RNA–Protein interactions for RNA: ENST00000346569.6

ECM1-201, Transcript of extracellular matrix protein 1, humanhuman

TSL 1 (best) BASIC

Gene ECM1, Length 1,444 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECM1-201ENST00000346569 RFX7Q2KHR2 1363 aa13.29□□□□□ -0.28
ECM1-201ENST00000346569 ZBTB22O15209 634 aa13.29□□□□□ -0.28
ECM1-201ENST00000346569 BCAMP50895 628 aa13.29□□□□□ -0.28
ECM1-201ENST00000346569 NMIQ13287 307 aaPredicted RBP13.29□□□□□ -0.28
ECM1-201ENST00000346569 IL17RAQ96F46 866 aa13.29□□□□□ -0.28
ECM1-201ENST00000346569 FAM227BQ96M60 508 aa13.29□□□□□ -0.28
ECM1-201ENST00000346569 LSG1Q9H089 658 aaKnown RBP13.29□□□□□ -0.28
ECM1-201ENST00000346569 CYP2E1P05181 493 aaPredicted RBP13.28□□□□□ -0.28
ECM1-201ENST00000346569 MSL1Q68DK7 614 aa13.28□□□□□ -0.28
ECM1-201ENST00000346569 FBXO33Q7Z6M2 555 aa13.28□□□□□ -0.28
ECM1-201ENST00000346569 RPGRQ92834 1020 aaKnown RBP13.28□□□□□ -0.28
ECM1-201ENST00000346569 FAM84BQ96KN1 310 aaPredicted RBP13.28□□□□□ -0.28
ECM1-201ENST00000346569 HMG20BQ9P0W2 317 aa13.28□□□□□ -0.28
ECM1-201ENST00000346569 A0A0D9SFI3 127 aa13.27□□□□□ -0.29
ECM1-201ENST00000346569 CHGBP05060 677 aa13.27□□□□□ -0.29
ECM1-201ENST00000346569 SRGNP10124 158 aa13.27□□□□□ -0.29
ECM1-201ENST00000346569 FKBP4Q02790 459 aaKnown RBP eCLIP13.27□□□□□ -0.29
ECM1-201ENST00000346569 PI16Q6UXB8 463 aa13.27□□□□□ -0.29
ECM1-201ENST00000346569 SLC16A10Q8TF71 515 aa13.27□□□□□ -0.29
ECM1-201ENST00000346569 PDGFDQ9GZP0 370 aaPredicted RBP13.27□□□□□ -0.29
ECM1-201ENST00000346569 ANO2Q9NQ90 1003 aa13.27□□□□□ -0.29
ECM1-201ENST00000346569 AK9Q5TCS8 1911 aa13.27□□□□□ -0.29
ECM1-201ENST00000346569 ZNF804BA4D1E1 1349 aa13.27□□□□□ -0.29
ECM1-201ENST00000346569 RAD50Q92878 1312 aa13.27□□□□□ -0.29
ECM1-201ENST00000346569 IRS2Q9Y4H2 1338 aa13.27□□□□□ -0.29
ECM1-201ENST00000346569 QSER1Q2KHR3 1735 aa13.27□□□□□ -0.29
ECM1-201ENST00000346569 AKAP11Q9UKA4 1901 aa13.26□□□□□ -0.29
ECM1-201ENST00000346569 PDE6BP35913 854 aa13.26□□□□□ -0.29
ECM1-201ENST00000346569 PTH1RQ03431 593 aa13.26□□□□□ -0.29
ECM1-201ENST00000346569 ZMYM1Q5SVZ6 1142 aa13.26□□□□□ -0.29
ECM1-201ENST00000346569 LEMD3Q9Y2U8 911 aa13.26□□□□□ -0.29
ECM1-201ENST00000346569 GOLGB1Q14789 3259 aaKnown RBP13.26□□□□□ -0.29
ECM1-201ENST00000346569 RNF113AO15541 343 aaKnown RBP13.25□□□□□ -0.29
ECM1-201ENST00000346569 NPR1P16066 1061 aa13.25□□□□□ -0.29
ECM1-201ENST00000346569 RASGRF1Q13972 1273 aa13.25□□□□□ -0.29
ECM1-201ENST00000346569 TTF1Q15361 905 aaPredicted RBP13.25□□□□□ -0.29
ECM1-201ENST00000346569 MCMDC2Q4G0Z9 681 aa13.25□□□□□ -0.29
ECM1-201ENST00000346569 C15orf52Q6ZUT6 534 aaKnown RBP13.25□□□□□ -0.29
ECM1-201ENST00000346569 TMC4Q7Z404 712 aa13.25□□□□□ -0.29
ECM1-201ENST00000346569 MAP4K1Q92918 833 aa13.25□□□□□ -0.29
ECM1-201ENST00000346569 KCNB2Q92953 911 aa13.25□□□□□ -0.29
ECM1-201ENST00000346569 HELLSQ9NRZ9 838 aa13.25□□□□□ -0.29
ECM1-201ENST00000346569 MED23Q9ULK4 1368 aa13.25□□□□□ -0.29
ECM1-201ENST00000346569 SPEF2Q9C093 1822 aa13.25□□□□□ -0.29
ECM1-201ENST00000346569 ZFYP08048 801 aaPredicted RBP13.24□□□□□ -0.29
ECM1-201ENST00000346569 ALDH1B1P30837 517 aa13.24□□□□□ -0.29
ECM1-201ENST00000346569 HSPA4P34932 840 aa13.24□□□□□ -0.29
ECM1-201ENST00000346569 GYG1P46976 350 aa13.24□□□□□ -0.29
ECM1-201ENST00000346569 ANAPC15P60006 121 aa13.24□□□□□ -0.29
ECM1-201ENST00000346569 LRRFIP1Q32MZ4 808 aaKnown RBP13.24□□□□□ -0.29
ECM1-201ENST00000346569 KIAA1211Q6ZU35 1233 aa13.24□□□□□ -0.29
ECM1-201ENST00000346569 ZNF589Q86UQ0 364 aaPredicted RBP13.24□□□□□ -0.29
ECM1-201ENST00000346569 SLC51AQ86UW1 340 aa13.24□□□□□ -0.29
ECM1-201ENST00000346569 SP8Q8IXZ3 490 aa13.24□□□□□ -0.29
ECM1-201ENST00000346569 SPATA5Q8NB90 893 aa13.24□□□□□ -0.29
ECM1-201ENST00000346569 SEC62Q99442 399 aaKnown RBP13.24□□□□□ -0.29
ECM1-201ENST00000346569 PODXL2Q9NZ53 605 aa13.24□□□□□ -0.29
ECM1-201ENST00000346569 ARAP2Q8WZ64 1704 aa13.24□□□□□ -0.29
ECM1-201ENST00000346569 XDHP47989 1333 aa13.23□□□□□ -0.29
ECM1-201ENST00000346569 NECTIN1Q15223 517 aa13.23□□□□□ -0.29
ECM1-201ENST00000346569 SLFNL1Q499Z3 407 aa13.23□□□□□ -0.29
ECM1-201ENST00000346569 CAVIN4Q5BKX8 364 aa13.23□□□□□ -0.29
ECM1-201ENST00000346569 TXNRD3Q86VQ6 643 aa13.23□□□□□ -0.29
ECM1-201ENST00000346569 OSBP2Q969R2 916 aa13.23□□□□□ -0.29
ECM1-201ENST00000346569 SNX21Q969T3 373 aa13.23□□□□□ -0.29
ECM1-201ENST00000346569 MASTLQ96GX5 879 aa13.23□□□□□ -0.29
ECM1-201ENST00000346569 PIH1D3Q9NQM4 214 aaKnown RBP13.23□□□□□ -0.29
ECM1-201ENST00000346569 ANKRD31Q8N7Z5 1873 aa13.23□□□□□ -0.29
ECM1-201ENST00000346569 CCDC171Q6TFL3 1326 aa13.22□□□□□ -0.29
ECM1-201ENST00000346569 KLRK1P26718 216 aa13.22□□□□□ -0.29
ECM1-201ENST00000346569 GPSM2P81274 684 aa13.22□□□□□ -0.29
ECM1-201ENST00000346569 TBC1D2Q9BYX2 928 aa13.22□□□□□ -0.29
ECM1-201ENST00000346569 GNL3LQ9NVN8 582 aaKnown RBP13.22□□□□□ -0.29
ECM1-201ENST00000346569 ANKIB1Q9P2G1 1089 aa13.22□□□□□ -0.29
ECM1-201ENST00000346569 PALD1Q9ULE6 856 aa13.22□□□□□ -0.29
ECM1-201ENST00000346569 A0A1B0GUL6 1792 aa13.22□□□□□ -0.29
ECM1-201ENST00000346569 MCCP23508 829 aa13.22□□□□□ -0.29
ECM1-201ENST00000346569 ATP2B4P23634 1241 aa13.22□□□□□ -0.29
ECM1-201ENST00000346569 HIBADHP31937 336 aaKnown RBP13.22□□□□□ -0.29
ECM1-201ENST00000346569 ADD2P35612 726 aa13.22□□□□□ -0.29
ECM1-201ENST00000346569 KCNJ4P48050 445 aa13.22□□□□□ -0.29
ECM1-201ENST00000346569 RABEP1Q15276 862 aa13.22□□□□□ -0.29
ECM1-201ENST00000346569 ATP6V0A2Q9Y487 856 aa13.22□□□□□ -0.29
ECM1-201ENST00000346569 PDS5AQ29RF7 1337 aaKnown RBP13.21□□□□□ -0.3
ECM1-201ENST00000346569 TCRBV5S4A2TA0A5A2 114 aa13.21□□□□□ -0.3
ECM1-201ENST00000346569 SEMA3EO15041 775 aa13.21□□□□□ -0.3
ECM1-201ENST00000346569 UBE3CQ15386 1083 aa13.21□□□□□ -0.3
ECM1-201ENST00000346569 STYK1Q6J9G0 422 aa13.21□□□□□ -0.3
ECM1-201ENST00000346569 ZSCAN25Q6NSZ9 544 aa13.21□□□□□ -0.3
ECM1-201ENST00000346569 CCDC129Q6ZRS4 1044 aa13.21□□□□□ -0.3
ECM1-201ENST00000346569 RASEFQ8IZ41 740 aa13.21□□□□□ -0.3
ECM1-201ENST00000346569 APPBP2Q92624 585 aa13.21□□□□□ -0.3
ECM1-201ENST00000346569 POLLQ9UGP5 575 aa13.21□□□□□ -0.3
ECM1-201ENST00000346569 DENND2AQ9ULE3 1009 aa13.21□□□□□ -0.3
ECM1-201ENST00000346569 NSFL1CQ9UNZ2 370 aaKnown RBP13.21□□□□□ -0.3
ECM1-201ENST00000346569 H0YIN7 160 aa13.2□□□□□ -0.3
ECM1-201ENST00000346569 PPEF1O14829 653 aaPredicted RBP13.2□□□□□ -0.3
ECM1-201ENST00000346569 SLC4A3P48751 1232 aa13.2□□□□□ -0.3
ECM1-201ENST00000346569 BECN1Q14457 450 aa13.2□□□□□ -0.3
ECM1-201ENST00000346569 SLC9C2Q5TAH2 1124 aa13.2□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms