RNA–Protein interactions for RNA: ENST00000345617.7

HDAC4-201, Transcript of histone deacetylase 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDAC4, Length 8,976 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-201ENST00000345617 RANBP6O60518 1105 aaKnown RBP21.87■■□□□ 1.09
HDAC4-201ENST00000345617 SPTY2D1Q68D10 685 aaPredicted RBP21.87■■□□□ 1.09
HDAC4-201ENST00000345617 TMX1Q9H3N1 280 aa21.86■■□□□ 1.09
HDAC4-201ENST00000345617 SERPINA10Q9UK55 444 aa21.86■■□□□ 1.09
HDAC4-201ENST00000345617 NDUFAB1O14561 156 aa21.86■■□□□ 1.09
HDAC4-201ENST00000345617 DCAF8L1A6NGE4 600 aa21.86■■□□□ 1.09
HDAC4-201ENST00000345617 CCDC144CPQ8IYA2 1237 aa21.86■■□□□ 1.09
HDAC4-201ENST00000345617 KCNH5Q8NCM2 988 aa21.86■■□□□ 1.09
HDAC4-201ENST00000345617 RAB3IPQ96QF0 476 aaPredicted RBP21.86■■□□□ 1.09
HDAC4-201ENST00000345617 GIMAP6Q6P9H5 292 aa21.85■■□□□ 1.09
HDAC4-201ENST00000345617 SEPT14Q6ZU15 432 aa21.85■■□□□ 1.09
HDAC4-201ENST00000345617 NEK11Q8NG66 645 aa21.85■■□□□ 1.09
HDAC4-201ENST00000345617 IMPACTQ9P2X3 320 aa21.85■■□□□ 1.09
HDAC4-201ENST00000345617 PPP1R7Q15435 360 aa21.85■■□□□ 1.09
HDAC4-201ENST00000345617 UTP14AQ9BVJ6 771 aaKnown RBP21.85■■□□□ 1.09
HDAC4-201ENST00000345617 BAG3O95817 575 aa21.85■■□□□ 1.09
HDAC4-201ENST00000345617 NESP48681 1621 aa21.85■■□□□ 1.09
HDAC4-201ENST00000345617 MAP2K2P36507 400 aa21.85■■□□□ 1.09
HDAC4-201ENST00000345617 RPGRIP1Q96KN7 1286 aa21.85■■□□□ 1.09
HDAC4-201ENST00000345617 BOLA2Q9H3K6 86 aa21.85■■□□□ 1.09
HDAC4-201ENST00000345617 NUTM2AQ8IVF1 878 aaPredicted RBP21.85■■□□□ 1.09
HDAC4-201ENST00000345617 CHMP4BP1P59074 171 aa21.84■■□□□ 1.09
HDAC4-201ENST00000345617 VWA3BQ502W6 1294 aa21.84■■□□□ 1.09
HDAC4-201ENST00000345617 TRIM27P14373 513 aa21.84■■□□□ 1.09
HDAC4-201ENST00000345617 CALML3P27482 149 aa21.84■■□□□ 1.09
HDAC4-201ENST00000345617 RAB3GAP1Q15042 981 aa21.84■■□□□ 1.09
HDAC4-201ENST00000345617 MCUR1Q96AQ8 359 aa21.84■■□□□ 1.09
HDAC4-201ENST00000345617 IQCDQ96DY2 449 aa21.84■■□□□ 1.09
HDAC4-201ENST00000345617 PPP2R3AQ06190 1150 aa21.84■■□□□ 1.09
HDAC4-201ENST00000345617 TTF2Q9UNY4 1162 aaKnown RBP21.84■■□□□ 1.09
HDAC4-201ENST00000345617 KDM5AP29375 1690 aaKnown RBP21.84■■□□□ 1.09
HDAC4-201ENST00000345617 IDEP14735 1019 aa21.84■■□□□ 1.09
HDAC4-201ENST00000345617 RRAGBQ5VZM2 374 aa21.84■■□□□ 1.09
HDAC4-201ENST00000345617 TMEM132EQ6IEE7 984 aa21.84■■□□□ 1.09
HDAC4-201ENST00000345617 USP48Q86UV5 1035 aa21.84■■□□□ 1.09
HDAC4-201ENST00000345617 ORC3Q9UBD5 711 aaPredicted RBP21.84■■□□□ 1.09
HDAC4-201ENST00000345617 CCDC186Q7Z3E2 898 aa21.83■■□□□ 1.09
HDAC4-201ENST00000345617 ATP6V0A2Q9Y487 856 aa21.83■■□□□ 1.09
HDAC4-201ENST00000345617 GNAQP50148 359 aa21.83■■□□□ 1.09
HDAC4-201ENST00000345617 TAF7Q15545 349 aaPredicted RBP21.83■■□□□ 1.09
HDAC4-201ENST00000345617 SEL1L2Q5TEA6 688 aa21.83■■□□□ 1.09
HDAC4-201ENST00000345617 USP16Q9Y5T5 823 aa21.83■■□□□ 1.09
HDAC4-201ENST00000345617 UBXN1Q04323 297 aa21.83■■□□□ 1.09
HDAC4-201ENST00000345617 KAT14Q9H8E8 782 aa21.83■■□□□ 1.09
HDAC4-201ENST00000345617 TROQ12816 1431 aaPredicted RBP21.83■■□□□ 1.08
HDAC4-201ENST00000345617 ESCO1Q5FWF5 840 aa21.83■■□□□ 1.08
HDAC4-201ENST00000345617 ARHGAP45Q92619 1136 aa21.83■■□□□ 1.08
HDAC4-201ENST00000345617 EPSTI1Q96J88 318 aa21.83■■□□□ 1.08
HDAC4-201ENST00000345617 AQRO60306 1485 aaKnown RBP eCLIP21.83■■□□□ 1.086e-9■■■■■ 37.6
HDAC4-201ENST00000345617 MTMR3Q13615 1198 aa21.83■■□□□ 1.08
HDAC4-201ENST00000345617 NUTM2GQ5VZR2 741 aa21.83■■□□□ 1.08
HDAC4-201ENST00000345617 PUF60Q9UHX1 559 aaKnown RBP21.83■■□□□ 1.08
HDAC4-201ENST00000345617 RTL9Q8NET4 1388 aa21.83■■□□□ 1.08
HDAC4-201ENST00000345617 TSKSQ9UJT2 592 aa21.82■■□□□ 1.08
HDAC4-201ENST00000345617 THEGQ9P2T0 379 aa21.82■■□□□ 1.08
HDAC4-201ENST00000345617 CCT2P78371 535 aaKnown RBP21.82■■□□□ 1.08
HDAC4-201ENST00000345617 AOPEPQ8N6M6 819 aa21.82■■□□□ 1.08
HDAC4-201ENST00000345617 UBL4BQ8N7F7 174 aa21.82■■□□□ 1.08
HDAC4-201ENST00000345617 INF2Q27J81 1249 aa21.82■■□□□ 1.08
HDAC4-201ENST00000345617 MICU3Q86XE3 530 aa21.82■■□□□ 1.08
HDAC4-201ENST00000345617 RNF10Q8N5U6 811 aaKnown RBP21.82■■□□□ 1.08
HDAC4-201ENST00000345617 DBF4Q9UBU7 674 aaPredicted RBP21.82■■□□□ 1.08
HDAC4-201ENST00000345617 F13A1P00488 732 aa21.82■■□□□ 1.08
HDAC4-201ENST00000345617 SLC8A1P32418 973 aa21.82■■□□□ 1.08
HDAC4-201ENST00000345617 MYCBPQ99417 103 aaPredicted RBP21.82■■□□□ 1.08
HDAC4-201ENST00000345617 TMX3Q96JJ7 454 aa21.82■■□□□ 1.08
HDAC4-201ENST00000345617 CFAP70Q5T0N1 1121 aa21.81■■□□□ 1.08
HDAC4-201ENST00000345617 SUDS3Q9H7L9 328 aaPredicted RBP21.81■■□□□ 1.08
HDAC4-201ENST00000345617 ANKIB1Q9P2G1 1089 aa21.81■■□□□ 1.08
HDAC4-201ENST00000345617 THOC2Q8NI27 1593 aaKnown RBP21.81■■□□□ 1.08
HDAC4-201ENST00000345617 UBLCP1Q8WVY7 318 aaPredicted RBP21.81■■□□□ 1.08
HDAC4-201ENST00000345617 ARL1P40616 181 aaPredicted RBP21.81■■□□□ 1.08
HDAC4-201ENST00000345617 HAUS2Q9NVX0 235 aa21.81■■□□□ 1.08
HDAC4-201ENST00000345617 ELP1O95163 1332 aa21.81■■□□□ 1.08
HDAC4-201ENST00000345617 BICD1Q96G01 975 aa21.81■■□□□ 1.08
HDAC4-201ENST00000345617 BAG1Q99933 345 aaPredicted RBP21.81■■□□□ 1.08
HDAC4-201ENST00000345617 MYRIPQ8NFW9 859 aa21.8■■□□□ 1.08
HDAC4-201ENST00000345617 SLC12A5Q9H2X9 1139 aa21.8■■□□□ 1.08
HDAC4-201ENST00000345617 CNPY2Q9Y2B0 182 aa21.8■■□□□ 1.08
HDAC4-201ENST00000345617 DNAJC8O75937 253 aaPredicted RBP21.8■■□□□ 1.08
HDAC4-201ENST00000345617 GSTO1P78417 241 aa21.8■■□□□ 1.08
HDAC4-201ENST00000345617 CABP1Q9NZU7 370 aa21.8■■□□□ 1.08
HDAC4-201ENST00000345617 IGF1RP08069 1367 aa21.8■■□□□ 1.08
HDAC4-201ENST00000345617 CETN3O15182 167 aa21.8■■□□□ 1.08
HDAC4-201ENST00000345617 VPS52Q8N1B4 723 aa21.8■■□□□ 1.08
HDAC4-201ENST00000345617 I3L4J1 428 aa21.8■■□□□ 1.08
HDAC4-201ENST00000345617 TBC1D31Q96DN5 1066 aa21.8■■□□□ 1.08
HDAC4-201ENST00000345617 GUCA1BQ9UMX6 200 aa21.8■■□□□ 1.08
HDAC4-201ENST00000345617 PPP2R5EQ16537 467 aa21.79■■□□□ 1.08
HDAC4-201ENST00000345617 SMC5Q8IY18 1101 aa21.79■■□□□ 1.08
HDAC4-201ENST00000345617 GOLGA6BA6NDN3 693 aa21.79■■□□□ 1.08
HDAC4-201ENST00000345617 VIMP08670 466 aaKnown RBP21.79■■□□□ 1.08
HDAC4-201ENST00000345617 AKR1B15C9JRZ8 316 aaPredicted RBP21.79■■□□□ 1.08
HDAC4-201ENST00000345617 NAPGQ99747 312 aaPredicted RBP21.79■■□□□ 1.08
HDAC4-201ENST00000345617 Q9H521 79 aa21.79■■□□□ 1.08
HDAC4-201ENST00000345617 TOM1L2Q6ZVM7 507 aa21.79■■□□□ 1.08
HDAC4-201ENST00000345617 SNAPC4Q5SXM2 1469 aa21.78■■□□□ 1.08
HDAC4-201ENST00000345617 IFT81Q8WYA0 676 aa21.78■■□□□ 1.08
HDAC4-201ENST00000345617 GDPD2Q9HCC8 539 aa21.78■■□□□ 1.08
HDAC4-201ENST00000345617 FAM177BA6PVY3 158 aa21.78■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms