RNA–Protein interactions for RNA: ENST00000347471.8

SMARCC2-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SMARCC2, Length 3,839 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC2-202ENST00000347471 PUM3Q15397 648 aaKnown RBP20.4■□□□□ 0.86
SMARCC2-202ENST00000347471 LRRFIP1Q32MZ4 808 aaKnown RBP20.4■□□□□ 0.86
SMARCC2-202ENST00000347471 LARP1BQ659C4 914 aaKnown RBP20.4■□□□□ 0.86
SMARCC2-202ENST00000347471 AK7Q96M32 723 aa20.4■□□□□ 0.86
SMARCC2-202ENST00000347471 GLI3P10071 1580 aa20.4■□□□□ 0.86
SMARCC2-202ENST00000347471 LRP2BPQ9P2M1 347 aa20.4■□□□□ 0.86
SMARCC2-202ENST00000347471 ZMYM1Q5SVZ6 1142 aa20.4■□□□□ 0.86
SMARCC2-202ENST00000347471 MED23Q9ULK4 1368 aa20.39■□□□□ 0.86
SMARCC2-202ENST00000347471 STX6O43752 255 aa20.39■□□□□ 0.86
SMARCC2-202ENST00000347471 MIGA1Q8NAN2 632 aa20.39■□□□□ 0.86
SMARCC2-202ENST00000347471 QTRT2Q9H974 415 aaKnown RBP20.39■□□□□ 0.86
SMARCC2-202ENST00000347471 GPAA1O43292 621 aa20.39■□□□□ 0.85
SMARCC2-202ENST00000347471 ANKRD18AQ8IVF6 992 aa20.39■□□□□ 0.85
SMARCC2-202ENST00000347471 PIH1D3Q9NQM4 214 aaKnown RBP20.39■□□□□ 0.85
SMARCC2-202ENST00000347471 WDR33Q9C0J8 1336 aaKnown RBP20.39■□□□□ 0.85
SMARCC2-202ENST00000347471 GYG1P46976 350 aa20.39■□□□□ 0.85
SMARCC2-202ENST00000347471 APOBRQ0VD83 1088 aa20.39■□□□□ 0.85
SMARCC2-202ENST00000347471 PANK2Q9BZ23 570 aa20.39■□□□□ 0.85
SMARCC2-202ENST00000347471 CYP2E1P05181 493 aaPredicted RBP20.38■□□□□ 0.85
SMARCC2-202ENST00000347471 CHRNDQ07001 517 aa20.38■□□□□ 0.85
SMARCC2-202ENST00000347471 FAM196AQ6ZSG2 479 aa20.38■□□□□ 0.85
SMARCC2-202ENST00000347471 AIDAQ96BJ3 306 aa20.38■□□□□ 0.85
SMARCC2-202ENST00000347471 INTS4Q96HW7 963 aaKnown RBP20.38■□□□□ 0.85
SMARCC2-202ENST00000347471 HMG20BQ9P0W2 317 aa20.38■□□□□ 0.85
SMARCC2-202ENST00000347471 WWC3Q9ULE0 1092 aa20.38■□□□□ 0.85
SMARCC2-202ENST00000347471 NTSR2O95665 410 aa20.38■□□□□ 0.85
SMARCC2-202ENST00000347471 KRT32Q14532 448 aa20.38■□□□□ 0.85
SMARCC2-202ENST00000347471 MAGEB6Q8N7X4 407 aa20.38■□□□□ 0.85
SMARCC2-202ENST00000347471 LPIN2Q92539 896 aa20.38■□□□□ 0.85
SMARCC2-202ENST00000347471 CHAF1AQ13111 956 aaPredicted RBP20.38■□□□□ 0.85
SMARCC2-202ENST00000347471 RRP12Q5JTH9 1297 aaKnown RBP20.38■□□□□ 0.85
SMARCC2-202ENST00000347471 STOX1Q6ZVD7 989 aa20.38■□□□□ 0.85
