RNA–Protein interactions for RNA: ENST00000348639.7

CHRNA3-202, Transcript of cholinergic receptor nicotinic alpha 3 subunit, humanhuman

TSL 1 (best) BASIC

Gene CHRNA3, Length 2,030 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA3-202ENST00000348639 OSBP2Q969R2 916 aa24.22■■□□□ 1.47
CHRNA3-202ENST00000348639 LRP5O75197 1615 aa24.22■■□□□ 1.47
CHRNA3-202ENST00000348639 M0R2C6 588 aa24.22■■□□□ 1.47
CHRNA3-202ENST00000348639 LINC00116Q8NCU8 138 aa24.22■■□□□ 1.47
CHRNA3-202ENST00000348639 MROH5Q6ZUA9 1318 aa24.21■■□□□ 1.47
CHRNA3-202ENST00000348639 F13A1P00488 732 aa24.21■■□□□ 1.47
CHRNA3-202ENST00000348639 ZSCAN23Q3MJ62 389 aa24.21■■□□□ 1.47
CHRNA3-202ENST00000348639 ATP6V1DQ9Y5K8 247 aa24.21■■□□□ 1.47
CHRNA3-202ENST00000348639 SPATA31A6Q5VVP1 1343 aa24.2■■□□□ 1.47
CHRNA3-202ENST00000348639 HSP90B1P14625 803 aaKnown RBP24.2■■□□□ 1.46
CHRNA3-202ENST00000348639 MCAMP43121 646 aa24.2■■□□□ 1.46
CHRNA3-202ENST00000348639 FAM182BQ5T319 152 aa24.2■■□□□ 1.46
CHRNA3-202ENST00000348639 STOX1Q6ZVD7 989 aa24.2■■□□□ 1.46
CHRNA3-202ENST00000348639 MTMR6Q9Y217 621 aa24.2■■□□□ 1.46
CHRNA3-202ENST00000348639 TMEM87AQ8NBN3 555 aa24.19■■□□□ 1.46
CHRNA3-202ENST00000348639 PANK2Q9BZ23 570 aa24.19■■□□□ 1.46
CHRNA3-202ENST00000348639 ZNF831Q5JPB2 1677 aa24.19■■□□□ 1.46
CHRNA3-202ENST00000348639 PUM3Q15397 648 aaKnown RBP24.18■■□□□ 1.46
CHRNA3-202ENST00000348639 FOXD4L6Q3SYB3 417 aaPredicted RBP24.18■■□□□ 1.46
CHRNA3-202ENST00000348639 MEX3CQ5U5Q3 659 aaKnown RBP24.18■■□□□ 1.46
CHRNA3-202ENST00000348639 PI16Q6UXB8 463 aa24.18■■□□□ 1.46
CHRNA3-202ENST00000348639 FOXD4L3Q6VB84 417 aaPredicted RBP24.18■■□□□ 1.46
CHRNA3-202ENST00000348639 Q6ZUG5 572 aa24.18■■□□□ 1.46
CHRNA3-202ENST00000348639 APPBP2Q92624 585 aa24.18■■□□□ 1.46
CHRNA3-202ENST00000348639 ZNF652Q9Y2D9 606 aa24.18■■□□□ 1.46
CHRNA3-202ENST00000348639 NTSR2O95665 410 aa24.18■■□□□ 1.46
CHRNA3-202ENST00000348639 WASHC4Q2M389 1173 aa24.18■■□□□ 1.46
CHRNA3-202ENST00000348639 DHX32Q7L7V1 743 aaKnown RBP24.18■■□□□ 1.46
CHRNA3-202ENST00000348639 LPIN2Q92539 896 aa24.18■■□□□ 1.46
CHRNA3-202ENST00000348639 COL5A3P25940 1745 aaPredicted RBP24.18■■□□□ 1.46
CHRNA3-202ENST00000348639 FGFR2P21802 821 aa24.17■■□□□ 1.46
