RNA–Protein interactions for RNA: ENST00000348749.9

CHRNA1-202, Transcript of cholinergic receptor nicotinic alpha 1 subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHRNA1, Length 1,984 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1-202ENST00000348749 AMOTQ4VCS5 1084 aa12□□□□□ -0.49
CHRNA1-202ENST00000348749 BLOC1S2Q6QNY1 142 aa12□□□□□ -0.49
CHRNA1-202ENST00000348749 KSR2Q6VAB6 950 aa12□□□□□ -0.49
CHRNA1-202ENST00000348749 GPR161Q8N6U8 529 aaKnown RBP12□□□□□ -0.49
CHRNA1-202ENST00000348749 NFAT5O94916 1531 aa12□□□□□ -0.49
CHRNA1-202ENST00000348749 SLC27A2O14975 620 aa11.99□□□□□ -0.49
CHRNA1-202ENST00000348749 IVLP07476 585 aa11.99□□□□□ -0.49
CHRNA1-202ENST00000348749 SFPQP23246 707 aaKnown RBP eCLIP11.99□□□□□ -0.49
CHRNA1-202ENST00000348749 RPS6KB1P23443 525 aa11.99□□□□□ -0.49
CHRNA1-202ENST00000348749 ACTN2P35609 894 aa11.99□□□□□ -0.49
CHRNA1-202ENST00000348749 MMP14P50281 582 aa11.99□□□□□ -0.49
CHRNA1-202ENST00000348749 NOM1Q5C9Z4 860 aaKnown RBP11.99□□□□□ -0.49
CHRNA1-202ENST00000348749 TRIM65Q6PJ69 517 aa11.99□□□□□ -0.49
CHRNA1-202ENST00000348749 AOPEPQ8N6M6 819 aa11.99□□□□□ -0.49
CHRNA1-202ENST00000348749 ZFP91Q96JP5 570 aaPredicted RBP11.99□□□□□ -0.49
CHRNA1-202ENST00000348749 BPIFA3Q9BQP9 254 aa11.99□□□□□ -0.49
CHRNA1-202ENST00000348749 C9orf78Q9NZ63 289 aaPredicted RBP11.99□□□□□ -0.49
CHRNA1-202ENST00000348749 A0A1B0GUL7 405 aa11.99□□□□□ -0.49
CHRNA1-202ENST00000348749 RPS6KA5O75582 802 aa11.99□□□□□ -0.49
CHRNA1-202ENST00000348749 EIF2S2P20042 333 aaKnown RBP11.99□□□□□ -0.49
CHRNA1-202ENST00000348749 TEFQ10587 303 aa11.99□□□□□ -0.49
CHRNA1-202ENST00000348749 LINS1Q8NG48 757 aa11.99□□□□□ -0.49
CHRNA1-202ENST00000348749 SLC26A8Q96RN1 970 aa11.99□□□□□ -0.49
CHRNA1-202ENST00000348749 NPHP4O75161 1426 aaPredicted RBP11.99□□□□□ -0.49
CHRNA1-202ENST00000348749 DDX58O95786 925 aaKnown RBP11.98□□□□□ -0.49
CHRNA1-202ENST00000348749 GUCY2CP25092 1073 aa11.98□□□□□ -0.49
CHRNA1-202ENST00000348749 PSME1Q06323 249 aa11.98□□□□□ -0.49
CHRNA1-202ENST00000348749 PLEKHO1Q53GL0 409 aaPredicted RBP11.98□□□□□ -0.49
CHRNA1-202ENST00000348749 USPL1Q5W0Q7 1092 aa11.98□□□□□ -0.49
CHRNA1-202ENST00000348749 ATL3Q6DD88 541 aa11.98□□□□□ -0.49
CHRNA1-202ENST00000348749 HOMER1Q86YM7 354 aa11.98□□□□□ -0.49