SMARCC2-202ENST00000347471 GPHNQ9NQX3 736 aaPredicted RBP20.38■□□□□ 0.85
SMARCC2-202ENST00000347471 HELLSQ9NRZ9 838 aa20.38■□□□□ 0.85
SMARCC2-202ENST00000347471 JAK2O60674 1132 aa20.37■□□□□ 0.85
SMARCC2-202ENST00000347471 SKOR2Q2VWA4 1001 aaPredicted RBP20.37■□□□□ 0.85
SMARCC2-202ENST00000347471 RALYLQ86SE5 291 aaKnown RBP20.37■□□□□ 0.85
SMARCC2-202ENST00000347471 AMIGO3Q86WK7 504 aa20.37■□□□□ 0.85
SMARCC2-202ENST00000347471 CDC5LQ99459 802 aaKnown RBP20.37■□□□□ 0.85
SMARCC2-202ENST00000347471 FAM184AQ8NB25 1140 aa20.37■□□□□ 0.85
SMARCC2-202ENST00000347471 NCOA5Q9HCD5 579 aaKnown RBP20.37■□□□□ 0.85
SMARCC2-202ENST00000347471 CNPY2Q9Y2B0 182 aa20.37■□□□□ 0.85
SMARCC2-202ENST00000347471 SHANK3Q9BYB0 1731 aa20.37■□□□□ 0.85
SMARCC2-202ENST00000347471 EPB41L2O43491 1005 aaKnown RBP20.37■□□□□ 0.85
SMARCC2-202ENST00000347471 BRD1O95696 1058 aa20.37■□□□□ 0.85
SMARCC2-202ENST00000347471 ZSCAN31Q96LW9 406 aaPredicted RBP20.37■□□□□ 0.85
SMARCC2-202ENST00000347471 RAI14Q9P0K7 980 aa20.37■□□□□ 0.85
SMARCC2-202ENST00000347471 BCL9LQ86UU0 1499 aa20.37■□□□□ 0.85
SMARCC2-202ENST00000347471 ZNF532Q9HCE3 1301 aa20.36■□□□□ 0.85
SMARCC2-202ENST00000347471 TRIM37O94972 964 aa20.36■□□□□ 0.85
SMARCC2-202ENST00000347471 N4BP2Q86UW6 1770 aaPredicted RBP20.36■□□□□ 0.85
SMARCC2-202ENST00000347471 GUCY1B3Q02153 619 aa20.36■□□□□ 0.85
SMARCC2-202ENST00000347471 FNBP4Q8N3X1 1017 aaPredicted RBP20.36■□□□□ 0.85
SMARCC2-202ENST00000347471 CELF1Q92879 486 aaKnown RBP20.36■□□□□ 0.85
SMARCC2-202ENST00000347471 SLIT2O94813 1529 aa20.36■□□□□ 0.85
SMARCC2-202ENST00000347471 CEBPZQ03701 1054 aaKnown RBP20.36■□□□□ 0.85
SMARCC2-202ENST00000347471 IMMTQ16891 758 aaKnown RBP20.36■□□□□ 0.85
SMARCC2-202ENST00000347471 TM6SF1Q9BZW5 370 aa20.36■□□□□ 0.85
SMARCC2-202ENST00000347471 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP20.35■□□□□ 0.85
SMARCC2-202ENST00000347471 RASGRF1Q13972 1273 aa20.35■□□□□ 0.85
SMARCC2-202ENST00000347471 SH2B1Q9NRF2 756 aaPredicted RBP20.35■□□□□ 0.85
SMARCC2-202ENST00000347471 LMBRD1Q9NUN5 540 aa20.35■□□□□ 0.85
SMARCC2-202ENST00000347471 TFCP2L1Q9NZI6 479 aa20.35■□□□□ 0.85
SMARCC2-202ENST00000347471 NSFL1CQ9UNZ2 370 aaKnown RBP20.35■□□□□ 0.85
SMARCC2-202ENST00000347471 H3BQV1 296 aa20.35■□□□□ 0.85
SMARCC2-202ENST00000347471 FGAP02671 866 aa20.35■□□□□ 0.85
SMARCC2-202ENST00000347471 IFFO2Q5TF58 517 aa20.35■□□□□ 0.85
SMARCC2-202ENST00000347471 APPBP2Q92624 585 aa20.35■□□□□ 0.85
SMARCC2-202ENST00000347471 ARHGEF1Q92888 912 aaKnown RBP20.35■□□□□ 0.85
SMARCC2-202ENST00000347471 NLRP3Q96P20 1036 aa20.35■□□□□ 0.85
SMARCC2-202ENST00000347471 ANKRD1Q15327 319 aa20.35■□□□□ 0.85
SMARCC2-202ENST00000347471 SLC4A8Q2Y0W8 1093 aa20.35■□□□□ 0.85
SMARCC2-202ENST00000347471 SPATA5Q8NB90 893 aa20.35■□□□□ 0.85
SMARCC2-202ENST00000347471 EP400Q96L91 3159 aa20.35■□□□□ 0.85
SMARCC2-202ENST00000347471 E7EWF7 191 aa20.34■□□□□ 0.85
SMARCC2-202ENST00000347471 TOB2Q14106 344 aaPredicted RBP20.34■□□□□ 0.85
SMARCC2-202ENST00000347471 LAMB4A4D0S4 1761 aa20.34■□□□□ 0.85
SMARCC2-202ENST00000347471 FBXO3Q9UK99 471 aa20.34■□□□□ 0.85
SMARCC2-202ENST00000347471 ITGB4P16144 1822 aa20.34■□□□□ 0.85
SMARCC2-202ENST00000347471 ZNF213O14771 459 aa20.34■□□□□ 0.85
SMARCC2-202ENST00000347471 L1TD1Q5T7N2 865 aaKnown RBP20.34■□□□□ 0.85
SMARCC2-202ENST00000347471 MROH5Q6ZUA9 1318 aa20.34■□□□□ 0.85
SMARCC2-202ENST00000347471 TRAPPC3LQ5T215 181 aa20.33■□□□□ 0.85
SMARCC2-202ENST00000347471 ARMT1Q9H993 441 aa20.33■□□□□ 0.85
SMARCC2-202ENST00000347471 ZSCAN22P10073 491 aaPredicted RBP20.33■□□□□ 0.85
SMARCC2-202ENST00000347471 GADD45BO75293 160 aaPredicted RBP20.33■□□□□ 0.84
SMARCC2-202ENST00000347471 DNM1Q05193 864 aaKnown RBP20.33■□□□□ 0.84
SMARCC2-202ENST00000347471 TRDNQ13061 729 aa20.33■□□□□ 0.84
SMARCC2-202ENST00000347471 INCENPQ9NQS7 918 aa20.33■□□□□ 0.84
SMARCC2-202ENST00000347471 TFIP11Q9UBB9 837 aaKnown RBP20.33■□□□□ 0.84
SMARCC2-202ENST00000347471 DOT1LQ8TEK3 1739 aa20.32■□□□□ 0.84
SMARCC2-202ENST00000347471 PDE6AP16499 860 aa20.32■□□□□ 0.84
SMARCC2-202ENST00000347471 RXRAP19793 462 aa20.32■□□□□ 0.84
SMARCC2-202ENST00000347471 MAP3K12Q12852 859 aa20.32■□□□□ 0.84
SMARCC2-202ENST00000347471 CCDC144CPQ8IYA2 1237 aa20.32■□□□□ 0.84
SMARCC2-202ENST00000347471 RNF214Q8ND24 703 aa20.32■□□□□ 0.84
SMARCC2-202ENST00000347471 MBD4O95243 580 aa20.32■□□□□ 0.84
SMARCC2-202ENST00000347471 GAS2L3Q86XJ1 694 aa20.32■□□□□ 0.84
SMARCC2-202ENST00000347471 TRPC5Q9UL62 973 aaPredicted RBP20.32■□□□□ 0.84
SMARCC2-202ENST00000347471 DENND2AQ9ULE3 1009 aa20.32■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms