RNA–Protein interactions for RNA: ENST00000341455.10

CCDC66-202, Transcript of coiled-coil domain containing 66, humanhuman

TSL 1 (best)

Gene CCDC66, Length 3,042 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC66-202ENST00000341455 UNCXA6NJT0 531 aa4.54□□□□□ -1.68
CCDC66-202ENST00000341455 IRF6O14896 467 aa4.54□□□□□ -1.68
CCDC66-202ENST00000341455 CYP19A1P11511 503 aaPredicted RBP4.54□□□□□ -1.68
CCDC66-202ENST00000341455 TNNT2P45379 298 aaPredicted RBP4.54□□□□□ -1.68
CCDC66-202ENST00000341455 PNMA8AQ86V59 439 aaPredicted RBP4.54□□□□□ -1.68
CCDC66-202ENST00000341455 LGR6Q9HBX8 967 aa4.54□□□□□ -1.68
CCDC66-202ENST00000341455 TMOD3Q9NYL9 352 aa4.54□□□□□ -1.68
CCDC66-202ENST00000341455 USP42Q9H9J4 1324 aaKnown RBP4.54□□□□□ -1.68
CCDC66-202ENST00000341455 SLC19A1P41440 591 aa4.54□□□□□ -1.68
CCDC66-202ENST00000341455 PRSS12P56730 875 aa4.54□□□□□ -1.68
CCDC66-202ENST00000341455 RIPK4P57078 832 aa4.54□□□□□ -1.68
CCDC66-202ENST00000341455 MAP2K5Q13163 448 aa4.54□□□□□ -1.68
CCDC66-202ENST00000341455 PDIA6Q15084 440 aa4.54□□□□□ -1.68
CCDC66-202ENST00000341455 ALDH1L2Q3SY69 923 aa4.54□□□□□ -1.68
CCDC66-202ENST00000341455 INTS5Q6P9B9 1019 aaKnown RBP4.54□□□□□ -1.68
CCDC66-202ENST00000341455 SYNGAP1Q96PV0 1343 aa4.54□□□□□ -1.68
CCDC66-202ENST00000341455 U2SURPO15042 1029 aaKnown RBP4.54□□□□□ -1.68
CCDC66-202ENST00000341455 FMNL2Q96PY5 1086 aa4.54□□□□□ -1.68
CCDC66-202ENST00000341455 LOC102724428A0A0B4J2F2 783 aa4.53□□□□□ -1.68
CCDC66-202ENST00000341455 ERVV-1B6SEH8 477 aa4.53□□□□□ -1.68
CCDC66-202ENST00000341455 IL6STP40189 918 aaPredicted RBP4.53□□□□□ -1.68
CCDC66-202ENST00000341455 PRIM1P49642 420 aaKnown RBP4.53□□□□□ -1.68
CCDC66-202ENST00000341455 SIK1P57059 783 aa4.53□□□□□ -1.68
CCDC66-202ENST00000341455 CABP4P57796 275 aa4.53□□□□□ -1.68
CCDC66-202ENST00000341455 DUSP27Q5VZP5 1158 aa4.53□□□□□ -1.68
CCDC66-202ENST00000341455 SPRYD7Q5W111 196 aa4.53□□□□□ -1.68
CCDC66-202ENST00000341455 TTC13Q8NBP0 860 aa4.53□□□□□ -1.68
CCDC66-202ENST00000341455 LTV1Q96GA3 475 aaPredicted RBP4.53□□□□□ -1.68
CCDC66-202ENST00000341455 WDR33Q9C0J8 1336 aaKnown RBP4.53□□□□□ -1.68
CCDC66-202ENST00000341455 FANCIQ9NVI1 1328 aa4.53□□□□□ -1.68
CCDC66-202ENST00000341455 RTL9Q8NET4 1388 aa4.53□□□□□ -1.68
CCDC66-202ENST00000341455 NEFMP07197 916 aa4.53□□□□□ -1.68
CCDC66-202ENST00000341455 SNRPA1P09661 255 aaKnown RBP4.53□□□□□ -1.68
CCDC66-202ENST00000341455 RPIAP49247 311 aa4.53□□□□□ -1.68
CCDC66-202ENST00000341455 EIF5P55010 431 aaKnown RBP4.53□□□□□ -1.68
CCDC66-202ENST00000341455 ITPK1Q13572 414 aa4.53□□□□□ -1.68
CCDC66-202ENST00000341455 TRIM67Q6ZTA4 783 aa4.53□□□□□ -1.68
CCDC66-202ENST00000341455 LINC00116Q8NCU8 138 aa4.53□□□□□ -1.68
CCDC66-202ENST00000341455 MYH16Q9H6N6 1097 aa4.53□□□□□ -1.68
CCDC66-202ENST00000341455 MBIPQ9NS73 344 aa4.53□□□□□ -1.68
CCDC66-202ENST00000341455 USP35Q9P2H5 1018 aa4.53□□□□□ -1.68
CCDC66-202ENST00000341455 UTYO14607 1347 aa4.53□□□□□ -1.68
CCDC66-202ENST00000341455 CACNA1SQ13698 1873 aa4.52□□□□□ -1.69
CCDC66-202ENST00000341455 A0A087WZG4 1122 aa4.52□□□□□ -1.69
CCDC66-202ENST00000341455 APAF1O14727 1248 aa4.52□□□□□ -1.69
CCDC66-202ENST00000341455 PPM1GO15355 546 aaPredicted RBP4.52□□□□□ -1.69
CCDC66-202ENST00000341455 WFS1O76024 890 aa4.52□□□□□ -1.69
CCDC66-202ENST00000341455 TRIM28Q13263 835 aaKnown RBP4.52□□□□□ -1.69
CCDC66-202ENST00000341455 TTLL12Q14166 644 aaPredicted RBP4.52□□□□□ -1.69
CCDC66-202ENST00000341455 CC2D2BQ6DHV5 1058 aa4.52□□□□□ -1.69
CCDC66-202ENST00000341455 ARHGAP45Q92619 1136 aa4.52□□□□□ -1.69
CCDC66-202ENST00000341455 EMILIN3Q9NT22 766 aa4.52□□□□□ -1.69
CCDC66-202ENST00000341455 MS4A1P11836 297 aa4.52□□□□□ -1.69
CCDC66-202ENST00000341455 GYS1P13807 737 aa4.52□□□□□ -1.69
CCDC66-202ENST00000341455 VEGFBP49765 207 aa4.52□□□□□ -1.69
CCDC66-202ENST00000341455 CLEC4GQ6UXB4 293 aa4.52□□□□□ -1.69
CCDC66-202ENST00000341455 MPRIPQ6WCQ1 1025 aa4.52□□□□□ -1.69
CCDC66-202ENST00000341455 NBPF15Q8N660 670 aa4.52□□□□□ -1.69
CCDC66-202ENST00000341455 NFATC2IPQ8NCF5 419 aa4.52□□□□□ -1.69
CCDC66-202ENST00000341455 RTF1Q92541 710 aaKnown RBP4.52□□□□□ -1.69
CCDC66-202ENST00000341455 BTBD11A6QL63 1104 aa4.51□□□□□ -1.69
CCDC66-202ENST00000341455 POLRMTO00411 1230 aaKnown RBP4.51□□□□□ -1.69
CCDC66-202ENST00000341455 GDF9O60383 454 aa4.51□□□□□ -1.69
CCDC66-202ENST00000341455 DPEP1P16444 411 aa4.51□□□□□ -1.69
CCDC66-202ENST00000341455 NPAS3Q8IXF0 933 aa4.51□□□□□ -1.69
CCDC66-202ENST00000341455 SLX4Q8IY92 1834 aa4.51□□□□□ -1.69
CCDC66-202ENST00000341455 ASAP1Q9ULH1 1129 aa4.51□□□□□ -1.69
CCDC66-202ENST00000341455 PTPRCP08575 1304 aa4.51□□□□□ -1.69
CCDC66-202ENST00000341455 ZPR1O75312 459 aa4.51□□□□□ -1.69
CCDC66-202ENST00000341455 INTS3Q68E01 1043 aaKnown RBP4.51□□□□□ -1.69
CCDC66-202ENST00000341455 USP50Q70EL3 339 aaPredicted RBP4.51□□□□□ -1.69
CCDC66-202ENST00000341455 ZNF496Q96IT1 587 aaPredicted RBP4.51□□□□□ -1.69
CCDC66-202ENST00000341455 PRO3102Q9H379 93 aa4.51□□□□□ -1.69
CCDC66-202ENST00000341455 RRAGCQ9HB90 399 aa4.51□□□□□ -1.69
CCDC66-202ENST00000341455 TSKSQ9UJT2 592 aa4.51□□□□□ -1.69
CCDC66-202ENST00000341455 VAMP4O75379 141 aa4.51□□□□□ -1.69
CCDC66-202ENST00000341455 TEFQ10587 303 aa4.51□□□□□ -1.69
CCDC66-202ENST00000341455 MCM10Q7L590 875 aa4.51□□□□□ -1.69
CCDC66-202ENST00000341455 TATDN2Q93075 761 aa4.51□□□□□ -1.69
CCDC66-202ENST00000341455 PSMD1Q99460 953 aa4.51□□□□□ -1.69
CCDC66-202ENST00000341455 DDX21Q9NR30 783 aaKnown RBP eCLIP4.51□□□□□ -1.69
CCDC66-202ENST00000341455 FZD9O00144 591 aa4.5□□□□□ -1.69
CCDC66-202ENST00000341455 GIGYF2Q6Y7W6 1299 aaKnown RBP4.5□□□□□ -1.69
CCDC66-202ENST00000341455 MCOLN1Q9GZU1 580 aa4.5□□□□□ -1.69
CCDC66-202ENST00000341455 SEPT9Q9UHD8 586 aaPredicted RBP4.5□□□□□ -1.69
CCDC66-202ENST00000341455 COG6Q9Y2V7 657 aa4.5□□□□□ -1.69
CCDC66-202ENST00000341455 PARP3Q9Y6F1 533 aa4.5□□□□□ -1.69
CCDC66-202ENST00000341455 ABCC4O15439 1325 aa4.5□□□□□ -1.69
CCDC66-202ENST00000341455 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP4.5□□□□□ -1.69
CCDC66-202ENST00000341455 DPYSL4O14531 572 aa4.5□□□□□ -1.69
CCDC66-202ENST00000341455 CAMTA2O94983 1202 aa4.5□□□□□ -1.69
CCDC66-202ENST00000341455 CRKLP46109 303 aaKnown RBP4.5□□□□□ -1.69
CCDC66-202ENST00000341455 NBPF10Q6P3W6 841 aaKnown RBP4.5□□□□□ -1.69
CCDC66-202ENST00000341455 SAMD7Q7Z3H4 446 aa4.5□□□□□ -1.69
CCDC66-202ENST00000341455 DDX54Q8TDD1 881 aaKnown RBP4.5□□□□□ -1.69
CCDC66-202ENST00000341455 C7orf43Q8WVR3 580 aa4.5□□□□□ -1.69
CCDC66-202ENST00000341455 TAF1DQ9H5J8 278 aaPredicted RBP4.5□□□□□ -1.69
CCDC66-202ENST00000341455 HYPKQ9NX55 129 aa4.5□□□□□ -1.69
CCDC66-202ENST00000341455 NARFQ9UHQ1 456 aa4.5□□□□□ -1.69
CCDC66-202ENST00000341455 ZNF330Q9Y3S2 320 aaPredicted RBP4.5□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms