RNA–Protein interactions for RNA: ENST00000344824.10

TPM4-202, Transcript of tropomyosin 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene TPM4, Length 1,417 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-202ENST00000344824 ZNF646O15015 1829 aaPredicted RBP17.23■□□□□ 0.35
TPM4-202ENST00000344824 UBTFL1P0CB47 393 aaPredicted RBP17.23■□□□□ 0.35
TPM4-202ENST00000344824 LDHAL6AQ6ZMR3 332 aa17.23■□□□□ 0.35
TPM4-202ENST00000344824 KAZALD1Q96I82 304 aa17.23■□□□□ 0.35
TPM4-202ENST00000344824 USP44Q9H0E7 712 aa17.23■□□□□ 0.35
TPM4-202ENST00000344824 KCNQ5Q9NR82 932 aa17.23■□□□□ 0.35
TPM4-202ENST00000344824 ZBTB12Q9Y330 459 aaPredicted RBP17.23■□□□□ 0.35
TPM4-202ENST00000344824 ZNF804BA4D1E1 1349 aa17.23■□□□□ 0.35
TPM4-202ENST00000344824 NPM3O75607 178 aaKnown RBP17.22■□□□□ 0.35
TPM4-202ENST00000344824 APLP1P51693 650 aa17.22■□□□□ 0.35
TPM4-202ENST00000344824 HTRA3P83110 453 aa17.22■□□□□ 0.35
TPM4-202ENST00000344824 PNMA8AQ86V59 439 aaPredicted RBP17.22■□□□□ 0.35
TPM4-202ENST00000344824 ANKRD44Q8N8A2 993 aa17.22■□□□□ 0.35
TPM4-202ENST00000344824 GPRC5DQ9NZD1 345 aa17.22■□□□□ 0.35
TPM4-202ENST00000344824 LEMD3Q9Y2U8 911 aa17.22■□□□□ 0.35
TPM4-202ENST00000344824 MYH13Q9UKX3 1938 aa17.22■□□□□ 0.35
TPM4-202ENST00000344824 KLRK1P26718 216 aa17.21■□□□□ 0.35
TPM4-202ENST00000344824 TRPM7Q96QT4 1865 aa17.21■□□□□ 0.35
TPM4-202ENST00000344824 SHTN1A0MZ66 631 aa17.21■□□□□ 0.34
TPM4-202ENST00000344824 SNAP23O00161 211 aa17.21■□□□□ 0.34
TPM4-202ENST00000344824 INTS3Q68E01 1043 aaKnown RBP17.21■□□□□ 0.34
TPM4-202ENST00000344824 MICALL2Q8IY33 904 aa17.21■□□□□ 0.34
TPM4-202ENST00000344824 ADARB2Q9NS39 739 aaKnown RBP17.21■□□□□ 0.34
TPM4-202ENST00000344824 POLR2AP24928 1970 aaKnown RBP17.2■□□□□ 0.34
TPM4-202ENST00000344824 RABL6Q3YEC7 729 aaPredicted RBP17.2■□□□□ 0.34
TPM4-202ENST00000344824 MAP1SQ66K74 1059 aaPredicted RBP17.2■□□□□ 0.34
TPM4-202ENST00000344824 TXNRD3Q86VQ6 643 aa17.2■□□□□ 0.34
TPM4-202ENST00000344824 KLHDC4Q8TBB5 520 aa17.2■□□□□ 0.34
TPM4-202ENST00000344824 MEIS3Q99687 375 aa17.2■□□□□ 0.34
TPM4-202ENST00000344824 PUS3Q9BZE2 481 aaKnown RBP17.2■□□□□ 0.34
TPM4-202ENST00000344824 DDX19BQ9UMR2 479 aa17.2■□□□□ 0.34
TPM4-202ENST00000344824 CNOT7Q9UIV1 285 aaKnown RBP17.19■□□□□ 0.34
TPM4-202ENST00000344824 LRRFIP2Q9Y608 721 aaKnown RBP17.19■□□□□ 0.34
TPM4-202ENST00000344824 H7C1D1 291 aa17.18■□□□□ 0.34
TPM4-202ENST00000344824 USP50Q70EL3 339 aaPredicted RBP17.18■□□□□ 0.34
TPM4-202ENST00000344824 TRPM4Q8TD43 1214 aa17.18■□□□□ 0.34
TPM4-202ENST00000344824 TBC1D10BQ4KMP7 808 aaPredicted RBP17.17■□□□□ 0.34
TPM4-202ENST00000344824 METTL24Q5JXM2 366 aa17.17■□□□□ 0.34
TPM4-202ENST00000344824 RBM26Q5T8P6 1007 aaKnown RBP17.17■□□□□ 0.34
TPM4-202ENST00000344824 PODNQ7Z5L7 613 aa17.17■□□□□ 0.34
TPM4-202ENST00000344824 COA1Q9GZY4 146 aa17.17■□□□□ 0.34
TPM4-202ENST00000344824 USP17L3A6NCW0 530 aa17.16■□□□□ 0.34
TPM4-202ENST00000344824 USP17L4A6NCW7 530 aa17.16■□□□□ 0.34
TPM4-202ENST00000344824 RPS12P25398 132 aaKnown RBP17.16■□□□□ 0.34
TPM4-202ENST00000344824 LRRC24Q50LG9 513 aa17.16■□□□□ 0.34
TPM4-202ENST00000344824 USP17L1Q7RTZ2 530 aa17.16■□□□□ 0.34
TPM4-202ENST00000344824 SAMD7Q7Z3H4 446 aa17.16■□□□□ 0.34
TPM4-202ENST00000344824 ZNF804AQ7Z570 1209 aa17.16■□□□□ 0.34
TPM4-202ENST00000344824 SIL1Q9H173 461 aa17.16■□□□□ 0.34
TPM4-202ENST00000344824 ARAP2Q8WZ64 1704 aa17.15■□□□□ 0.34
TPM4-202ENST00000344824 ERICH6BQ5W0A0 696 aa17.15■□□□□ 0.34
TPM4-202ENST00000344824 RSBN1LQ6PCB5 846 aaPredicted RBP17.15■□□□□ 0.34
TPM4-202ENST00000344824 CNTROBQ8N137 903 aa17.15■□□□□ 0.34
TPM4-202ENST00000344824 DPF2Q92785 391 aa17.15■□□□□ 0.34
TPM4-202ENST00000344824 C1orf115Q9H7X2 142 aa17.15■□□□□ 0.34
TPM4-202ENST00000344824 HDAC5Q9UQL6 1122 aa17.15■□□□□ 0.34
TPM4-202ENST00000344824 MROH5Q6ZUA9 1318 aa17.15■□□□□ 0.34
TPM4-202ENST00000344824 ZBTB7BO15156 539 aaPredicted RBP17.14■□□□□ 0.33
TPM4-202ENST00000344824 GNAI3P08754 354 aa17.14■□□□□ 0.33
TPM4-202ENST00000344824 VIL1P09327 827 aaKnown RBP17.14■□□□□ 0.33
TPM4-202ENST00000344824 MXD3Q9BW11 206 aa17.14■□□□□ 0.33
TPM4-202ENST00000344824 KIF4BQ2VIQ3 1234 aa17.13■□□□□ 0.33
TPM4-202ENST00000344824 PPP4R2Q9NY27 417 aa17.13■□□□□ 0.33
TPM4-202ENST00000344824 JAG2Q9Y219 1238 aa17.13■□□□□ 0.33
TPM4-202ENST00000344824 EGFRP00533 1210 aa17.13■□□□□ 0.33
TPM4-202ENST00000344824 GTF2IP78347 998 aa17.13■□□□□ 0.33
TPM4-202ENST00000344824 B4GALNT3Q6L9W6 998 aa17.13■□□□□ 0.33
TPM4-202ENST00000344824 AGBL3Q8NEM8 1001 aa17.13■□□□□ 0.33
TPM4-202ENST00000344824 CHMP4BQ9H444 224 aaKnown RBP17.13■□□□□ 0.33
TPM4-202ENST00000344824 CD209Q9NNX6 404 aa17.13■□□□□ 0.33
TPM4-202ENST00000344824 RIPOR2Q9Y4F9 1068 aa17.13■□□□□ 0.33
TPM4-202ENST00000344824 RFX5P48382 616 aaPredicted RBP17.12■□□□□ 0.33
TPM4-202ENST00000344824 HIRAP54198 1017 aaPredicted RBP17.12■□□□□ 0.33
TPM4-202ENST00000344824 UBE4AQ14139 1066 aa17.12■□□□□ 0.33
TPM4-202ENST00000344824 TTLL5Q6EMB2 1281 aa17.12■□□□□ 0.33
TPM4-202ENST00000344824 ZBTB40Q9NUA8 1239 aa17.12■□□□□ 0.33
TPM4-202ENST00000344824 PA2G4Q9UQ80 394 aaKnown RBP17.12■□□□□ 0.33
TPM4-202ENST00000344824 PASKQ96RG2 1323 aa17.12■□□□□ 0.33
TPM4-202ENST00000344824 ECM29Q5VYK3 1845 aa17.12■□□□□ 0.33
TPM4-202ENST00000344824 MYO3BQ8WXR4 1341 aa17.11■□□□□ 0.33
TPM4-202ENST00000344824 IRS2Q9Y4H2 1338 aa17.11■□□□□ 0.33
TPM4-202ENST00000344824 EYA2O00167 538 aa17.11■□□□□ 0.33
TPM4-202ENST00000344824 TRAF5O00463 557 aa17.11■□□□□ 0.33
TPM4-202ENST00000344824 ITGBL1O95965 494 aaPredicted RBP17.11■□□□□ 0.33
TPM4-202ENST00000344824 GYG1P46976 350 aa17.11■□□□□ 0.33
TPM4-202ENST00000344824 PTPN12Q05209 780 aaKnown RBP17.11■□□□□ 0.33
TPM4-202ENST00000344824 FMR1Q06787 632 aaKnown RBP eCLIP17.11■□□□□ 0.33
TPM4-202ENST00000344824 DACT2Q5SW24 774 aa17.11■□□□□ 0.33
TPM4-202ENST00000344824 STRIP1Q5VSL9 837 aa17.11■□□□□ 0.33
TPM4-202ENST00000344824 VPS37DQ86XT2 251 aa17.11■□□□□ 0.33
TPM4-202ENST00000344824 CCDC136Q96JN2 1154 aa17.11■□□□□ 0.33
TPM4-202ENST00000344824 GLIS2Q9BZE0 524 aaPredicted RBP17.11■□□□□ 0.33
TPM4-202ENST00000344824 ZNF408Q9H9D4 720 aa17.11■□□□□ 0.33
TPM4-202ENST00000344824 ZNF609O15014 1411 aa17.1■□□□□ 0.33
TPM4-202ENST00000344824 SRGAP3O43295 1099 aa17.1■□□□□ 0.33
TPM4-202ENST00000344824 USP17L8P0C7I0 530 aa17.1■□□□□ 0.33
TPM4-202ENST00000344824 KIAA0825Q8IV33 1275 aa17.1■□□□□ 0.33
TPM4-202ENST00000344824 TMEM88BA6NKF7 163 aa17.09■□□□□ 0.33
TPM4-202ENST00000344824 GNAI2P04899 355 aa17.09■□□□□ 0.33
TPM4-202ENST00000344824 C15orf52Q6ZUT6 534 aaKnown RBP17.09■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 59.9 ms