CHRNA3-202ENST00000348639 DDX24Q9GZR7 859 aaKnown RBP eCLIP24.17■■□□□ 1.46
CHRNA3-202ENST00000348639 NSFL1CQ9UNZ2 370 aaKnown RBP24.17■■□□□ 1.46
CHRNA3-202ENST00000348639 PDCP20941 246 aa24.17■■□□□ 1.46
CHRNA3-202ENST00000348639 TTF1Q15361 905 aaPredicted RBP24.17■■□□□ 1.46
CHRNA3-202ENST00000348639 USP48Q86UV5 1035 aa24.17■■□□□ 1.46
CHRNA3-202ENST00000348639 HELBQ8NG08 1087 aaPredicted RBP24.17■■□□□ 1.46
CHRNA3-202ENST00000348639 AKAP11Q9UKA4 1901 aa24.16■■□□□ 1.46
CHRNA3-202ENST00000348639 RTL9Q8NET4 1388 aa24.16■■□□□ 1.46
CHRNA3-202ENST00000348639 ARID4AP29374 1257 aaPredicted RBP24.16■■□□□ 1.46
CHRNA3-202ENST00000348639 CCDC152Q4G0S7 254 aa24.16■■□□□ 1.46
CHRNA3-202ENST00000348639 CLEC4GQ6UXB4 293 aa24.16■■□□□ 1.46
CHRNA3-202ENST00000348639 MPHOSPH8Q99549 860 aa24.16■■□□□ 1.46
CHRNA3-202ENST00000348639 SEC31BQ9NQW1 1179 aa24.16■■□□□ 1.46
CHRNA3-202ENST00000348639 RBM27Q9P2N5 1060 aaKnown RBP24.16■■□□□ 1.46
CHRNA3-202ENST00000348639 CTNNA3Q9UI47 895 aa24.16■■□□□ 1.46
CHRNA3-202ENST00000348639 E7EWF7 191 aa24.15■■□□□ 1.46
CHRNA3-202ENST00000348639 UQCRFS1P1P0C7P4 283 aa24.15■■□□□ 1.46
CHRNA3-202ENST00000348639 LARP1BQ659C4 914 aaKnown RBP24.15■■□□□ 1.46
CHRNA3-202ENST00000348639 CCDC102BQ68D86 513 aa24.15■■□□□ 1.46
CHRNA3-202ENST00000348639 ZSCAN25Q6NSZ9 544 aa24.15■■□□□ 1.46
CHRNA3-202ENST00000348639 GTF3C6Q969F1 213 aa24.15■■□□□ 1.46
CHRNA3-202ENST00000348639 TMEM63CQ9P1W3 806 aa24.15■■□□□ 1.46
CHRNA3-202ENST00000348639 EXOSC10Q01780 885 aaKnown RBP24.15■■□□□ 1.46
CHRNA3-202ENST00000348639 SMIM5Q71RC9 77 aa24.15■■□□□ 1.46
CHRNA3-202ENST00000348639 GDPD2Q9HCC8 539 aa24.15■■□□□ 1.46
CHRNA3-202ENST00000348639 STK3Q13188 491 aa24.14■■□□□ 1.45
CHRNA3-202ENST00000348639 PUS7LQ9H0K6 701 aaKnown RBP24.14■■□□□ 1.45
CHRNA3-202ENST00000348639 DDX60Q8IY21 1712 aaKnown RBP24.14■■□□□ 1.45
CHRNA3-202ENST00000348639 FOXP2O15409 715 aa24.13■■□□□ 1.45
CHRNA3-202ENST00000348639 DTNBO60941 627 aa24.13■■□□□ 1.45
CHRNA3-202ENST00000348639 PHKA1P46020 1223 aa24.13■■□□□ 1.45
CHRNA3-202ENST00000348639 AGXT2Q9BYV1 514 aa24.13■■□□□ 1.45
CHRNA3-202ENST00000348639 CNPY2Q9Y2B0 182 aa24.13■■□□□ 1.45
CHRNA3-202ENST00000348639 VPS37CA5D8V6 355 aaPredicted RBP24.13■■□□□ 1.45
CHRNA3-202ENST00000348639 BRF1Q92994 677 aa24.13■■□□□ 1.45
CHRNA3-202ENST00000348639 MYH7P12883 1935 aa24.13■■□□□ 1.45
CHRNA3-202ENST00000348639 LAMA4Q16363 1823 aa24.12■■□□□ 1.45
CHRNA3-202ENST00000348639 A0A0G2JLW4 131 aa24.12■■□□□ 1.45
CHRNA3-202ENST00000348639 SLC5A1P13866 664 aa24.12■■□□□ 1.45
CHRNA3-202ENST00000348639 ADD2P35612 726 aa24.12■■□□□ 1.45
CHRNA3-202ENST00000348639 FGD1P98174 961 aa24.12■■□□□ 1.45
CHRNA3-202ENST00000348639 ARAP2Q8WZ64 1704 aa24.12■■□□□ 1.45
CHRNA3-202ENST00000348639 BCORQ6W2J9 1755 aa24.12■■□□□ 1.45
CHRNA3-202ENST00000348639 TCHHQ07283 1943 aa24.12■■□□□ 1.45
CHRNA3-202ENST00000348639 LAMB2P55268 1798 aa24.12■■□□□ 1.45
CHRNA3-202ENST00000348639 TTLL5Q6EMB2 1281 aa24.11■■□□□ 1.45
CHRNA3-202ENST00000348639 BICDL1Q6ZP65 573 aa24.11■■□□□ 1.45
CHRNA3-202ENST00000348639 CNTNAP4Q9C0A0 1308 aa24.11■■□□□ 1.45
CHRNA3-202ENST00000348639 RGL2O15211 777 aa24.11■■□□□ 1.45
CHRNA3-202ENST00000348639 GADD45BO75293 160 aaPredicted RBP24.11■■□□□ 1.45
CHRNA3-202ENST00000348639 GJD4Q96KN9 370 aaPredicted RBP24.11■■□□□ 1.45
CHRNA3-202ENST00000348639 LRRC2Q9BYS8 371 aa24.11■■□□□ 1.45
CHRNA3-202ENST00000348639 GPAA1O43292 621 aa24.1■■□□□ 1.45
CHRNA3-202ENST00000348639 FGAP02671 866 aa24.1■■□□□ 1.45
CHRNA3-202ENST00000348639 IGHMBP2P38935 993 aaKnown RBP24.1■■□□□ 1.45
CHRNA3-202ENST00000348639 UBE3CQ15386 1083 aa24.1■■□□□ 1.45
CHRNA3-202ENST00000348639 IMMTQ16891 758 aaKnown RBP24.1■■□□□ 1.45
CHRNA3-202ENST00000348639 SLC9C2Q5TAH2 1124 aa24.1■■□□□ 1.45
CHRNA3-202ENST00000348639 SYAP1Q96A49 352 aaPredicted RBP24.1■■□□□ 1.45
CHRNA3-202ENST00000348639 PIH1D3Q9NQM4 214 aaKnown RBP24.1■■□□□ 1.45
CHRNA3-202ENST00000348639 ATRNO75882 1429 aa24.1■■□□□ 1.45
CHRNA3-202ENST00000348639 SNAP23O00161 211 aa24.09■■□□□ 1.45
CHRNA3-202ENST00000348639 PFKFB2O60825 505 aa24.09■■□□□ 1.45
CHRNA3-202ENST00000348639 CSPP1Q1MSJ5 1256 aa24.09■■□□□ 1.45
CHRNA3-202ENST00000348639 FBXL16Q8N461 479 aa24.09■■□□□ 1.45
CHRNA3-202ENST00000348639 BTAF1O14981 1849 aa24.08■■□□□ 1.45
CHRNA3-202ENST00000348639 ERFEQ4G0M1 354 aa24.08■■□□□ 1.45
CHRNA3-202ENST00000348639 LLPHQ9BRT6 129 aaKnown RBP24.08■■□□□ 1.45
CHRNA3-202ENST00000348639 CCNL1Q9UK58 526 aaPredicted RBP24.08■■□□□ 1.45
Retrieved 100 of 20,778 RNA–protein pairs in 7.8 ms