CHRNA1-202ENST00000348749 ARFGAP3Q9NP61 516 aa11.98□□□□□ -0.49
CHRNA1-202ENST00000348749 ZCCHC17Q9NP64 241 aaKnown RBP11.98□□□□□ -0.49
CHRNA1-202ENST00000348749 ADAM21Q9UKJ8 722 aa11.98□□□□□ -0.49
CHRNA1-202ENST00000348749 RCOR1Q9UKL0 485 aa11.98□□□□□ -0.49
CHRNA1-202ENST00000348749 SIPA1L3O60292 1781 aaPredicted RBP11.98□□□□□ -0.49
CHRNA1-202ENST00000348749 ADAMTS7Q9UKP4 1686 aa11.98□□□□□ -0.49
CHRNA1-202ENST00000348749 BTBD11A6QL63 1104 aa11.98□□□□□ -0.49
CHRNA1-202ENST00000348749 MAGEA9P43362 315 aa11.98□□□□□ -0.49
CHRNA1-202ENST00000348749 EVCP57679 992 aa11.98□□□□□ -0.49
CHRNA1-202ENST00000348749 G3BP1Q13283 466 aaKnown RBP eCLIP11.98□□□□□ -0.49
CHRNA1-202ENST00000348749 GORABQ5T7V8 394 aa11.98□□□□□ -0.49
CHRNA1-202ENST00000348749 JAKMIP3Q5VZ66 844 aa11.98□□□□□ -0.49
CHRNA1-202ENST00000348749 AACSQ86V21 672 aa11.98□□□□□ -0.49
CHRNA1-202ENST00000348749 FCHSD1Q86WN1 690 aa11.98□□□□□ -0.49
CHRNA1-202ENST00000348749 CCAR1Q8IX12 1150 aaKnown RBP11.98□□□□□ -0.49
CHRNA1-202ENST00000348749 ABTB2Q8N961 1025 aa11.98□□□□□ -0.49
CHRNA1-202ENST00000348749 ENGASEQ8NFI3 743 aa11.98□□□□□ -0.49
CHRNA1-202ENST00000348749 CHMP4CQ96CF2 233 aa11.98□□□□□ -0.49
CHRNA1-202ENST00000348749 CARD6Q9BX69 1037 aa11.98□□□□□ -0.49
CHRNA1-202ENST00000348749 FUT8Q9BYC5 575 aa11.98□□□□□ -0.49
CHRNA1-202ENST00000348749 PARP3Q9Y6F1 533 aa11.98□□□□□ -0.49
CHRNA1-202ENST00000348749 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP11.97□□□□□ -0.49
CHRNA1-202ENST00000348749 KINO60870 393 aaKnown RBP11.97□□□□□ -0.49
CHRNA1-202ENST00000348749 NMIQ13287 307 aaPredicted RBP11.97□□□□□ -0.49
CHRNA1-202ENST00000348749 TOB2Q14106 344 aaPredicted RBP11.97□□□□□ -0.49
CHRNA1-202ENST00000348749 CCDC73Q6ZRK6 1079 aa11.97□□□□□ -0.49
CHRNA1-202ENST00000348749 TMC6Q7Z403 805 aa11.97□□□□□ -0.49
CHRNA1-202ENST00000348749 MSL3Q8N5Y2 521 aaKnown RBP11.97□□□□□ -0.49
CHRNA1-202ENST00000348749 KCNH5Q8NCM2 988 aa11.97□□□□□ -0.49
CHRNA1-202ENST00000348749 CERKQ8TCT0 537 aa11.97□□□□□ -0.49
CHRNA1-202ENST00000348749 NCAPGQ9BPX3 1015 aa11.97□□□□□ -0.49
CHRNA1-202ENST00000348749 GOLPH3LQ9H4A5 285 aa11.97□□□□□ -0.49
CHRNA1-202ENST00000348749 CAMTA1Q9Y6Y1 1673 aa11.97□□□□□ -0.49
CHRNA1-202ENST00000348749 GRM8O00222 908 aa11.96□□□□□ -0.49
CHRNA1-202ENST00000348749 URI1O94763 535 aaPredicted RBP11.96□□□□□ -0.49
CHRNA1-202ENST00000348749 ADD1P35611 737 aaKnown RBP11.96□□□□□ -0.49
CHRNA1-202ENST00000348749 GYS2P54840 703 aa11.96□□□□□ -0.49
CHRNA1-202ENST00000348749 FAM160A1Q05DH4 1040 aa11.96□□□□□ -0.49
CHRNA1-202ENST00000348749 RSRC2Q7L4I2 434 aaKnown RBP11.96□□□□□ -0.49
CHRNA1-202ENST00000348749 MPHOSPH8Q99549 860 aa11.96□□□□□ -0.49
CHRNA1-202ENST00000348749 LLPHQ9BRT6 129 aaKnown RBP11.96□□□□□ -0.49
CHRNA1-202ENST00000348749 XPO4Q9C0E2 1151 aaKnown RBP11.96□□□□□ -0.49
CHRNA1-202ENST00000348749 MAP3K2Q9Y2U5 619 aa11.96□□□□□ -0.49
CHRNA1-202ENST00000348749 LMAN1P49257 510 aa11.96□□□□□ -0.5
CHRNA1-202ENST00000348749 TTC31Q49AM3 519 aaPredicted RBP11.96□□□□□ -0.5
CHRNA1-202ENST00000348749 LEKR1Q6ZMV7 388 aa11.96□□□□□ -0.5
CHRNA1-202ENST00000348749 RABGGTAQ92696 567 aa11.96□□□□□ -0.5
CHRNA1-202ENST00000348749 BRF1Q92994 677 aa11.96□□□□□ -0.5
CHRNA1-202ENST00000348749 SYTL4Q96C24 671 aaPredicted RBP11.96□□□□□ -0.5
CHRNA1-202ENST00000348749 MYCBPQ99417 103 aaPredicted RBP11.96□□□□□ -0.5
CHRNA1-202ENST00000348749 COL15A1P39059 1388 aa11.95□□□□□ -0.5
CHRNA1-202ENST00000348749 ABCC6O95255 1503 aa11.95□□□□□ -0.5
CHRNA1-202ENST00000348749 MAP2K7O14733 419 aa11.95□□□□□ -0.5
CHRNA1-202ENST00000348749 FANCGO15287 622 aa11.95□□□□□ -0.5
CHRNA1-202ENST00000348749 SMC2O95347 1197 aa11.95□□□□□ -0.5
CHRNA1-202ENST00000348749 ILDR2Q71H61 639 aa11.95□□□□□ -0.5
CHRNA1-202ENST00000348749 ZBTB9Q96C00 473 aa11.95□□□□□ -0.5
CHRNA1-202ENST00000348749 TMX1Q9H3N1 280 aa11.95□□□□□ -0.5
CHRNA1-202ENST00000348749 IFNKQ9P0W0 207 aa11.95□□□□□ -0.5
CHRNA1-202ENST00000348749 JRKLQ9Y4A0 524 aa11.95□□□□□ -0.5
CHRNA1-202ENST00000348749 CCDC151A5D8V7 595 aa11.94□□□□□ -0.5
CHRNA1-202ENST00000348749 SASH1O94885 1247 aa11.94□□□□□ -0.5
CHRNA1-202ENST00000348749 HMGB1P09429 215 aaKnown RBP11.94□□□□□ -0.5
CHRNA1-202ENST00000348749 MAP3K9P80192 1104 aa11.94□□□□□ -0.5
CHRNA1-202ENST00000348749 THEMISQ8N1K5 641 aaPredicted RBP11.94□□□□□ -0.5
CHRNA1-202ENST00000348749 DDX54Q8TDD1 881 aaKnown RBP11.94□□□□□ -0.5
CHRNA1-202ENST00000348749 EAF2Q96CJ1 260 aaPredicted RBP11.94□□□□□ -0.5
CHRNA1-202ENST00000348749 CCDC34Q96HJ3 373 aa11.94□□□□□ -0.5
CHRNA1-202ENST00000348749 FSD1Q9BTV5 496 aa11.94□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms