RNA–Protein interactions for RNA: ENST00000344627.10

SGCA-202, Transcript of sarcoglycan alpha, humanhuman

TSL 1 (best) BASIC

Gene SGCA, Length 1,057 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCA-202ENST00000344627 OGFOD1Q8N543 542 aa15.8■□□□□ 0.12
SGCA-202ENST00000344627 TTLL11Q8NHH1 800 aa15.8■□□□□ 0.12
SGCA-202ENST00000344627 ANKRD2Q9GZV1 360 aa15.8■□□□□ 0.12
SGCA-202ENST00000344627 COA1Q9GZY4 146 aa15.8■□□□□ 0.12
SGCA-202ENST00000344627 KCNQ5Q9NR82 932 aa15.8■□□□□ 0.12
SGCA-202ENST00000344627 GGA3Q9NZ52 723 aa15.8■□□□□ 0.12
SGCA-202ENST00000344627 SHTN1A0MZ66 631 aa15.79■□□□□ 0.12
SGCA-202ENST00000344627 H7C1W4 665 aa15.79■□□□□ 0.12
SGCA-202ENST00000344627 IGHMBP2P38935 993 aaKnown RBP15.79■□□□□ 0.12
SGCA-202ENST00000344627 STRIP1Q5VSL9 837 aa15.79■□□□□ 0.12
SGCA-202ENST00000344627 GMLQ99445 158 aa15.79■□□□□ 0.12
SGCA-202ENST00000344627 PLA2G12BQ9BX93 195 aa15.79■□□□□ 0.12
SGCA-202ENST00000344627 MYOZ2Q9NPC6 264 aa15.79■□□□□ 0.12
SGCA-202ENST00000344627 FAM155AB1AL88 458 aaPredicted RBP15.78■□□□□ 0.12
SGCA-202ENST00000344627 F6X3S4 739 aa15.78■□□□□ 0.12
SGCA-202ENST00000344627 SCARF1Q14162 830 aa15.78■□□□□ 0.12
SGCA-202ENST00000344627 LINS1Q8NG48 757 aa15.78■□□□□ 0.12
SGCA-202ENST00000344627 MINPP1Q9UNW1 487 aa15.78■□□□□ 0.12
SGCA-202ENST00000344627 ADM5C9JUS6 153 aa15.77■□□□□ 0.12
SGCA-202ENST00000344627 EGFRP00533 1210 aa15.77■□□□□ 0.12
SGCA-202ENST00000344627 SLC10A3P09131 477 aa15.77■□□□□ 0.12
SGCA-202ENST00000344627 CCT4P50991 539 aaKnown RBP15.77■□□□□ 0.12
SGCA-202ENST00000344627 CDCA5Q96FF9 252 aa15.77■□□□□ 0.12
SGCA-202ENST00000344627 MPHOSPH8Q99549 860 aa15.77■□□□□ 0.12
SGCA-202ENST00000344627 CHMP3Q9Y3E7 222 aa15.77■□□□□ 0.12
SGCA-202ENST00000344627 POLR2AP24928 1970 aaKnown RBP15.76■□□□□ 0.11
SGCA-202ENST00000344627 CCDC85CA6NKD9 419 aa15.76■□□□□ 0.11
SGCA-202ENST00000344627 ITGA6P23229 1130 aa15.76■□□□□ 0.11
SGCA-202ENST00000344627 NF2P35240 595 aa15.76■□□□□ 0.11
SGCA-202ENST00000344627 MLLT1Q03111 559 aaPredicted RBP15.76■□□□□ 0.11
SGCA-202ENST00000344627 ANGEL2Q5VTE6 544 aaKnown RBP15.76■□□□□ 0.11
SGCA-202ENST00000344627 SLC4A10Q6U841 1118 aa15.76■□□□□ 0.11
SGCA-202ENST00000344627 KIF23Q02241 960 aaPredicted RBP15.75■□□□□ 0.11
SGCA-202ENST00000344627 FAM161AQ3B820 660 aa15.75■□□□□ 0.11
SGCA-202ENST00000344627 FBXW7Q969H0 707 aa15.75■□□□□ 0.11
SGCA-202ENST00000344627 MCOLN1Q9GZU1 580 aa15.75■□□□□ 0.11
SGCA-202ENST00000344627 HDAC9Q9UKV0 1011 aa15.75■□□□□ 0.11
SGCA-202ENST00000344627 SCN9AQ15858 1988 aa15.75■□□□□ 0.11
SGCA-202ENST00000344627 WTIPA6NIX2 430 aaPredicted RBP15.74■□□□□ 0.11
SGCA-202ENST00000344627 CSF1RP07333 972 aa15.74■□□□□ 0.11
SGCA-202ENST00000344627 KCNJ4P48050 445 aa15.74■□□□□ 0.11
SGCA-202ENST00000344627 DACT2Q5SW24 774 aa15.74■□□□□ 0.11
SGCA-202ENST00000344627 ANKRD18BA2A2Z9 1011 aa15.73■□□□□ 0.11
SGCA-202ENST00000344627 CASP7P55210 303 aa15.73■□□□□ 0.11
SGCA-202ENST00000344627 DGKZQ13574 1117 aa15.73■□□□□ 0.11
SGCA-202ENST00000344627 RNF186Q9NXI6 227 aa15.73■□□□□ 0.11
SGCA-202ENST00000344627 C9orf78Q9NZ63 289 aaPredicted RBP15.73■□□□□ 0.11
SGCA-202ENST00000344627 TSKSQ9UJT2 592 aa15.73■□□□□ 0.11
SGCA-202ENST00000344627 ZNF804BA4D1E1 1349 aa15.72■□□□□ 0.11
SGCA-202ENST00000344627 UNCXA6NJT0 531 aa15.72■□□□□ 0.11
SGCA-202ENST00000344627 IFIT5Q13325 482 aaKnown RBP15.72■□□□□ 0.11
SGCA-202ENST00000344627 PKN2Q16513 984 aaKnown RBP15.72■□□□□ 0.11
SGCA-202ENST00000344627 NOM1Q5C9Z4 860 aaKnown RBP15.72■□□□□ 0.11
SGCA-202ENST00000344627 TAF7LQ5H9L4 462 aa15.72■□□□□ 0.11
SGCA-202ENST00000344627 BEND3Q5T5X7 828 aa15.72■□□□□ 0.11
SGCA-202ENST00000344627 C15orf52Q6ZUT6 534 aaKnown RBP15.72■□□□□ 0.11
SGCA-202ENST00000344627 APOBEC3FQ8IUX4 373 aaKnown RBP15.72■□□□□ 0.11
SGCA-202ENST00000344627 CSRNP1Q96S65 589 aa15.72■□□□□ 0.11
SGCA-202ENST00000344627 TTLL5Q6EMB2 1281 aa15.71■□□□□ 0.11
SGCA-202ENST00000344627 RASAL3Q86YV0 1011 aa15.71■□□□□ 0.11
SGCA-202ENST00000344627 PAPPA2Q9BXP8 1791 aa15.71■□□□□ 0.11
SGCA-202ENST00000344627 COL1A1P02452 1464 aaPredicted RBP15.71■□□□□ 0.1
SGCA-202ENST00000344627 E9PSI1 815 aa15.7■□□□□ 0.1
SGCA-202ENST00000344627 GRM8O00222 908 aa15.7■□□□□ 0.1
SGCA-202ENST00000344627 WNT10BO00744 389 aa15.7■□□□□ 0.1
SGCA-202ENST00000344627 FKBP1AP62942 108 aaKnown RBP15.7■□□□□ 0.1
SGCA-202ENST00000344627 LMBR1LQ6UX01 489 aa15.7■□□□□ 0.1
SGCA-202ENST00000344627 ARMC9Q7Z3E5 817 aa15.7■□□□□ 0.1
SGCA-202ENST00000344627 SRCIN1Q9C0H9 1055 aa15.7■□□□□ 0.1
SGCA-202ENST00000344627 PPP2R3BQ9Y5P8 575 aa15.7■□□□□ 0.1
SGCA-202ENST00000344627 PSME4Q14997 1843 aa15.69■□□□□ 0.1
SGCA-202ENST00000344627 PLIN1O60240 522 aa15.69■□□□□ 0.1
SGCA-202ENST00000344627 TRPA1O75762 1119 aa15.69■□□□□ 0.1
SGCA-202ENST00000344627 FOXO4P98177 505 aa15.69■□□□□ 0.1
SGCA-202ENST00000344627 CHRNDQ07001 517 aa15.69■□□□□ 0.1
SGCA-202ENST00000344627 SREBF2Q12772 1141 aa15.69■□□□□ 0.1
SGCA-202ENST00000344627 CCDC57Q2TAC2 916 aa15.69■□□□□ 0.1
SGCA-202ENST00000344627 DLK2Q6UY11 383 aa15.69■□□□□ 0.1
SGCA-202ENST00000344627 MTMR14Q8NCE2 650 aa15.69■□□□□ 0.1
SGCA-202ENST00000344627 HELBQ8NG08 1087 aaPredicted RBP15.69■□□□□ 0.1
SGCA-202ENST00000344627 ZIC5Q96T25 663 aa15.69■□□□□ 0.1
SGCA-202ENST00000344627 ZNF521Q96K83 1311 aa15.68■□□□□ 0.1
SGCA-202ENST00000344627 TM4SF4P48230 202 aa15.68■□□□□ 0.1
SGCA-202ENST00000344627 INHBEP58166 350 aa15.68■□□□□ 0.1
SGCA-202ENST00000344627 CTU1Q7Z7A3 348 aaKnown RBP15.68■□□□□ 0.1
SGCA-202ENST00000344627 MXD3Q9BW11 206 aa15.68■□□□□ 0.1
SGCA-202ENST00000344627 CFHR5Q9BXR6 569 aa15.68■□□□□ 0.1
SGCA-202ENST00000344627 CNNM1Q9NRU3 951 aa15.68■□□□□ 0.1
SGCA-202ENST00000344627 ASTN2O75129 1339 aaPredicted RBP15.68■□□□□ 0.1
SGCA-202ENST00000344627 MYO1BO43795 1136 aa15.67■□□□□ 0.1
SGCA-202ENST00000344627 TAF5LO75529 589 aa15.67■□□□□ 0.1
SGCA-202ENST00000344627 ALDH1L1O75891 902 aa15.67■□□□□ 0.1
SGCA-202ENST00000344627 ALDH1A1P00352 501 aa15.67■□□□□ 0.1
SGCA-202ENST00000344627 NBPF9Q3BBW0 867 aa15.67■□□□□ 0.1
SGCA-202ENST00000344627 TXNRD3Q86VQ6 643 aa15.67■□□□□ 0.1
SGCA-202ENST00000344627 MRPL50Q8N5N7 158 aaKnown RBP15.67■□□□□ 0.1
SGCA-202ENST00000344627 ZNF594Q96JF6 807 aaPredicted RBP15.67■□□□□ 0.1
SGCA-202ENST00000344627 CD209Q9NNX6 404 aa15.67■□□□□ 0.1
SGCA-202ENST00000344627 KLRK1P26718 216 aa15.66■□□□□ 0.1
SGCA-202ENST00000344627 SLFN5Q08AF3 891 aa15.66■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms