RNA–Protein interactions for RNA: ENST00000340648.5

RRP1B-201, Transcript of ribosomal RNA processing 1B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RRP1B, Length 5,090 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RRP1B-201ENST00000340648 TTC37Q6PGP7 1564 aa16.99■□□□□ 0.31
RRP1B-201ENST00000340648 TTF1Q15361 905 aaPredicted RBP16.99■□□□□ 0.31
RRP1B-201ENST00000340648 RRAGBQ5VZM2 374 aa16.99■□□□□ 0.31
RRP1B-201ENST00000340648 CATIPQ7Z7H3 387 aa16.99■□□□□ 0.31
RRP1B-201ENST00000340648 RNF113AO15541 343 aaKnown RBP16.99■□□□□ 0.31
RRP1B-201ENST00000340648 NR1I2O75469 434 aa16.98■□□□□ 0.31
RRP1B-201ENST00000340648 TDRD12Q587J7 1177 aaKnown RBP16.98■□□□□ 0.31
RRP1B-201ENST00000340648 BRAPQ7Z569 592 aa16.98■□□□□ 0.31
RRP1B-201ENST00000340648 USP44Q9H0E7 712 aa16.98■□□□□ 0.31
RRP1B-201ENST00000340648 HOXC9P31274 260 aa16.98■□□□□ 0.31
RRP1B-201ENST00000340648 IL15P40933 162 aaPredicted RBP16.98■□□□□ 0.31
RRP1B-201ENST00000340648 TTC6Q86TZ1 520 aa16.98■□□□□ 0.31
RRP1B-201ENST00000340648 DHX58Q96C10 678 aa16.98■□□□□ 0.31
RRP1B-201ENST00000340648 SEPT11Q9NVA2 429 aaKnown RBP16.98■□□□□ 0.31
RRP1B-201ENST00000340648 CTAGE9A4FU28 777 aa16.98■□□□□ 0.31
RRP1B-201ENST00000340648 RHOXF2BP0C7M4 288 aa16.98■□□□□ 0.31
RRP1B-201ENST00000340648 SLC5A1P13866 664 aa16.98■□□□□ 0.31
RRP1B-201ENST00000340648 RNF187Q5TA31 235 aaPredicted RBP16.98■□□□□ 0.31
RRP1B-201ENST00000340648 CEP112Q8N8E3 955 aa16.98■□□□□ 0.31
RRP1B-201ENST00000340648 RHOXF2Q9BQY4 288 aa16.98■□□□□ 0.31
RRP1B-201ENST00000340648 ATL3Q6DD88 541 aa16.98■□□□□ 0.31
RRP1B-201ENST00000340648 CARD6Q9BX69 1037 aa16.98■□□□□ 0.31
RRP1B-201ENST00000340648 BAG1Q99933 345 aaPredicted RBP16.97■□□□□ 0.31
RRP1B-201ENST00000340648 TM6SF1Q9BZW5 370 aa16.97■□□□□ 0.31
RRP1B-201ENST00000340648 TMOD3Q9NYL9 352 aa16.97■□□□□ 0.31
RRP1B-201ENST00000340648 SAMD9LQ8IVG5 1584 aa16.97■□□□□ 0.31
RRP1B-201ENST00000340648 CCDC194A0A1B0GVG4 234 aa16.97■□□□□ 0.31
RRP1B-201ENST00000340648 SYCP1Q15431 976 aa16.97■□□□□ 0.31
RRP1B-201ENST00000340648 RASEFQ8IZ41 740 aa16.97■□□□□ 0.31
RRP1B-201ENST00000340648 WTAPQ15007 396 aa16.97■□□□□ 0.31
RRP1B-201ENST00000340648 ZNF569Q5MCW4 686 aa16.97■□□□□ 0.31
RRP1B-201ENST00000340648 CTAGE1Q96RT6 745 aa16.97■□□□□ 0.31
RRP1B-201ENST00000340648 TPCN1Q9ULQ1 816 aa16.97■□□□□ 0.31
RRP1B-201ENST00000340648 UHRF1BP1LA0JNW5 1464 aa16.97■□□□□ 0.31
RRP1B-201ENST00000340648 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP16.97■□□□□ 0.314e-7■■■■□ 23.9
RRP1B-201ENST00000340648 IVLP07476 585 aa16.96■□□□□ 0.31
RRP1B-201ENST00000340648 FANCCQ00597 558 aa16.96■□□□□ 0.31
RRP1B-201ENST00000340648 FAM107BQ9H098 131 aa16.96■□□□□ 0.31
RRP1B-201ENST00000340648 SLC9C2Q5TAH2 1124 aa16.96■□□□□ 0.31
RRP1B-201ENST00000340648 UGGT1Q9NYU2 1555 aa16.96■□□□□ 0.31
RRP1B-201ENST00000340648 PPP2R3AQ06190 1150 aa16.96■□□□□ 0.31
RRP1B-201ENST00000340648 CUL4AQ13619 759 aa16.96■□□□□ 0.31
RRP1B-201ENST00000340648 SSH3Q8TE77 659 aa16.96■□□□□ 0.31
RRP1B-201ENST00000340648 DBNDD2Q9BQY9 259 aa16.96■□□□□ 0.31
RRP1B-201ENST00000340648 USP5P45974 858 aa16.96■□□□□ 0.3
RRP1B-201ENST00000340648 RTN1Q16799 776 aa16.96■□□□□ 0.3
RRP1B-201ENST00000340648 C10orf67Q8IYJ2 551 aa16.96■□□□□ 0.3
RRP1B-201ENST00000340648 TRIM47Q96LD4 638 aa16.96■□□□□ 0.3
RRP1B-201ENST00000340648 ZNF215Q9UL58 517 aaPredicted RBP16.95■□□□□ 0.3
RRP1B-201ENST00000340648 TRIM21P19474 475 aaKnown RBP16.95■□□□□ 0.3
RRP1B-201ENST00000340648 ATP2B3Q16720 1220 aa16.95■□□□□ 0.3
RRP1B-201ENST00000340648 BCCIPQ9P287 314 aaKnown RBP eCLIP16.95■□□□□ 0.34e-11■■■■■ 35.4
RRP1B-201ENST00000340648 NRBP1Q9UHY1 535 aa16.95■□□□□ 0.3
RRP1B-201ENST00000340648 CCDC178Q5BJE1 867 aa16.95■□□□□ 0.3
RRP1B-201ENST00000340648 EDC3Q96F86 508 aaKnown RBP16.95■□□□□ 0.3
RRP1B-201ENST00000340648 ALS2CR12Q96Q35 445 aa16.95■□□□□ 0.3
RRP1B-201ENST00000340648 LLPHQ9BRT6 129 aaKnown RBP16.95■□□□□ 0.3
RRP1B-201ENST00000340648 TNRQ92752 1358 aa16.95■□□□□ 0.3
RRP1B-201ENST00000340648 TRPM1Q7Z4N2 1603 aa16.94■□□□□ 0.3
RRP1B-201ENST00000340648 FAM135BQ49AJ0 1406 aa16.94■□□□□ 0.3
RRP1B-201ENST00000340648 ELP1O95163 1332 aa16.94■□□□□ 0.3
RRP1B-201ENST00000340648 GPATCH11Q8N954 259 aa16.94■□□□□ 0.3
RRP1B-201ENST00000340648 SUCLG2Q96I99 432 aa16.94■□□□□ 0.3
RRP1B-201ENST00000340648 DRC1Q96MC2 740 aa16.94■□□□□ 0.3
RRP1B-201ENST00000340648 OSBPL3Q9H4L5 887 aa16.94■□□□□ 0.3
RRP1B-201ENST00000340648 TNNI3KQ59H18 835 aa16.94■□□□□ 0.3
RRP1B-201ENST00000340648 KRBA2Q6ZNG9 492 aa16.94■□□□□ 0.3
RRP1B-201ENST00000340648 GIMAP7Q8NHV1 300 aa16.94■□□□□ 0.3
RRP1B-201ENST00000340648 LGR6Q9HBX8 967 aa16.94■□□□□ 0.3
RRP1B-201ENST00000340648 FPGT-TNNI3KV9GXZ4 949 aa16.94■□□□□ 0.3
RRP1B-201ENST00000340648 HLTFQ14527 1009 aaKnown RBP eCLIP16.94■□□□□ 0.36e-6■■■■□ 22
RRP1B-201ENST00000340648 PLCD4Q9BRC7 762 aa16.94■□□□□ 0.3
RRP1B-201ENST00000340648 UBA7P41226 1012 aa16.94■□□□□ 0.3
RRP1B-201ENST00000340648 BICDL1Q6ZP65 573 aa16.94■□□□□ 0.3
RRP1B-201ENST00000340648 TIMM10P62072 90 aa16.93■□□□□ 0.3
RRP1B-201ENST00000340648 ADCK5Q3MIX3 580 aa16.93■□□□□ 0.3
RRP1B-201ENST00000340648 ANO1Q5XXA6 986 aa16.93■□□□□ 0.3
RRP1B-201ENST00000340648 NFATC2IPQ8NCF5 419 aa16.93■□□□□ 0.3
RRP1B-201ENST00000340648 ZSWIM6Q9HCJ5 1215 aa16.93■□□□□ 0.3
RRP1B-201ENST00000340648 CTDP1Q9Y5B0 961 aaPredicted RBP16.93■□□□□ 0.3
RRP1B-201ENST00000340648 MKNK2Q9HBH9 465 aa16.93■□□□□ 0.3
RRP1B-201ENST00000340648 GOLGA6L7A0A1B0GV03 622 aa16.93■□□□□ 0.3
RRP1B-201ENST00000340648 EHBP1Q8NDI1 1231 aa16.93■□□□□ 0.3
RRP1B-201ENST00000340648 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP16.93■□□□□ 0.3
RRP1B-201ENST00000340648 XPO4Q9C0E2 1151 aaKnown RBP16.93■□□□□ 0.3
RRP1B-201ENST00000340648 LSG1Q9H089 658 aaKnown RBP16.93■□□□□ 0.3
RRP1B-201ENST00000340648 GUCA1BQ9UMX6 200 aa16.93■□□□□ 0.3
RRP1B-201ENST00000340648 MRVI1Q9Y6F6 885 aa16.93■□□□□ 0.3
RRP1B-201ENST00000340648 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP16.93■□□□□ 0.3
RRP1B-201ENST00000340648 CAPZA3Q96KX2 299 aa16.93■□□□□ 0.3
RRP1B-201ENST00000340648 IMPACTQ9P2X3 320 aa16.93■□□□□ 0.3
RRP1B-201ENST00000340648 TRPM2O94759 1503 aa16.92■□□□□ 0.3
RRP1B-201ENST00000340648 CKAP4Q07065 602 aaKnown RBP16.92■□□□□ 0.3
RRP1B-201ENST00000340648 DDX21Q9NR30 783 aaKnown RBP eCLIP16.92■□□□□ 0.3
RRP1B-201ENST00000340648 CFAP65Q6ZU64 1925 aaKnown RBP16.92■□□□□ 0.3
RRP1B-201ENST00000340648 TARBP1Q13395 1621 aaKnown RBP16.92■□□□□ 0.3
RRP1B-201ENST00000340648 A0A0D9SFI3 127 aa16.92■□□□□ 0.3
RRP1B-201ENST00000340648 RNMTO43148 476 aaKnown RBP16.92■□□□□ 0.3
RRP1B-201ENST00000340648 KRT28Q7Z3Y7 464 aa16.92■□□□□ 0.3
RRP1B-201ENST00000340648 TSG101Q99816 390 aa16.92■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms