RNA–Protein interactions for RNA: ENST00000348495.10

SSBP4-202, Transcript of single stranded DNA binding protein 4, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene SSBP4, Length 1,721 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-202ENST00000348495 ATP5JP18859 108 aa33.11■■■□□ 2.89
SSBP4-202ENST00000348495 ATP2B4P23634 1241 aa33.11■■■□□ 2.89
SSBP4-202ENST00000348495 ERC2O15083 957 aa33.1■■■□□ 2.89
SSBP4-202ENST00000348495 BMP2KLQ5H9B9 411 aa33.1■■■□□ 2.89
SSBP4-202ENST00000348495 CC2D2BQ6DHV5 1058 aa33.1■■■□□ 2.89
SSBP4-202ENST00000348495 GGA1Q9UJY5 639 aa33.1■■■□□ 2.89
SSBP4-202ENST00000348495 NLGN2Q8NFZ4 835 aa33.09■■■□□ 2.89
SSBP4-202ENST00000348495 TBC1D16Q8TBP0 767 aa33.09■■■□□ 2.89
SSBP4-202ENST00000348495 TMX4Q9H1E5 349 aaPredicted RBP33.09■■■□□ 2.89
SSBP4-202ENST00000348495 KLRK1P26718 216 aa33.08■■■□□ 2.89
SSBP4-202ENST00000348495 CCDC158Q5M9N0 1113 aa33.08■■■□□ 2.89
SSBP4-202ENST00000348495 GORABQ5T7V8 394 aa33.08■■■□□ 2.89
SSBP4-202ENST00000348495 C15orf52Q6ZUT6 534 aaKnown RBP33.08■■■□□ 2.89
SSBP4-202ENST00000348495 MPNDQ8N594 471 aa33.08■■■□□ 2.89
SSBP4-202ENST00000348495 POLLQ9UGP5 575 aa33.08■■■□□ 2.89
SSBP4-202ENST00000348495 CCDC102BQ68D86 513 aa33.08■■■□□ 2.89
SSBP4-202ENST00000348495 ZNF512BQ96KM6 892 aaPredicted RBP33.08■■■□□ 2.89
SSBP4-202ENST00000348495 UFL1O94874 794 aa33.07■■■□□ 2.88
SSBP4-202ENST00000348495 FHDC1Q9C0D6 1143 aaPredicted RBP33.07■■■□□ 2.88
SSBP4-202ENST00000348495 PHKA1P46020 1223 aa33.06■■■□□ 2.88
SSBP4-202ENST00000348495 PPIL4Q8WUA2 492 aaKnown RBP eCLIP33.06■■■□□ 2.88
SSBP4-202ENST00000348495 C21orf2O43822 256 aa33.05■■■□□ 2.88
SSBP4-202ENST00000348495 DALRD3Q5D0E6 543 aaKnown RBP33.05■■■□□ 2.88
SSBP4-202ENST00000348495 DPP8Q6V1X1 898 aaPredicted RBP33.05■■■□□ 2.88
SSBP4-202ENST00000348495 FAM84BQ96KN1 310 aaPredicted RBP33.05■■■□□ 2.88
SSBP4-202ENST00000348495 TXNRD3Q86VQ6 643 aa33.05■■■□□ 2.88
SSBP4-202ENST00000348495 ZNF219Q9P2Y4 722 aaPredicted RBP33.05■■■□□ 2.88
SSBP4-202ENST00000348495 GYG1P46976 350 aa33.04■■■□□ 2.88
SSBP4-202ENST00000348495 BCAMP50895 628 aa33.04■■■□□ 2.88
SSBP4-202ENST00000348495 TTC39AQ5SRH9 613 aa33.04■■■□□ 2.88
SSBP4-202ENST00000348495 FBXO33Q7Z6M2 555 aa33.04■■■□□ 2.88
SSBP4-202ENST00000348495 ARID4AP29374 1257 aaPredicted RBP33.03■■■□□ 2.88
SSBP4-202ENST00000348495 GRIPAP1Q4V328 841 aa33.03■■■□□ 2.88
SSBP4-202ENST00000348495 RTFDC1Q9BY42 306 aaPredicted RBP33.03■■■□□ 2.88
SSBP4-202ENST00000348495 BOLA2Q9H3K6 86 aa33.03■■■□□ 2.88
SSBP4-202ENST00000348495 MED23Q9ULK4 1368 aa33.02■■■□□ 2.88
SSBP4-202ENST00000348495 CAVIN4Q5BKX8 364 aa33.02■■■□□ 2.88
SSBP4-202ENST00000348495 GPR101Q96P66 508 aaPredicted RBP33.02■■■□□ 2.88
SSBP4-202ENST00000348495 HAUS7Q99871 368 aa33.02■■■□□ 2.88
SSBP4-202ENST00000348495 C6orf229H3BNL8 230 aa33.01■■■□□ 2.87
SSBP4-202ENST00000348495 UQCRFS1P1P0C7P4 283 aa33.01■■■□□ 2.87
SSBP4-202ENST00000348495 CCDC93Q567U6 631 aa33.01■■■□□ 2.87
SSBP4-202ENST00000348495 SCARF1Q14162 830 aa33■■■□□ 2.87
SSBP4-202ENST00000348495 AKAP11Q9UKA4 1901 aa33■■■□□ 2.87
SSBP4-202ENST00000348495 ZBTB22O15209 634 aa32.99■■■□□ 2.87
SSBP4-202ENST00000348495 SDSP20132 328 aa32.99■■■□□ 2.87
SSBP4-202ENST00000348495 SOGA3Q5TF21 947 aa32.99■■■□□ 2.87
SSBP4-202ENST00000348495 SYT17Q9BSW7 474 aa32.99■■■□□ 2.87
SSBP4-202ENST00000348495 HIBADHP31937 336 aaKnown RBP32.99■■■□□ 2.87
SSBP4-202ENST00000348495 MCAMP43121 646 aa32.99■■■□□ 2.87
SSBP4-202ENST00000348495 RTKN2Q8IZC4 609 aa32.99■■■□□ 2.87
SSBP4-202ENST00000348495 WWC3Q9ULE0 1092 aa32.98■■■□□ 2.87
SSBP4-202ENST00000348495 MAP4K4O95819 1239 aaPredicted RBP32.97■■■□□ 2.87
SSBP4-202ENST00000348495 RASGRF1Q13972 1273 aa32.97■■■□□ 2.87
SSBP4-202ENST00000348495 VPS37DQ86XT2 251 aa32.97■■■□□ 2.87
SSBP4-202ENST00000348495 GNL3LQ9NVN8 582 aaKnown RBP32.97■■■□□ 2.87
SSBP4-202ENST00000348495 NDUFB9Q9Y6M9 179 aa32.96■■■□□ 2.87
SSBP4-202ENST00000348495 ARFGEF1Q9Y6D6 1849 aa32.96■■■□□ 2.87
SSBP4-202ENST00000348495 PSMD1Q99460 953 aa32.95■■■□□ 2.87
SSBP4-202ENST00000348495 BCS1LQ9Y276 419 aa32.95■■■□□ 2.87
SSBP4-202ENST00000348495 PI16Q6UXB8 463 aa32.94■■■□□ 2.86
SSBP4-202ENST00000348495 ZNF804AQ7Z570 1209 aa32.94■■■□□ 2.86
SSBP4-202ENST00000348495 EYA3Q99504 573 aa32.94■■■□□ 2.86
SSBP4-202ENST00000348495 HMG20BQ9P0W2 317 aa32.94■■■□□ 2.86
SSBP4-202ENST00000348495 TRIM6-TRIM34B2RNG4 842 aa32.94■■■□□ 2.86
SSBP4-202ENST00000348495 EVI5LQ96CN4 794 aa32.94■■■□□ 2.86
SSBP4-202ENST00000348495 DNAJC2Q99543 621 aaKnown RBP32.94■■■□□ 2.86
SSBP4-202ENST00000348495 SEMA3EO15041 775 aa32.93■■■□□ 2.86
SSBP4-202ENST00000348495 WASHC4Q2M389 1173 aa32.93■■■□□ 2.86
SSBP4-202ENST00000348495 CNTROBQ8N137 903 aa32.93■■■□□ 2.86
SSBP4-202ENST00000348495 SPATA5Q8NB90 893 aa32.93■■■□□ 2.86
SSBP4-202ENST00000348495 SUPT20HQ8NEM7 779 aa32.93■■■□□ 2.86
SSBP4-202ENST00000348495 EDC3Q96F86 508 aaKnown RBP32.93■■■□□ 2.86
SSBP4-202ENST00000348495 ZC3H12CQ9C0D7 883 aaKnown RBP32.93■■■□□ 2.86
SSBP4-202ENST00000348495 SNRKQ9NRH2 765 aa32.93■■■□□ 2.86
SSBP4-202ENST00000348495 COL1A1P02452 1464 aaPredicted RBP32.92■■■□□ 2.86
SSBP4-202ENST00000348495 FER1L6Q2WGJ9 1857 aa32.92■■■□□ 2.86
SSBP4-202ENST00000348495 PAG1Q9NWQ8 432 aa32.92■■■□□ 2.86
SSBP4-202ENST00000348495 ZAP70P43403 619 aa32.91■■■□□ 2.86
SSBP4-202ENST00000348495 TDRD7Q8NHU6 1098 aaKnown RBP32.91■■■□□ 2.86
SSBP4-202ENST00000348495 RILPL2Q969X0 211 aa32.91■■■□□ 2.86
SSBP4-202ENST00000348495 IL1R1P14778 569 aa32.91■■■□□ 2.86
SSBP4-202ENST00000348495 FKBP4Q02790 459 aaKnown RBP eCLIP32.91■■■□□ 2.86
SSBP4-202ENST00000348495 CD209Q9NNX6 404 aa32.91■■■□□ 2.86
SSBP4-202ENST00000348495 IQSEC3Q9UPP2 1182 aaPredicted RBP32.91■■■□□ 2.86
SSBP4-202ENST00000348495 PDS5AQ29RF7 1337 aaKnown RBP32.9■■■□□ 2.86
SSBP4-202ENST00000348495 RIMBP2O15034 1052 aa32.9■■■□□ 2.86
SSBP4-202ENST00000348495 PELP1Q8IZL8 1130 aaKnown RBP32.9■■■□□ 2.86
SSBP4-202ENST00000348495 AK9Q5TCS8 1911 aa32.9■■■□□ 2.86
SSBP4-202ENST00000348495 GOLIM4O00461 696 aa32.89■■■□□ 2.86
SSBP4-202ENST00000348495 DENND2AQ9ULE3 1009 aa32.89■■■□□ 2.86
SSBP4-202ENST00000348495 CYP2E1P05181 493 aaPredicted RBP32.88■■■□□ 2.85
SSBP4-202ENST00000348495 COA1Q9GZY4 146 aa32.88■■■□□ 2.85
SSBP4-202ENST00000348495 ANTXR1Q9H6X2 564 aa32.88■■■□□ 2.85
SSBP4-202ENST00000348495 KIAA2012Q0VF49 1180 aa32.88■■■□□ 2.85
SSBP4-202ENST00000348495 C8orf34Q49A92 452 aa32.88■■■□□ 2.85
SSBP4-202ENST00000348495 MYH13Q9UKX3 1938 aa32.87■■■□□ 2.85
SSBP4-202ENST00000348495 KBTBD3Q8NAB2 608 aa32.86■■■□□ 2.85
SSBP4-202ENST00000348495 GOLGB1Q14789 3259 aaKnown RBP32.86■■■□□ 2.85
SSBP4-202ENST00000348495 VPS33BQ9H267 617 aa32.85■■■□□ 2.85
Retrieved 100 of 20,778 RNA–protein pairs in 607.6 ms