RNA–Protein interactions for RNA: ENST00000340611.8

BRAT1-201, Transcript of BRCA1 associated ATM activator 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BRAT1, Length 2,915 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRAT1-201ENST00000340611 ADORA1P30542 326 aa18.02■□□□□ 0.48
BRAT1-201ENST00000340611 CHAMP1Q96JM3 812 aa18.02■□□□□ 0.48
BRAT1-201ENST00000340611 SCN7AQ01118 1682 aa18.02■□□□□ 0.48
BRAT1-201ENST00000340611 EZH2Q15910 746 aaKnown RBP18.02■□□□□ 0.48
BRAT1-201ENST00000340611 SLC27A3Q5K4L6 730 aa18.02■□□□□ 0.48
BRAT1-201ENST00000340611 TUBGCP6Q96RT7 1819 aa18.02■□□□□ 0.48
BRAT1-201ENST00000340611 SPEF2Q9C093 1822 aa18.02■□□□□ 0.47
BRAT1-201ENST00000340611 TAF5LO75529 589 aa18.02■□□□□ 0.47
BRAT1-201ENST00000340611 RBSNQ9H1K0 784 aa18.02■□□□□ 0.47
BRAT1-201ENST00000340611 AK9Q5TCS8 1911 aa18.02■□□□□ 0.47
BRAT1-201ENST00000340611 ZSCAN23Q3MJ62 389 aa18.01■□□□□ 0.47
BRAT1-201ENST00000340611 DEFB132Q7Z7B7 95 aa18.01■□□□□ 0.47
BRAT1-201ENST00000340611 DHX37Q8IY37 1157 aaKnown RBP18.01■□□□□ 0.47
BRAT1-201ENST00000340611 SECISBP2LQ93073 1101 aaKnown RBP18.01■□□□□ 0.47
BRAT1-201ENST00000340611 RBM27Q9P2N5 1060 aaKnown RBP18.01■□□□□ 0.47
BRAT1-201ENST00000340611 GYS1P13807 737 aa18.01■□□□□ 0.47
BRAT1-201ENST00000340611 IL15P40933 162 aaPredicted RBP18.01■□□□□ 0.47
BRAT1-201ENST00000340611 IRX5P78411 483 aaPredicted RBP18.01■□□□□ 0.47
BRAT1-201ENST00000340611 A0A1B0GUL7 405 aa18■□□□□ 0.47
BRAT1-201ENST00000340611 METTL24Q5JXM2 366 aa18■□□□□ 0.47
BRAT1-201ENST00000340611 UTRNP46939 3433 aa18■□□□□ 0.47
BRAT1-201ENST00000340611 MSL1Q68DK7 614 aa18■□□□□ 0.47
BRAT1-201ENST00000340611 CEP126Q9P2H0 1117 aa18■□□□□ 0.47
BRAT1-201ENST00000340611 PTMAP06454 111 aaKnown RBP17.99■□□□□ 0.47
BRAT1-201ENST00000340611 DNAJC2Q99543 621 aaKnown RBP17.99■□□□□ 0.47
BRAT1-201ENST00000340611 LMBRD1Q9NUN5 540 aa17.99■□□□□ 0.47
BRAT1-201ENST00000340611 RIPOR2Q9Y4F9 1068 aa17.99■□□□□ 0.47
BRAT1-201ENST00000340611 PRPF40AO75400 957 aaKnown RBP17.99■□□□□ 0.47
BRAT1-201ENST00000340611 U2AF2P26368 475 aaKnown RBP eCLIP17.99■□□□□ 0.47
BRAT1-201ENST00000340611 SLFNL1Q499Z3 407 aa17.99■□□□□ 0.47
BRAT1-201ENST00000340611 COL23A1Q86Y22 540 aaPredicted RBP17.99■□□□□ 0.47
BRAT1-201ENST00000340611 PLSCR1O15162 318 aa17.98■□□□□ 0.47
BRAT1-201ENST00000340611 FOXD4L5Q5VV16 416 aaPredicted RBP17.98■□□□□ 0.47
BRAT1-201ENST00000340611 CLEC17AQ6ZS10 378 aa17.98■□□□□ 0.47
BRAT1-201ENST00000340611 FOXD4L4Q8WXT5 416 aaPredicted RBP17.98■□□□□ 0.47
BRAT1-201ENST00000340611 SNRKQ9NRH2 765 aa17.98■□□□□ 0.47
BRAT1-201ENST00000340611 GLRX3O76003 335 aaKnown RBP17.98■□□□□ 0.47
BRAT1-201ENST00000340611 ZNF445P59923 1031 aa17.98■□□□□ 0.47
BRAT1-201ENST00000340611 ZGPATQ8N5A5 531 aaKnown RBP17.98■□□□□ 0.47
BRAT1-201ENST00000340611 CASZ1Q86V15 1759 aa17.97■□□□□ 0.47
BRAT1-201ENST00000340611 CHMLP26374 656 aa17.97■□□□□ 0.47
BRAT1-201ENST00000340611 PI16Q6UXB8 463 aa17.97■□□□□ 0.47
BRAT1-201ENST00000340611 MYRIPQ8NFW9 859 aa17.97■□□□□ 0.47
BRAT1-201ENST00000340611 RIC1Q4ADV7 1423 aa17.97■□□□□ 0.47
BRAT1-201ENST00000340611 CCDC152Q4G0S7 254 aa17.97■□□□□ 0.47
BRAT1-201ENST00000340611 CELF1Q92879 486 aaKnown RBP17.97■□□□□ 0.47
BRAT1-201ENST00000340611 PDGFDQ9GZP0 370 aaPredicted RBP17.97■□□□□ 0.47
BRAT1-201ENST00000340611 TTC41PQ6P2S7 1318 aa17.97■□□□□ 0.47
BRAT1-201ENST00000340611 CWC27Q6UX04 472 aaKnown RBP17.96■□□□□ 0.47
BRAT1-201ENST00000340611 GPATCH3Q96I76 525 aa17.96■□□□□ 0.47
BRAT1-201ENST00000340611 MPHOSPH8Q99549 860 aa17.96■□□□□ 0.47
BRAT1-201ENST00000340611 TNS1Q9HBL0 1735 aaKnown RBP17.96■□□□□ 0.47
BRAT1-201ENST00000340611 ERC2O15083 957 aa17.96■□□□□ 0.47
BRAT1-201ENST00000340611 RABEP1Q15276 862 aa17.96■□□□□ 0.47
BRAT1-201ENST00000340611 DDX46Q7L014 1031 aaKnown RBP17.96■□□□□ 0.47
BRAT1-201ENST00000340611 RNF214Q8ND24 703 aa17.96■□□□□ 0.47
BRAT1-201ENST00000340611 CIAO1O76071 339 aa17.95■□□□□ 0.46
BRAT1-201ENST00000340611 TPTE2Q6XPS3 522 aa17.95■□□□□ 0.46
BRAT1-201ENST00000340611 TRERF1Q96PN7 1200 aa17.95■□□□□ 0.46
BRAT1-201ENST00000340611 NUCB2P80303 420 aa17.95■□□□□ 0.46
BRAT1-201ENST00000340611 DDR1Q08345 913 aa17.95■□□□□ 0.46
BRAT1-201ENST00000340611 C17orf53Q8N3J3 647 aaPredicted RBP17.95■□□□□ 0.46
BRAT1-201ENST00000340611 AKT1S1Q96B36 256 aa17.95■□□□□ 0.46
BRAT1-201ENST00000340611 XAGE2Q96GT9 111 aa17.95■□□□□ 0.46
BRAT1-201ENST00000340611 IRX3P78415 501 aaPredicted RBP17.95■□□□□ 0.46
BRAT1-201ENST00000340611 SCARF1Q14162 830 aa17.95■□□□□ 0.46
BRAT1-201ENST00000340611 ZNF609O15014 1411 aa17.94■□□□□ 0.46
BRAT1-201ENST00000340611 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP17.94■□□□□ 0.46
BRAT1-201ENST00000340611 HS1BP3Q53T59 392 aa17.94■□□□□ 0.46
BRAT1-201ENST00000340611 CNTROBQ8N137 903 aa17.94■□□□□ 0.46
BRAT1-201ENST00000340611 GPT2Q8TD30 523 aa17.94■□□□□ 0.46
BRAT1-201ENST00000340611 AOX1Q06278 1338 aa17.94■□□□□ 0.46
BRAT1-201ENST00000340611 GORABQ5T7V8 394 aa17.94■□□□□ 0.46
BRAT1-201ENST00000340611 TAF3Q5VWG9 929 aa17.94■□□□□ 0.46
BRAT1-201ENST00000340611 PDCL2Q8N4E4 241 aa17.94■□□□□ 0.46
BRAT1-201ENST00000340611 CNBD1Q8NA66 436 aa17.94■□□□□ 0.46
BRAT1-201ENST00000340611 LAMB2P55268 1798 aa17.93■□□□□ 0.46
BRAT1-201ENST00000340611 CARMIL3Q8ND23 1372 aa17.93■□□□□ 0.46
BRAT1-201ENST00000340611 PRR5LQ6MZQ0 368 aa17.93■□□□□ 0.46
BRAT1-201ENST00000340611 CHMP4CQ96CF2 233 aa17.93■□□□□ 0.46
BRAT1-201ENST00000340611 FAM227BQ96M60 508 aa17.93■□□□□ 0.46
BRAT1-201ENST00000340611 CYP2E1P05181 493 aaPredicted RBP17.93■□□□□ 0.46
BRAT1-201ENST00000340611 VGLL2Q8N8G2 317 aa17.93■□□□□ 0.46
BRAT1-201ENST00000340611 NLRP3Q96P20 1036 aa17.93■□□□□ 0.46
BRAT1-201ENST00000340611 ESYT1Q9BSJ8 1104 aa17.93■□□□□ 0.46
BRAT1-201ENST00000340611 USP26Q9BXU7 913 aa17.93■□□□□ 0.46
BRAT1-201ENST00000340611 TNRC6CQ9HCJ0 1690 aaKnown RBP17.93■□□□□ 0.46
BRAT1-201ENST00000340611 SERPINB2P05120 415 aa17.92■□□□□ 0.46
BRAT1-201ENST00000340611 FSD1Q9BTV5 496 aa17.92■□□□□ 0.46
BRAT1-201ENST00000340611 ANO2Q9NQ90 1003 aa17.92■□□□□ 0.46
BRAT1-201ENST00000340611 NSFL1CQ9UNZ2 370 aaKnown RBP17.92■□□□□ 0.46
BRAT1-201ENST00000340611 GOLIM4O00461 696 aa17.92■□□□□ 0.46
BRAT1-201ENST00000340611 ADRA2BP18089 450 aa17.92■□□□□ 0.46
BRAT1-201ENST00000340611 FKBP4Q02790 459 aaKnown RBP eCLIP17.92■□□□□ 0.46
BRAT1-201ENST00000340611 ILDR1Q86SU0 546 aaPredicted RBP17.92■□□□□ 0.46
BRAT1-201ENST00000340611 NYXQ9GZU5 481 aa17.92■□□□□ 0.46
BRAT1-201ENST00000340611 SYCE3A1L190 88 aa17.92■□□□□ 0.46
BRAT1-201ENST00000340611 PDE8BO95263 885 aa17.92■□□□□ 0.46
BRAT1-201ENST00000340611 IGHMBP2P38935 993 aaKnown RBP17.92■□□□□ 0.46
BRAT1-201ENST00000340611 CASC1Q6TDU7 716 aa17.92■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms