241 aa21.74■■□□□ 1.07
SCARF1-202ENST00000348987 ST5P78524 1137 aa21.74■■□□□ 1.07
SCARF1-202ENST00000348987 TOB2Q14106 344 aaPredicted RBP21.74■■□□□ 1.07
SCARF1-202ENST00000348987 BLOC1S2Q6QNY1 142 aa21.74■■□□□ 1.07
SCARF1-202ENST00000348987 TMCO3Q6UWJ1 677 aa21.74■■□□□ 1.07
SCARF1-202ENST00000348987 CERS3Q8IU89 383 aa21.74■■□□□ 1.07
SCARF1-202ENST00000348987 AOPEPQ8N6M6 819 aa21.74■■□□□ 1.07
SCARF1-202ENST00000348987 RAPGEF4Q8WZA2 1011 aa21.74■■□□□ 1.07
SCARF1-202ENST00000348987 HDAC5Q9UQL6 1122 aa21.74■■□□□ 1.07
SCARF1-202ENST00000348987 GSDMDP57764 484 aa21.73■■□□□ 1.07
SCARF1-202ENST00000348987 RESTQ13127 1097 aa21.73■■□□□ 1.07
SCARF1-202ENST00000348987 CCAR1Q8IX12 1150 aaKnown RBP21.73■■□□□ 1.07
SCARF1-202ENST00000348987 ZCCHC17Q9NP64 241 aaKnown RBP21.73■■□□□ 1.07
SCARF1-202ENST00000348987 SEC31AO94979 1220 aaKnown RBP21.72■■□□□ 1.07
SCARF1-202ENST00000348987 KRBA2Q6ZNG9 492 aa21.72■■□□□ 1.07
SCARF1-202ENST00000348987 NEXNQ0ZGT2 675 aa21.72■■□□□ 1.07
SCARF1-202ENST00000348987 UBXN4Q92575 508 aa21.72■■□□□ 1.07
SCARF1-202ENST00000348987 BRF1Q92994 677 aa21.72■■□□□ 1.07
SCARF1-202ENST00000348987 SMARCE1Q969G3 411 aa21.72■■□□□ 1.07
SCARF1-202ENST00000348987 GOLPH3LQ9H4A5 285 aa21.72■■□□□ 1.07
SCARF1-202ENST00000348987 DBNLQ9UJU6 430 aaKnown RBP21.72■■□□□ 1.07
SCARF1-202ENST00000348987 ATP5J2-PTCD1G3V325 749 aa21.71■■□□□ 1.07
SCARF1-202ENST00000348987 PTCD1O75127 700 aaKnown RBP21.71■■□□□ 1.07
SCARF1-202ENST00000348987 PHKG2P15735 406 aa21.71■■□□□ 1.07
SCARF1-202ENST00000348987 TPM4P67936 248 aa21.71■■□□□ 1.07
SCARF1-202ENST00000348987 ANKRD1Q15327 319 aa21.71■■□□□ 1.07
SCARF1-202ENST00000348987 LRP10Q7Z4F1 713 aa21.71■■□□□ 1.07
SCARF1-202ENST00000348987 FTOQ9C0B1 505 aaKnown RBP eCLIP21.71■■□□□ 1.07
SCARF1-202ENST00000348987 TRPM3Q9HCF6 1732 aaPredicted RBP21.71■■□□□ 1.07
SCARF1-202ENST00000348987 COL15A1P39059 1388 aa21.71■■□□□ 1.07
SCARF1-202ENST00000348987 RPS6KB1P23443 525 aa21.71■■□□□ 1.07
SCARF1-202ENST00000348987 METTL22Q9BUU2 404 aaPredicted RBP21.71■■□□□ 1.07
SCARF1-202ENST00000348987 OSBPL5Q9H0X9 879 aaPredicted RBP21.71■■□□□ 1.07
SCARF1-202ENST00000348987 ARGLU1Q9NWB6 273 aaPredicted RBP21.71■■□□□ 1.07
SCARF1-202ENST00000348987 ORC3Q9UBD5 711 aaPredicted RBP21.71■■□□□ 1.07
SCARF1-202ENST00000348987 H3BQV1 296 aa21.7■■□□□ 1.06
SCARF1-202ENST00000348987 CTAGE5O15320 804 aa21.7■■□□□ 1.06
SCARF1-202ENST00000348987 IFFO2Q5TF58 517 aa21.7■■□□□ 1.06
SCARF1-202ENST00000348987 ARMCX5Q6P1M9 558 aa21.7■■□□□ 1.06
SCARF1-202ENST00000348987 ANKRD13DQ6ZTN6 518 aa21.7■■□□□ 1.06
SCARF1-202ENST00000348987 UBE3BQ7Z3V4 1068 aa21.7■■□□□ 1.06
SCARF1-202ENST00000348987 HOMER1Q86YM7 354 aa21.7■■□□□ 1.06
SCARF1-202ENST00000348987 CFAP45Q9UL16 551 aa21.7■■□□□ 1.06
SCARF1-202ENST00000348987 CCDC9Q9Y3X0 531 aaKnown RBP21.7■■□□□ 1.06
SCARF1-202ENST00000348987 TFCP2Q12800 502 aa21.7■■□□□ 1.06
SCARF1-202ENST00000348987 TXLNBQ8N3L3 684 aa21.7■■□□□ 1.06
SCARF1-202ENST00000348987 SNRKQ9NRH2 765 aa21.7■■□□□ 1.06
SCARF1-202ENST00000348987 ANO10Q9NW15 660 aa21.7■■□□□ 1.06
SCARF1-202ENST00000348987 MED23Q9ULK4 1368 aa21.7■■□□□ 1.06
SCARF1-202ENST00000348987 SEC62Q99442 399 aaKnown RBP21.69■■□□□ 1.06
SCARF1-202ENST00000348987 SIPA1L3O60292 1781 aaPredicted RBP21.69■■□□□ 1.06
SCARF1-202ENST00000348987 HIP1O00291 1037 aa21.69■■□□□ 1.06
SCARF1-202ENST00000348987 TNNT3P45378 269 aaPredicted RBP21.69■■□□□ 1.06
SCARF1-202ENST00000348987 PTPN12Q05209 780 aaKnown RBP21.69■■□□□ 1.06
SCARF1-202ENST00000348987 CCDC129Q6ZRS4 1044 aa21.69■■□□□ 1.06
SCARF1-202ENST00000348987 DNAI1Q9UI46 699 aa21.69■■□□□ 1.06
SCARF1-202ENST00000348987 TAF5LO75529 589 aa21.68■■□□□ 1.06
SCARF1-202ENST00000348987 TMC6Q7Z403 805 aa21.68■■□□□ 1.06
SCARF1-202ENST00000348987 CEP57L1Q8IYX8 460 aa21.68■■□□□ 1.06
SCARF1-202ENST00000348987 PSDA5PKW4 1024 aaPredicted RBP21.68■■□□□ 1.06
SCARF1-202ENST00000348987 RFX5P48382 616 aaPredicted RBP21.68■■□□□ 1.06
SCARF1-202ENST00000348987 MEGF6O75095 1541 aa21.68■■□□□ 1.06
SCARF1-202ENST00000348987 MST1RQ04912 1400 aa21.67■■□□□ 1.06
SCARF1-202ENST00000348987 CYP27B1O15528 508 aa21.67■■□□□ 1.06
SCARF1-202ENST00000348987 EPC1Q9H2F5 836 aa21.67■■□□□ 1.06
SCARF1-202ENST00000348987 IMPACTQ9P2X3 320 aa21.67■■□□□ 1.06
SCARF1-202ENST00000348987 RSPH14Q9UHP6 348 aa21.67■■□□□ 1.06
SCARF1-202ENST00000348987 KINO60870 393 aaKnown RBP21.67■■□□□ 1.06
SCARF1-202ENST00000348987 SMC2O95347 1197 aa21.67■■□□□ 1.06
SCARF1-202ENST00000348987 MUM1L1Q5H9M0 696 aa21.67■■□□□ 1.06
SCARF1-202ENST00000348987 XPO4Q9C0E2 1151 aaKnown RBP21.67■■□□□ 1.06
SCARF1-202ENST00000348987 C5P01031 1676 aa21.67■■□□□ 1.06
SCARF1-202ENST00000348987 SASH3O75995 380 aa21.66■■□□□ 1.06
SCARF1-202ENST00000348987 SFPQP23246 707 aaKnown RBP eCLIP21.66■■□□□ 1.06
SCARF1-202ENST00000348987 FOSBP53539 338 aa21.66■■□□□ 1.06
SCARF1-202ENST00000348987 CCDC73Q6ZRK6 1079 aa21.66■■□□□ 1.06
SCARF1-202ENST00000348987 ZFP91Q96JP5 570 aaPredicted RBP21.66■■□□□ 1.06
SCARF1-202ENST00000348987 STRCP1A6NGW2 1772 aa21.66■■□□□ 1.06
SCARF1-202ENST00000348987 TRIM66O15016 1216 aa21.66■■□□□ 1.06
SCARF1-202ENST00000348987 OAS2P29728 719 aaKnown RBP21.66■■□□□ 1.06
SCARF1-202ENST00000348987 TNNI3KQ59H18 835 aa21.66■■□□□ 1.06
SCARF1-202ENST00000348987 MNS1Q8NEH6 495 aa21.66■■□□□ 1.06
SCARF1-202ENST00000348987 DBNDD2Q9BQY9 259 aa21.66■■□□□ 1.06
SCARF1-202ENST00000348987 FPGT-TNNI3KV9GXZ4 949 aa21.66■■□□□ 1.06
SCARF1-202ENST00000348987 TATP17735 454 aaPredicted RBP21.65■■□□□ 1.06
SCARF1-202ENST00000348987 ADD1P35611 737 aaKnown RBP21.65■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 206 ms