RNA–Protein interactions for RNA: ENST00000348259.9

MRPL55-204, Transcript of mitochondrial ribosomal protein L55, humanhuman

APPRIS P1 TSL 2 BASIC

Gene MRPL55, Length 661 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-204ENST00000348259 HYPKQ9NX55 129 aa12.44□□□□□ -0.42
MRPL55-204ENST00000348259 WTIPA6NIX2 430 aaPredicted RBP12.43□□□□□ -0.42
MRPL55-204ENST00000348259 RTL5Q5HYW3 569 aaPredicted RBP12.43□□□□□ -0.42
MRPL55-204ENST00000348259 GGA1Q9UJY5 639 aa12.43□□□□□ -0.42
MRPL55-204ENST00000348259 MED23Q9ULK4 1368 aa12.43□□□□□ -0.42
MRPL55-204ENST00000348259 XDHP47989 1333 aa12.42□□□□□ -0.42
MRPL55-204ENST00000348259 GPR25O00155 361 aa12.42□□□□□ -0.42
MRPL55-204ENST00000348259 PCCAP05165 728 aaPredicted RBP12.42□□□□□ -0.42
MRPL55-204ENST00000348259 USP17L8P0C7I0 530 aa12.42□□□□□ -0.42
MRPL55-204ENST00000348259 NBPF9Q3BBW0 867 aa12.42□□□□□ -0.42
MRPL55-204ENST00000348259 DACT2Q5SW24 774 aa12.42□□□□□ -0.42
MRPL55-204ENST00000348259 PODNQ7Z5L7 613 aa12.42□□□□□ -0.42
MRPL55-204ENST00000348259 ZBED3Q96IU2 234 aaPredicted RBP12.42□□□□□ -0.42
MRPL55-204ENST00000348259 R3HDMLQ9H3Y0 253 aa12.42□□□□□ -0.42
MRPL55-204ENST00000348259 IL16Q14005 1332 aa12.41□□□□□ -0.42
MRPL55-204ENST00000348259 SSC5DA1L4H1 1573 aa12.41□□□□□ -0.42
MRPL55-204ENST00000348259 USP17L3A6NCW0 530 aa12.41□□□□□ -0.42
MRPL55-204ENST00000348259 USP17L4A6NCW7 530 aa12.41□□□□□ -0.42
MRPL55-204ENST00000348259 UBE2Q2LH0YL09 131 aa12.41□□□□□ -0.42
MRPL55-204ENST00000348259 PDE8AO60658 829 aa12.41□□□□□ -0.42
MRPL55-204ENST00000348259 TBC1D8O95759 1140 aa12.41□□□□□ -0.42
MRPL55-204ENST00000348259 FBXO46Q6PJ61 603 aaPredicted RBP12.41□□□□□ -0.42
MRPL55-204ENST00000348259 USP17L1Q7RTZ2 530 aa12.41□□□□□ -0.42
MRPL55-204ENST00000348259 CCDC191Q8NCU4 936 aa12.41□□□□□ -0.42
MRPL55-204ENST00000348259 PHAXQ9H814 394 aaKnown RBP12.41□□□□□ -0.42
MRPL55-204ENST00000348259 RCAN3Q9UKA8 241 aa12.41□□□□□ -0.42
MRPL55-204ENST00000348259 SCAF8Q9UPN6 1271 aaKnown RBP12.41□□□□□ -0.42
MRPL55-204ENST00000348259 KIAA0100Q14667 2235 aaKnown RBP12.41□□□□□ -0.42
MRPL55-204ENST00000348259 WNT10BO00744 389 aa12.4□□□□□ -0.42
MRPL55-204ENST00000348259 CCDC152Q4G0S7 254 aa12.4□□□□□ -0.42
MRPL55-204ENST00000348259 LDLRAD1Q5T700 205 aa12.4□□□□□ -0.42
MRPL55-204ENST00000348259 PRAMEF18Q5VWM3 479 aa12.4□□□□□ -0.42
MRPL55-204ENST00000348259 MBIPQ9NS73 344 aa12.4□□□□□ -0.42
MRPL55-204ENST00000348259 ANKIB1Q9P2G1 1089 aa12.4□□□□□ -0.42
MRPL55-204ENST00000348259 ATP2B4P23634 1241 aa12.39□□□□□ -0.43
MRPL55-204ENST00000348259 MXD3Q9BW11 206 aa12.39□□□□□ -0.43
MRPL55-204ENST00000348259 SZT2Q5T011 3432 aa12.39□□□□□ -0.43
MRPL55-204ENST00000348259 OTOFQ9HC10 1997 aa12.39□□□□□ -0.43
MRPL55-204ENST00000348259 COL1A1P02452 1464 aaPredicted RBP12.39□□□□□ -0.43
MRPL55-204ENST00000348259 IRS2Q9Y4H2 1338 aa12.38□□□□□ -0.43
MRPL55-204ENST00000348259 PTPN12Q05209 780 aaKnown RBP12.38□□□□□ -0.43
MRPL55-204ENST00000348259 MYD88Q99836 296 aa12.38□□□□□ -0.43
MRPL55-204ENST00000348259 METTL22Q9BUU2 404 aaPredicted RBP12.38□□□□□ -0.43
MRPL55-204ENST00000348259 MINPP1Q9UNW1 487 aa12.38□□□□□ -0.43
MRPL55-204ENST00000348259 IGKV5-2P06315 115 aa12.37□□□□□ -0.43
MRPL55-204ENST00000348259 HSP90B1P14625 803 aaKnown RBP12.37□□□□□ -0.43
MRPL55-204ENST00000348259 MMP14P50281 582 aa12.37□□□□□ -0.43
MRPL55-204ENST00000348259 NEUROD2Q15784 382 aa12.37□□□□□ -0.43
MRPL55-204ENST00000348259 MAP3K11Q16584 847 aa12.37□□□□□ -0.43
MRPL55-204ENST00000348259 STRIP1Q5VSL9 837 aa12.37□□□□□ -0.43
MRPL55-204ENST00000348259 SPRYD7Q5W111 196 aa12.37□□□□□ -0.43
MRPL55-204ENST00000348259 RIC3Q7Z5B4 369 aa12.37□□□□□ -0.43
MRPL55-204ENST00000348259 TXNRD3Q86VQ6 643 aa12.37□□□□□ -0.43
MRPL55-204ENST00000348259 TTLL11Q8NHH1 800 aa12.37□□□□□ -0.43
MRPL55-204ENST00000348259 JARID2Q92833 1246 aaPredicted RBP12.37□□□□□ -0.43
MRPL55-204ENST00000348259 MYH16Q9H6N6 1097 aa12.37□□□□□ -0.43
MRPL55-204ENST00000348259 SPINK5Q9NQ38 1064 aaPredicted RBP12.37□□□□□ -0.43
MRPL55-204ENST00000348259 BSDC1Q9NW68 430 aaPredicted RBP12.37□□□□□ -0.43
MRPL55-204ENST00000348259 CWC25Q9NXE8 425 aaPredicted RBP12.37□□□□□ -0.43
MRPL55-204ENST00000348259 MYO3BQ8WXR4 1341 aa12.37□□□□□ -0.43
MRPL55-204ENST00000348259 FKTNO75072 461 aa12.36□□□□□ -0.43
MRPL55-204ENST00000348259 CT47B1P0C2W7 299 aaPredicted RBP12.36□□□□□ -0.43
MRPL55-204ENST00000348259 CTSWP56202 376 aa12.36□□□□□ -0.43
MRPL55-204ENST00000348259 CALD1Q05682 793 aaKnown RBP12.36□□□□□ -0.43
MRPL55-204ENST00000348259 ANKRD18AQ8IVF6 992 aa12.36□□□□□ -0.43
MRPL55-204ENST00000348259 HDAC9Q9UKV0 1011 aa12.36□□□□□ -0.43
MRPL55-204ENST00000348259 LAS1LQ9Y4W2 734 aaKnown RBP12.36□□□□□ -0.43
MRPL55-204ENST00000348259 CCT4P50991 539 aaKnown RBP12.35□□□□□ -0.43
MRPL55-204ENST00000348259 RRP1P56182 461 aaKnown RBP12.35□□□□□ -0.43
MRPL55-204ENST00000348259 SREBF2Q12772 1141 aa12.35□□□□□ -0.43
MRPL55-204ENST00000348259 CCDC85AQ96PX6 553 aaPredicted RBP12.35□□□□□ -0.43
MRPL55-204ENST00000348259 COA1Q9GZY4 146 aa12.35□□□□□ -0.43
MRPL55-204ENST00000348259 GREM2Q9H772 168 aa12.35□□□□□ -0.43
MRPL55-204ENST00000348259 CEP290O15078 2479 aa12.35□□□□□ -0.43
MRPL55-204ENST00000348259 RANBP2P49792 3224 aaKnown RBP12.35□□□□□ -0.43
MRPL55-204ENST00000348259 POTEFA5A3E0 1075 aa12.34□□□□□ -0.43
MRPL55-204ENST00000348259 G3V3G9 751 aa12.34□□□□□ -0.43
MRPL55-204ENST00000348259 SASH1O94885 1247 aa12.34□□□□□ -0.43
MRPL55-204ENST00000348259 KLRK1P26718 216 aa12.34□□□□□ -0.43
MRPL55-204ENST00000348259 CAP1Q01518 475 aa12.34□□□□□ -0.43
MRPL55-204ENST00000348259 DCAF8Q5TAQ9 597 aa12.34□□□□□ -0.43
MRPL55-204ENST00000348259 OTOP1Q7RTM1 612 aa12.34□□□□□ -0.43
MRPL55-204ENST00000348259 C8orf58Q8NAV2 365 aa12.34□□□□□ -0.43
MRPL55-204ENST00000348259 CDC5LQ99459 802 aaKnown RBP12.34□□□□□ -0.43
MRPL55-204ENST00000348259 IFT57Q9NWB7 429 aa12.34□□□□□ -0.43
MRPL55-204ENST00000348259 ARAP2Q8WZ64 1704 aa12.34□□□□□ -0.43
MRPL55-204ENST00000348259 CACNA1FO60840 1977 aa12.33□□□□□ -0.44
MRPL55-204ENST00000348259 IGF2BP3O00425 579 aaKnown RBP eCLIP12.33□□□□□ -0.44
MRPL55-204ENST00000348259 CASP7P55210 303 aa12.33□□□□□ -0.44
MRPL55-204ENST00000348259 HABP4Q5JVS0 413 aaKnown RBP12.33□□□□□ -0.44
MRPL55-204ENST00000348259 APOBEC3FQ8IUX4 373 aaKnown RBP12.33□□□□□ -0.44
MRPL55-204ENST00000348259 MTMR14Q8NCE2 650 aa12.33□□□□□ -0.44
MRPL55-204ENST00000348259 GCC1Q96CN9 775 aa12.33□□□□□ -0.44
MRPL55-204ENST00000348259 FZD1Q9UP38 647 aa12.33□□□□□ -0.44
MRPL55-204ENST00000348259 LEMD3Q9Y2U8 911 aa12.33□□□□□ -0.44
MRPL55-204ENST00000348259 MANSC4A6NHS7 340 aaPredicted RBP12.32□□□□□ -0.44
MRPL55-204ENST00000348259 UNCXA6NJT0 531 aa12.32□□□□□ -0.44
MRPL55-204ENST00000348259 H7C1W4 665 aa12.32□□□□□ -0.44
MRPL55-204ENST00000348259 ALDH1A1P00352 501 aa12.32□□□□□ -0.44
MRPL55-204ENST00000348259 ZBTB48P10074 688 aaPredicted RBP12.32□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 140 ms