RNA–Protein interactions for RNA: ENST00000348962.6

PTPRO-202, Transcript of protein tyrosine phosphatase, receptor type O, humanhuman

TSL 1 (best) BASIC

Gene PTPRO, Length 5,061 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRO-202ENST00000348962 SUPT20HQ8NEM7 779 aa17.65■□□□□ 0.42
PTPRO-202ENST00000348962 TCEANC2Q96MN5 208 aa17.65■□□□□ 0.42
PTPRO-202ENST00000348962 SPAG5Q96R06 1193 aa17.65■□□□□ 0.42
PTPRO-202ENST00000348962 IMPG2Q9BZV3 1241 aa17.65■□□□□ 0.42
PTPRO-202ENST00000348962 NEMFO60524 1076 aa17.64■□□□□ 0.42
PTPRO-202ENST00000348962 GSDMDP57764 484 aa17.64■□□□□ 0.42
PTPRO-202ENST00000348962 Q6ZUG5 572 aa17.64■□□□□ 0.42
PTPRO-202ENST00000348962 TAOK3Q9H2K8 898 aa17.64■□□□□ 0.42
PTPRO-202ENST00000348962 PDE8AO60658 829 aa17.64■□□□□ 0.41
PTPRO-202ENST00000348962 CCDC91Q7Z6B0 441 aa17.64■□□□□ 0.41
PTPRO-202ENST00000348962 NECAB1Q8N987 351 aa17.64■□□□□ 0.41
PTPRO-202ENST00000348962 BIN2Q9UBW5 565 aaPredicted RBP17.64■□□□□ 0.41
PTPRO-202ENST00000348962 ACTN2P35609 894 aa17.64■□□□□ 0.41
PTPRO-202ENST00000348962 UBE2HP62256 183 aa17.64■□□□□ 0.41
PTPRO-202ENST00000348962 VSIG10Q8N0Z9 540 aa17.64■□□□□ 0.41
PTPRO-202ENST00000348962 LARGE2Q8N3Y3 721 aa17.64■□□□□ 0.41
PTPRO-202ENST00000348962 TMCO5BA8MYB1 307 aa17.64■□□□□ 0.41
PTPRO-202ENST00000348962 EYA2O00167 538 aa17.64■□□□□ 0.41
PTPRO-202ENST00000348962 N4BP3O15049 544 aa17.64■□□□□ 0.41
PTPRO-202ENST00000348962 GDPD2Q9HCC8 539 aa17.64■□□□□ 0.41
PTPRO-202ENST00000348962 PICK1Q9NRD5 415 aa17.64■□□□□ 0.41
PTPRO-202ENST00000348962 ZNF165P49910 485 aa17.63■□□□□ 0.41
PTPRO-202ENST00000348962 KIF18AQ8NI77 898 aa17.63■□□□□ 0.41
PTPRO-202ENST00000348962 CCDC102AQ96A19 550 aa17.63■□□□□ 0.41
PTPRO-202ENST00000348962 TMX3Q96JJ7 454 aa17.63■□□□□ 0.41
PTPRO-202ENST00000348962 DNA2P51530 1060 aa17.63■□□□□ 0.41
PTPRO-202ENST00000348962 TESK2Q96S53 571 aa17.63■□□□□ 0.41
PTPRO-202ENST00000348962 APBA3O96018 575 aa17.63■□□□□ 0.41
PTPRO-202ENST00000348962 NOP2P46087 812 aaKnown RBP17.63■□□□□ 0.41
PTPRO-202ENST00000348962 SPAG1Q07617 926 aa17.63■□□□□ 0.41
PTPRO-202ENST00000348962 CERS3Q8IU89 383 aa17.63■□□□□ 0.41
PTPRO-202ENST00000348962 TSPYL6Q8N831 410 aa17.63■□□□□ 0.41
PTPRO-202ENST00000348962 TNPO1Q92973 898 aaKnown RBP17.63■□□□□ 0.41
PTPRO-202ENST00000348962 ITGA6P23229 1130 aa17.63■□□□□ 0.41
PTPRO-202ENST00000348962 MAP9Q49MG5 647 aa17.63■□□□□ 0.41
PTPRO-202ENST00000348962 DPP8Q6V1X1 898 aaPredicted RBP17.63■□□□□ 0.41
PTPRO-202ENST00000348962 TBC1D5Q92609 795 aa17.63■□□□□ 0.41
PTPRO-202ENST00000348962 METTL22Q9BUU2 404 aaPredicted RBP17.63■□□□□ 0.41
PTPRO-202ENST00000348962 PTPRKQ15262 1439 aa17.63■□□□□ 0.41
PTPRO-202ENST00000348962 HCLS1P14317 486 aaPredicted RBP17.62■□□□□ 0.41
PTPRO-202ENST00000348962 MCM3P25205 808 aa17.62■□□□□ 0.41
PTPRO-202ENST00000348962 SKAP1Q86WV1 359 aa17.62■□□□□ 0.41
PTPRO-202ENST00000348962 BICC1Q9H694 974 aaKnown RBP17.62■□□□□ 0.41
PTPRO-202ENST00000348962 SYNCQ9H7C4 482 aa17.62■□□□□ 0.41
PTPRO-202ENST00000348962 KRT24Q2M2I5 525 aa17.62■□□□□ 0.41
PTPRO-202ENST00000348962 DCTPP1Q9H773 170 aa17.62■□□□□ 0.41
PTPRO-202ENST00000348962 JAG2Q9Y219 1238 aa17.62■□□□□ 0.41
PTPRO-202ENST00000348962 SBNO2Q9Y2G9 1366 aa17.62■□□□□ 0.41
PTPRO-202ENST00000348962 CCDC66A2RUB6 948 aa17.62■□□□□ 0.41
PTPRO-202ENST00000348962 RRAGBQ5VZM2 374 aa17.62■□□□□ 0.41
PTPRO-202ENST00000348962 PSMA7O14818 248 aa17.62■□□□□ 0.41
PTPRO-202ENST00000348962 TNNT1P13805 278 aa17.62■□□□□ 0.41
PTPRO-202ENST00000348962 PUM3Q15397 648 aaKnown RBP17.62■□□□□ 0.41
PTPRO-202ENST00000348962 NAA15Q9BXJ9 866 aaKnown RBP17.62■□□□□ 0.41
PTPRO-202ENST00000348962 URI1O94763 535 aaPredicted RBP17.61■□□□□ 0.41
PTPRO-202ENST00000348962 ZSCAN22P10073 491 aaPredicted RBP17.61■□□□□ 0.41
PTPRO-202ENST00000348962 CEP85Q6P2H3 762 aa17.61■□□□□ 0.41
PTPRO-202ENST00000348962 PCDHB15Q9Y5E8 787 aa17.61■□□□□ 0.41
PTPRO-202ENST00000348962 WDR66Q8TBY9 1149 aa17.61■□□□□ 0.41
PTPRO-202ENST00000348962 PLVAPQ9BX97 442 aa17.61■□□□□ 0.41
PTPRO-202ENST00000348962 TMOD4Q9NZQ9 345 aa17.61■□□□□ 0.41
PTPRO-202ENST00000348962 KIAA0556O60303 1618 aa17.61■□□□□ 0.41
PTPRO-202ENST00000348962 RAD50Q92878 1312 aa17.61■□□□□ 0.41
PTPRO-202ENST00000348962 AKR1B10O60218 316 aa17.61■□□□□ 0.41
PTPRO-202ENST00000348962 CASQ1P31415 396 aa17.61■□□□□ 0.41
PTPRO-202ENST00000348962 ASIC1P78348 528 aa17.61■□□□□ 0.41
PTPRO-202ENST00000348962 SLC52A2Q9HAB3 445 aa17.61■□□□□ 0.41
PTPRO-202ENST00000348962 KIF4AO95239 1232 aa17.6■□□□□ 0.41
PTPRO-202ENST00000348962 IFI16Q16666 785 aaKnown RBP17.6■□□□□ 0.41
PTPRO-202ENST00000348962 BRDTQ58F21 947 aaPredicted RBP17.6■□□□□ 0.41
PTPRO-202ENST00000348962 DYDC1Q8WWB3 177 aa17.6■□□□□ 0.41
PTPRO-202ENST00000348962 NAP1L4Q99733 375 aaKnown RBP17.6■□□□□ 0.41
PTPRO-202ENST00000348962 CARD14Q9BXL6 1004 aa17.6■□□□□ 0.41
PTPRO-202ENST00000348962 COMMD10Q9Y6G5 202 aa17.6■□□□□ 0.41
PTPRO-202ENST00000348962 EDC4Q6P2E9 1401 aaKnown RBP17.6■□□□□ 0.41
PTPRO-202ENST00000348962 ESPNB1AK53 854 aa17.6■□□□□ 0.41
PTPRO-202ENST00000348962 AFMP43652 599 aa17.6■□□□□ 0.41
PTPRO-202ENST00000348962 MMRN2Q9H8L6 949 aa17.6■□□□□ 0.41
PTPRO-202ENST00000348962 BACH1O14867 736 aa17.6■□□□□ 0.41
PTPRO-202ENST00000348962 HS2ST1Q7LGA3 356 aa17.6■□□□□ 0.41
PTPRO-202ENST00000348962 GTPBP4Q9BZE4 634 aaKnown RBP17.6■□□□□ 0.41
PTPRO-202ENST00000348962 BEGAINQ9BUH8 593 aa17.6■□□□□ 0.41
PTPRO-202ENST00000348962 SHANK2Q9UPX8 1470 aa17.59■□□□□ 0.41
PTPRO-202ENST00000348962 FLAD1Q8NFF5 587 aa17.59■□□□□ 0.41
PTPRO-202ENST00000348962 ARHGEF10LQ9HCE6 1279 aa17.59■□□□□ 0.41
PTPRO-202ENST00000348962 PARD3Q8TEW0 1356 aa17.59■□□□□ 0.41
PTPRO-202ENST00000348962 MBD4O95243 580 aa17.59■□□□□ 0.41
PTPRO-202ENST00000348962 PARP1P09874 1014 aaKnown RBP17.59■□□□□ 0.41
PTPRO-202ENST00000348962 IFFO1Q0D2I5 559 aa17.59■□□□□ 0.41
PTPRO-202ENST00000348962 RAB3GAP1Q15042 981 aa17.59■□□□□ 0.41
PTPRO-202ENST00000348962 MRPS27Q92552 414 aaKnown RBP17.59■□□□□ 0.41
PTPRO-202ENST00000348962 DHX32Q7L7V1 743 aaKnown RBP17.59■□□□□ 0.41
PTPRO-202ENST00000348962 TMC6Q7Z403 805 aa17.59■□□□□ 0.41
PTPRO-202ENST00000348962 TBC1D32Q96NH3 1257 aa17.59■□□□□ 0.41
PTPRO-202ENST00000348962 CCDC113Q9H0I3 377 aa17.59■□□□□ 0.41
PTPRO-202ENST00000348962 CCDC171Q6TFL3 1326 aa17.59■□□□□ 0.41
PTPRO-202ENST00000348962 EIF2AK4Q9P2K8 1649 aaKnown RBP17.59■□□□□ 0.41
PTPRO-202ENST00000348962 GOLGA6L9A6NEM1 432 aa17.59■□□□□ 0.41
PTPRO-202ENST00000348962 PRPF4BQ13523 1007 aaKnown RBP17.59■□□□□ 0.41
PTPRO-202ENST00000348962 ZSCAN30Q86W11 494 aa17.59■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms