RNA–Protein interactions for RNA: ENST00000344586.8

NKX2-3-201, Transcript of NK2 homeobox 3, humanhuman

APPRIS P1 TSL 2 BASIC

Gene NKX2-3, Length 2,097 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-3-201ENST00000344586 PPP4R3BQ5MIZ7 849 aa27.13■■□□□ 1.93
NKX2-3-201ENST00000344586 NEUROD6Q96NK8 337 aa27.13■■□□□ 1.93
NKX2-3-201ENST00000344586 E7EWF7 191 aa27.12■■□□□ 1.93
NKX2-3-201ENST00000344586 CCT2P78371 535 aaKnown RBP27.12■■□□□ 1.93
NKX2-3-201ENST00000344586 NCOA5Q9HCD5 579 aaKnown RBP27.12■■□□□ 1.93
NKX2-3-201ENST00000344586 ILDR1Q86SU0 546 aaPredicted RBP27.12■■□□□ 1.93
NKX2-3-201ENST00000344586 GPR108Q9NPR9 543 aa27.12■■□□□ 1.93
NKX2-3-201ENST00000344586 PRDM4Q9UKN5 801 aa27.12■■□□□ 1.93
NKX2-3-201ENST00000344586 PLEKHG2Q9H7P9 1386 aa27.12■■□□□ 1.93
NKX2-3-201ENST00000344586 ADAMTSL3P82987 1691 aa27.11■■□□□ 1.93
NKX2-3-201ENST00000344586 GOLGA6L19H0YKK7 550 aa27.11■■□□□ 1.93
NKX2-3-201ENST00000344586 HSPD1P10809 573 aaKnown RBP27.11■■□□□ 1.93
NKX2-3-201ENST00000344586 ATL3Q6DD88 541 aa27.11■■□□□ 1.93
NKX2-3-201ENST00000344586 PDCL2Q8N4E4 241 aa27.11■■□□□ 1.93
NKX2-3-201ENST00000344586 ENGASEQ8NFI3 743 aa27.11■■□□□ 1.93
NKX2-3-201ENST00000344586 MAST3O60307 1309 aa27.11■■□□□ 1.93
NKX2-3-201ENST00000344586 NUP188Q5SRE5 1749 aa27.11■■□□□ 1.93
NKX2-3-201ENST00000344586 TICAM2Q86XR7 235 aa27.1■■□□□ 1.93
NKX2-3-201ENST00000344586 MRFAP1L1Q96HT8 127 aa27.1■■□□□ 1.93
NKX2-3-201ENST00000344586 SMTNL1A8MU46 457 aa27.1■■□□□ 1.93
NKX2-3-201ENST00000344586 TIMM10P62072 90 aa27.1■■□□□ 1.93
NKX2-3-201ENST00000344586 CCDC73Q6ZRK6 1079 aa27.1■■□□□ 1.93
NKX2-3-201ENST00000344586 ZNF396Q96N95 335 aaPredicted RBP27.1■■□□□ 1.93
NKX2-3-201ENST00000344586 TMEM94Q12767 1356 aa27.09■■□□□ 1.93
NKX2-3-201ENST00000344586 PDIA3P30101 505 aaKnown RBP27.09■■□□□ 1.93
NKX2-3-201ENST00000344586 FAM160A1Q05DH4 1040 aa27.09■■□□□ 1.93
NKX2-3-201ENST00000344586 ATP2B3Q16720 1220 aa27.09■■□□□ 1.93
NKX2-3-201ENST00000344586 PRDM10Q9NQV6 1147 aa27.09■■□□□ 1.93
NKX2-3-201ENST00000344586 PARP4Q9UKK3 1724 aaKnown RBP27.09■■□□□ 1.93
NKX2-3-201ENST00000344586 NBPF26B4DH59 902 aa27.09■■□□□ 1.93
NKX2-3-201ENST00000344586 CSB-PGBD3P0DP91 1061 aa27.09■■□□□ 1.93
NKX2-3-201ENST00000344586 TNNT1P13805 278 aa27.09■■□□□ 1.93
NKX2-3-201ENST00000344586 NBPF14Q5TI25 921 aa27.09■■□□□ 1.93
NKX2-3-201ENST00000344586 NBPF10Q6P3W6 841 aaKnown RBP27.09■■□□□ 1.93
NKX2-3-201ENST00000344586 DHX40Q8IX18 779 aaKnown RBP27.09■■□□□ 1.93
NKX2-3-201ENST00000344586 NBPF15Q8N660 670 aa27.09■■□□□ 1.93
NKX2-3-201ENST00000344586 CARMIL3Q8ND23 1372 aa27.08■■□□□ 1.93
NKX2-3-201ENST00000344586 CABP4P57796 275 aa27.08■■□□□ 1.93
NKX2-3-201ENST00000344586 ZNF274Q96GC6 653 aaPredicted RBP27.08■■□□□ 1.93
NKX2-3-201ENST00000344586 SPEF2Q9C093 1822 aa27.08■■□□□ 1.93
NKX2-3-201ENST00000344586 KINO60870 393 aaKnown RBP27.07■■□□□ 1.92
NKX2-3-201ENST00000344586 IL15P40933 162 aaPredicted RBP27.07■■□□□ 1.92
NKX2-3-201ENST00000344586 GUCY1B3Q02153 619 aa27.07■■□□□ 1.92
NKX2-3-201ENST00000344586 LRRC8AQ8IWT6 810 aa27.07■■□□□ 1.92
NKX2-3-201ENST00000344586 RNF113AO15541 343 aaKnown RBP27.07■■□□□ 1.92
NKX2-3-201ENST00000344586 PPFIA3O75145 1194 aa27.07■■□□□ 1.92
NKX2-3-201ENST00000344586 CHST3Q7LGC8 479 aa27.07■■□□□ 1.92
NKX2-3-201ENST00000344586 FSIP1Q8NA03 581 aa27.07■■□□□ 1.92
NKX2-3-201ENST00000344586 A0A087WWV3 80 aa27.06■■□□□ 1.92
NKX2-3-201ENST00000344586 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP27.06■■□□□ 1.92
NKX2-3-201ENST00000344586 M0R2C6 588 aa27.06■■□□□ 1.92
NKX2-3-201ENST00000344586 NCBP1Q09161 790 aaKnown RBP27.06■■□□□ 1.92
NKX2-3-201ENST00000344586 LRRC24Q50LG9 513 aa27.06■■□□□ 1.92
NKX2-3-201ENST00000344586 CWC25Q9NXE8 425 aaPredicted RBP27.06■■□□□ 1.92
NKX2-3-201ENST00000344586 NAP1L2Q9ULW6 460 aaPredicted RBP27.06■■□□□ 1.92
NKX2-3-201ENST00000344586 ARID5BQ14865 1188 aa27.05■■□□□ 1.92
NKX2-3-201ENST00000344586 PROSER2Q86WR7 435 aaPredicted RBP27.05■■□□□ 1.92
NKX2-3-201ENST00000344586 IFIT1P09914 478 aaKnown RBP27.05■■□□□ 1.92
NKX2-3-201ENST00000344586 ME1P48163 572 aa27.05■■□□□ 1.92
NKX2-3-201ENST00000344586 CBX1P83916 185 aa27.05■■□□□ 1.92
NKX2-3-201ENST00000344586 TPD52L1Q16890 204 aaPredicted RBP27.05■■□□□ 1.92
NKX2-3-201ENST00000344586 TTLL7Q6ZT98 887 aa27.05■■□□□ 1.92
NKX2-3-201ENST00000344586 ANO10Q9NW15 660 aa27.05■■□□□ 1.92
NKX2-3-201ENST00000344586 EYA2O00167 538 aa27.04■■□□□ 1.92
NKX2-3-201ENST00000344586 FDPSP14324 419 aaKnown RBP27.04■■□□□ 1.92
NKX2-3-201ENST00000344586 RBM6P78332 1123 aaKnown RBP27.04■■□□□ 1.92
NKX2-3-201ENST00000344586 SYCP1Q15431 976 aa27.04■■□□□ 1.92
NKX2-3-201ENST00000344586 TTLL5Q6EMB2 1281 aa27.04■■□□□ 1.92
NKX2-3-201ENST00000344586 ZNF594Q96JF6 807 aaPredicted RBP27.04■■□□□ 1.92
NKX2-3-201ENST00000344586 PAXBP1Q9Y5B6 917 aa27.04■■□□□ 1.92
NKX2-3-201ENST00000344586 A0A1B0GUL7 405 aa27.03■■□□□ 1.92
NKX2-3-201ENST00000344586 NEMFO60524 1076 aa27.03■■□□□ 1.92
NKX2-3-201ENST00000344586 FMR1NBQ8N0W7 255 aaPredicted RBP27.03■■□□□ 1.92
NKX2-3-201ENST00000344586 FBXL16Q8N461 479 aa27.03■■□□□ 1.92
NKX2-3-201ENST00000344586 NWD2Q9ULI1 1742 aa27.03■■□□□ 1.92
NKX2-3-201ENST00000344586 BECN2A8MW95 431 aa27.02■■□□□ 1.92
NKX2-3-201ENST00000344586 EVCP57679 992 aa27.02■■□□□ 1.92
NKX2-3-201ENST00000344586 DDX17Q92841 729 aaKnown RBP27.02■■□□□ 1.92
NKX2-3-201ENST00000344586 ZSCAN20P17040 1043 aaPredicted RBP27.02■■□□□ 1.92
NKX2-3-201ENST00000344586 CHRNA2Q15822 529 aa27.02■■□□□ 1.92
NKX2-3-201ENST00000344586 MRPS27Q92552 414 aaKnown RBP27.02■■□□□ 1.92
NKX2-3-201ENST00000344586 C19orf44Q9H6X5 657 aa27.02■■□□□ 1.92
NKX2-3-201ENST00000344586 PCDHA7Q9UN72 937 aa27.02■■□□□ 1.92
NKX2-3-201ENST00000344586 CEP57L1Q8IYX8 460 aa27.01■■□□□ 1.91
NKX2-3-201ENST00000344586 GPHNQ9NQX3 736 aaPredicted RBP27.01■■□□□ 1.91
NKX2-3-201ENST00000344586 RTEL1Q9NZ71 1219 aa27.01■■□□□ 1.91
NKX2-3-201ENST00000344586 USP27XA6NNY8 438 aa27.01■■□□□ 1.91
NKX2-3-201ENST00000344586 CIAO1O76071 339 aa27.01■■□□□ 1.91
NKX2-3-201ENST00000344586 CABLES1Q8TDN4 633 aa27.01■■□□□ 1.91
NKX2-3-201ENST00000344586 PPIL4Q8WUA2 492 aaKnown RBP eCLIP27.01■■□□□ 1.91
NKX2-3-201ENST00000344586 ERCC4Q92889 916 aaPredicted RBP27.01■■□□□ 1.91
NKX2-3-201ENST00000344586 OSBP2Q969R2 916 aa27.01■■□□□ 1.91
NKX2-3-201ENST00000344586 UBR2Q8IWV8 1755 aa27■■□□□ 1.91
NKX2-3-201ENST00000344586 FOXP2O15409 715 aa27■■□□□ 1.91
NKX2-3-201ENST00000344586 U2AF2P26368 475 aaKnown RBP eCLIP27■■□□□ 1.91
NKX2-3-201ENST00000344586 AOPEPQ8N6M6 819 aa27■■□□□ 1.91
NKX2-3-201ENST00000344586 CHMP4CQ96CF2 233 aa27■■□□□ 1.91
NKX2-3-201ENST00000344586 CCDC112Q8NEF3 446 aa26.99■■□□□ 1.91
NKX2-3-201ENST00000344586 CCZ1BP86790 482 aa26.99■■□□□ 1.91
NKX2-3-201ENST00000344586 CCZ1P86791 482 aaPredicted RBP26.99■■□□□ 1.91
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms