RNA–Protein interactions for RNA: ENST00000346501.8

TSPAN4-201, Transcript of tetraspanin 4, humanhuman

TSL 3 BASIC

Gene TSPAN4, Length 882 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-201ENST00000346501 OGFOD1Q8N543 542 aa19.7■□□□□ 0.74
TSPAN4-201ENST00000346501 ANKRD44Q8N8A2 993 aa19.7■□□□□ 0.74
TSPAN4-201ENST00000346501 KCNQ5Q9NR82 932 aa19.7■□□□□ 0.74
TSPAN4-201ENST00000346501 TRIM27P14373 513 aa19.69■□□□□ 0.74
TSPAN4-201ENST00000346501 STRIP1Q5VSL9 837 aa19.69■□□□□ 0.74
TSPAN4-201ENST00000346501 C15orf52Q6ZUT6 534 aaKnown RBP19.69■□□□□ 0.74
TSPAN4-201ENST00000346501 CLUAP1Q96AJ1 413 aa19.69■□□□□ 0.74
TSPAN4-201ENST00000346501 MMP14P50281 582 aa19.68■□□□□ 0.74
TSPAN4-201ENST00000346501 RBM26Q5T8P6 1007 aaKnown RBP19.68■□□□□ 0.74
TSPAN4-201ENST00000346501 TTLL5Q6EMB2 1281 aa19.68■□□□□ 0.74
TSPAN4-201ENST00000346501 CREBZFQ9NS37 354 aa19.68■□□□□ 0.74
TSPAN4-201ENST00000346501 WTIPA6NIX2 430 aaPredicted RBP19.67■□□□□ 0.74
TSPAN4-201ENST00000346501 TMEM88BA6NKF7 163 aa19.67■□□□□ 0.74
TSPAN4-201ENST00000346501 USP17L8P0C7I0 530 aa19.67■□□□□ 0.74
TSPAN4-201ENST00000346501 TBC1D10BQ4KMP7 808 aaPredicted RBP19.67■□□□□ 0.74
TSPAN4-201ENST00000346501 TXNRD3Q86VQ6 643 aa19.67■□□□□ 0.74
TSPAN4-201ENST00000346501 VPS37DQ86XT2 251 aa19.67■□□□□ 0.74
TSPAN4-201ENST00000346501 PUS3Q9BZE2 481 aaKnown RBP19.67■□□□□ 0.74
TSPAN4-201ENST00000346501 HDAC9Q9UKV0 1011 aa19.67■□□□□ 0.74
TSPAN4-201ENST00000346501 RIPOR2Q9Y4F9 1068 aa19.67■□□□□ 0.74
TSPAN4-201ENST00000346501 LRRFIP2Q9Y608 721 aaKnown RBP19.67■□□□□ 0.74
TSPAN4-201ENST00000346501 ITGBL1O95965 494 aaPredicted RBP19.66■□□□□ 0.74
TSPAN4-201ENST00000346501 MS4A1P11836 297 aa19.66■□□□□ 0.74
TSPAN4-201ENST00000346501 KIF4BQ2VIQ3 1234 aa19.66■□□□□ 0.74
TSPAN4-201ENST00000346501 CAVIN4Q5BKX8 364 aa19.66■□□□□ 0.74
TSPAN4-201ENST00000346501 CDC37L1Q7L3B6 337 aa19.66■□□□□ 0.74
TSPAN4-201ENST00000346501 DCPSQ96C86 337 aaKnown RBP19.66■□□□□ 0.74
TSPAN4-201ENST00000346501 MEIS3Q99687 375 aa19.66■□□□□ 0.74
TSPAN4-201ENST00000346501 CD209Q9NNX6 404 aa19.66■□□□□ 0.74
TSPAN4-201ENST00000346501 FBXO3Q9UK99 471 aa19.66■□□□□ 0.74
TSPAN4-201ENST00000346501 GTF2IP78347 998 aa19.65■□□□□ 0.74
TSPAN4-201ENST00000346501 SAMD7Q7Z3H4 446 aa19.65■□□□□ 0.74
TSPAN4-201ENST00000346501 DZIP1LQ8IYY4 767 aaKnown RBP19.65■□□□□ 0.74
TSPAN4-201ENST00000346501 TRPM4Q8TD43 1214 aa19.65■□□□□ 0.74
TSPAN4-201ENST00000346501 PASKQ96RG2 1323 aa19.65■□□□□ 0.74
TSPAN4-201ENST00000346501 EYA2O00167 538 aa19.64■□□□□ 0.73
TSPAN4-201ENST00000346501 FRAT2O75474 233 aaPredicted RBP19.64■□□□□ 0.73
TSPAN4-201ENST00000346501 PDE8BO95263 885 aa19.64■□□□□ 0.73
TSPAN4-201ENST00000346501 GNAI2P04899 355 aa19.64■□□□□ 0.73
TSPAN4-201ENST00000346501 IFIT1P09914 478 aaKnown RBP19.64■□□□□ 0.73
TSPAN4-201ENST00000346501 KLRK1P26718 216 aa19.64■□□□□ 0.73
TSPAN4-201ENST00000346501 HIBADHP31937 336 aaKnown RBP19.64■□□□□ 0.73
TSPAN4-201ENST00000346501 HTRA3P83110 453 aa19.64■□□□□ 0.73
TSPAN4-201ENST00000346501 LRRC24Q50LG9 513 aa19.64■□□□□ 0.73
TSPAN4-201ENST00000346501 KLRG1Q96E93 195 aa19.64■□□□□ 0.73
TSPAN4-201ENST00000346501 ZNF609O15014 1411 aa19.64■□□□□ 0.73
TSPAN4-201ENST00000346501 ADAMTSL1Q8N6G6 1762 aa19.64■□□□□ 0.73
TSPAN4-201ENST00000346501 SNAP23O00161 211 aa19.63■□□□□ 0.73
TSPAN4-201ENST00000346501 DACT2Q5SW24 774 aa19.63■□□□□ 0.73
TSPAN4-201ENST00000346501 KLHDC4Q8TBB5 520 aa19.63■□□□□ 0.73
TSPAN4-201ENST00000346501 PGAP2Q9UHJ9 254 aa19.63■□□□□ 0.73
TSPAN4-201ENST00000346501 SHTN1A0MZ66 631 aa19.62■□□□□ 0.73
TSPAN4-201ENST00000346501 IL1R1P14778 569 aa19.62■□□□□ 0.73
TSPAN4-201ENST00000346501 HIRAP54198 1017 aaPredicted RBP19.62■□□□□ 0.73
TSPAN4-201ENST00000346501 ZNF280AP59817 542 aaPredicted RBP19.62■□□□□ 0.73
TSPAN4-201ENST00000346501 PUM3Q15397 648 aaKnown RBP19.62■□□□□ 0.73
TSPAN4-201ENST00000346501 ITPRIPQ8IWB1 547 aa19.62■□□□□ 0.73
TSPAN4-201ENST00000346501 TMEM57Q8N5G2 664 aa19.62■□□□□ 0.73
TSPAN4-201ENST00000346501 MYOZ2Q9NPC6 264 aa19.62■□□□□ 0.73
TSPAN4-201ENST00000346501 CEP126Q9P2H0 1117 aa19.62■□□□□ 0.73
TSPAN4-201ENST00000346501 ABT1Q9ULW3 272 aaKnown RBP19.62■□□□□ 0.73
TSPAN4-201ENST00000346501 SCN9AQ15858 1988 aa19.62■□□□□ 0.73
TSPAN4-201ENST00000346501 CEP350Q5VT06 3117 aa19.62■□□□□ 0.73
TSPAN4-201ENST00000346501 SRGAP3O43295 1099 aa19.61■□□□□ 0.73
TSPAN4-201ENST00000346501 CIAO1O76071 339 aa19.61■□□□□ 0.73
TSPAN4-201ENST00000346501 SLC5A1P13866 664 aa19.61■□□□□ 0.73
TSPAN4-201ENST00000346501 PTPN12Q05209 780 aaKnown RBP19.61■□□□□ 0.73
TSPAN4-201ENST00000346501 SULF1Q8IWU6 871 aa19.61■□□□□ 0.73
TSPAN4-201ENST00000346501 GMLQ99445 158 aa19.61■□□□□ 0.73
TSPAN4-201ENST00000346501 SIL1Q9H173 461 aa19.61■□□□□ 0.73
TSPAN4-201ENST00000346501 SASH1O94885 1247 aa19.6■□□□□ 0.73
TSPAN4-201ENST00000346501 IL15P40933 162 aaPredicted RBP19.6■□□□□ 0.73
TSPAN4-201ENST00000346501 KRT26Q7Z3Y9 468 aa19.6■□□□□ 0.73
TSPAN4-201ENST00000346501 DNAJC5GQ8N7S2 189 aa19.6■□□□□ 0.73
TSPAN4-201ENST00000346501 PSME4Q14997 1843 aa19.6■□□□□ 0.73
TSPAN4-201ENST00000346501 GYG1P46976 350 aa19.59■□□□□ 0.73
TSPAN4-201ENST00000346501 RFX5P48382 616 aaPredicted RBP19.59■□□□□ 0.73
TSPAN4-201ENST00000346501 FKBP1AP62942 108 aaKnown RBP19.59■□□□□ 0.73
TSPAN4-201ENST00000346501 KIAA0825Q8IV33 1275 aa19.59■□□□□ 0.73
TSPAN4-201ENST00000346501 GLIS2Q9BZE0 524 aaPredicted RBP19.59■□□□□ 0.73
TSPAN4-201ENST00000346501 ZNF408Q9H9D4 720 aa19.59■□□□□ 0.73
TSPAN4-201ENST00000346501 SCARF1Q14162 830 aa19.58■□□□□ 0.72
TSPAN4-201ENST00000346501 USP48Q86UV5 1035 aa19.58■□□□□ 0.72
TSPAN4-201ENST00000346501 GOLGA6L2Q8N9W4 650 aaPredicted RBP19.58■□□□□ 0.72
TSPAN4-201ENST00000346501 LPIN2Q92539 896 aa19.58■□□□□ 0.72
TSPAN4-201ENST00000346501 FAM84BQ96KN1 310 aaPredicted RBP19.58■□□□□ 0.72
TSPAN4-201ENST00000346501 COPRSQ9NQ92 184 aa19.58■□□□□ 0.72
TSPAN4-201ENST00000346501 GGA3Q9NZ52 723 aa19.58■□□□□ 0.72
TSPAN4-201ENST00000346501 RCAN3Q9UKA8 241 aa19.58■□□□□ 0.72
TSPAN4-201ENST00000346501 TNNQ9UQP3 1299 aa19.58■□□□□ 0.72
TSPAN4-201ENST00000346501 IRS2Q9Y4H2 1338 aa19.57■□□□□ 0.72
TSPAN4-201ENST00000346501 TRAF5O00463 557 aa19.57■□□□□ 0.72
TSPAN4-201ENST00000346501 CELF2O95319 508 aaKnown RBP19.57■□□□□ 0.72
TSPAN4-201ENST00000346501 MTX1Q13505 466 aa19.57■□□□□ 0.72
TSPAN4-201ENST00000346501 VGLL2Q8N8G2 317 aa19.57■□□□□ 0.72
TSPAN4-201ENST00000346501 TDRD7Q8NHU6 1098 aaKnown RBP19.57■□□□□ 0.72
TSPAN4-201ENST00000346501 MXD3Q9BW11 206 aa19.57■□□□□ 0.72
TSPAN4-201ENST00000346501 CHMP4BQ9H444 224 aaKnown RBP19.57■□□□□ 0.72
TSPAN4-201ENST00000346501 GNL3LQ9NVN8 582 aaKnown RBP19.57■□□□□ 0.72
TSPAN4-201ENST00000346501 MKRN1Q9UHC7 482 aaKnown RBP19.57■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms