RNA–Protein interactions for RNA: ENST00000340019.4

TMC1-202, Transcript of transmembrane channel like 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene TMC1, Length 3,068 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMC1-202ENST00000340019 PHKA1P46020 1223 aa9.53□□□□□ -0.88
TMC1-202ENST00000340019 SCARF1Q14162 830 aa9.53□□□□□ -0.88
TMC1-202ENST00000340019 TTC39AQ5SRH9 613 aa9.53□□□□□ -0.88
TMC1-202ENST00000340019 GORABQ5T7V8 394 aa9.53□□□□□ -0.88
TMC1-202ENST00000340019 PODXL2Q9NZ53 605 aa9.53□□□□□ -0.88
TMC1-202ENST00000340019 LEMD3Q9Y2U8 911 aa9.53□□□□□ -0.88
TMC1-202ENST00000340019 ZNF804BA4D1E1 1349 aa9.53□□□□□ -0.88
TMC1-202ENST00000340019 PRKCSHP14314 528 aaPredicted RBP9.53□□□□□ -0.88
TMC1-202ENST00000340019 POLD1P28340 1107 aa9.53□□□□□ -0.88
TMC1-202ENST00000340019 PTGER2P43116 358 aa9.53□□□□□ -0.88
TMC1-202ENST00000340019 GPSM2P81274 684 aa9.53□□□□□ -0.88
TMC1-202ENST00000340019 MCAMP43121 646 aa9.52□□□□□ -0.88
TMC1-202ENST00000340019 NDUFB9Q9Y6M9 179 aa9.52□□□□□ -0.88
TMC1-202ENST00000340019 DUOX1Q9NRD9 1551 aa9.52□□□□□ -0.89
TMC1-202ENST00000340019 BRCA1P38398 1863 aaKnown RBP9.52□□□□□ -0.89
TMC1-202ENST00000340019 ZBTB22O15209 634 aa9.52□□□□□ -0.89
TMC1-202ENST00000340019 KCNA3P22001 575 aa9.52□□□□□ -0.89
TMC1-202ENST00000340019 CHMLP26374 656 aa9.52□□□□□ -0.89
TMC1-202ENST00000340019 KLRK1P26718 216 aa9.52□□□□□ -0.89
TMC1-202ENST00000340019 BCAMP50895 628 aa9.52□□□□□ -0.89
TMC1-202ENST00000340019 ZNF622Q969S3 477 aaKnown RBP eCLIP9.52□□□□□ -0.89
TMC1-202ENST00000340019 EDC3Q96F86 508 aaKnown RBP9.52□□□□□ -0.89
TMC1-202ENST00000340019 ANKIB1Q9P2G1 1089 aa9.52□□□□□ -0.89
TMC1-202ENST00000340019 UQCRFS1P1P0C7P4 283 aa9.52□□□□□ -0.89
TMC1-202ENST00000340019 PRPF40BQ6NWY9 871 aaKnown RBP9.52□□□□□ -0.89
TMC1-202ENST00000340019 C15orf52Q6ZUT6 534 aaKnown RBP9.52□□□□□ -0.89
TMC1-202ENST00000340019 FBXO33Q7Z6M2 555 aa9.52□□□□□ -0.89
TMC1-202ENST00000340019 FAM84BQ96KN1 310 aaPredicted RBP9.52□□□□□ -0.89
TMC1-202ENST00000340019 DNAJC2Q99543 621 aaKnown RBP9.52□□□□□ -0.89
TMC1-202ENST00000340019 PAG1Q9NWQ8 432 aa9.52□□□□□ -0.89
TMC1-202ENST00000340019 MYH13Q9UKX3 1938 aa9.51□□□□□ -0.89
TMC1-202ENST00000340019 SNED1Q8TER0 1413 aa9.51□□□□□ -0.89
TMC1-202ENST00000340019 RFX7Q2KHR2 1363 aa9.51□□□□□ -0.89
TMC1-202ENST00000340019 KCNJ4P48050 445 aa9.51□□□□□ -0.89
TMC1-202ENST00000340019 C7orf43Q8WVR3 580 aa9.51□□□□□ -0.89
TMC1-202ENST00000340019 CNKSR1Q969H4 720 aa9.51□□□□□ -0.89
TMC1-202ENST00000340019 NSFL1CQ9UNZ2 370 aaKnown RBP9.51□□□□□ -0.89
TMC1-202ENST00000340019 MYO5AQ9Y4I1 1855 aaKnown RBP9.51□□□□□ -0.89
TMC1-202ENST00000340019 DOCK2Q92608 1830 aa9.51□□□□□ -0.89
TMC1-202ENST00000340019 MYH7P12883 1935 aa9.51□□□□□ -0.89
TMC1-202ENST00000340019 ATP2B4P23634 1241 aa9.51□□□□□ -0.89
TMC1-202ENST00000340019 GYG1P46976 350 aa9.51□□□□□ -0.89
TMC1-202ENST00000340019 TGFB2P61812 414 aa9.51□□□□□ -0.89
TMC1-202ENST00000340019 RASGRF1Q13972 1273 aa9.51□□□□□ -0.89
TMC1-202ENST00000340019 TXNRD3Q86VQ6 643 aa9.51□□□□□ -0.89
TMC1-202ENST00000340019 TICAM2Q86XR7 235 aa9.51□□□□□ -0.89
TMC1-202ENST00000340019 GOLIM4O00461 696 aa9.5□□□□□ -0.89
TMC1-202ENST00000340019 ZAP70P43403 619 aa9.5□□□□□ -0.89
TMC1-202ENST00000340019 CAVIN4Q5BKX8 364 aa9.5□□□□□ -0.89
TMC1-202ENST00000340019 CASC1Q6TDU7 716 aa9.5□□□□□ -0.89
TMC1-202ENST00000340019 OLFM4Q6UX06 510 aa9.5□□□□□ -0.89
TMC1-202ENST00000340019 PI16Q6UXB8 463 aa9.5□□□□□ -0.89
TMC1-202ENST00000340019 KBTBD3Q8NAB2 608 aa9.5□□□□□ -0.89
TMC1-202ENST00000340019 TBC1D16Q8TBP0 767 aa9.5□□□□□ -0.89
TMC1-202ENST00000340019 ANTXR1Q9H6X2 564 aa9.5□□□□□ -0.89
TMC1-202ENST00000340019 HMG20BQ9P0W2 317 aa9.5□□□□□ -0.89
TMC1-202ENST00000340019 POLLQ9UGP5 575 aa9.5□□□□□ -0.89
TMC1-202ENST00000340019 DPEP1P16444 411 aa9.5□□□□□ -0.89
TMC1-202ENST00000340019 FKBP4Q02790 459 aaKnown RBP eCLIP9.5□□□□□ -0.89
TMC1-202ENST00000340019 SPATA5Q8NB90 893 aa9.5□□□□□ -0.89
TMC1-202ENST00000340019 GGA1Q9UJY5 639 aa9.5□□□□□ -0.89
TMC1-202ENST00000340019 COL1A1P02452 1464 aaPredicted RBP9.5□□□□□ -0.89
TMC1-202ENST00000340019 UFL1O94874 794 aa9.5□□□□□ -0.89
TMC1-202ENST00000340019 CYP2E1P05181 493 aaPredicted RBP9.5□□□□□ -0.89
TMC1-202ENST00000340019 FSD1Q9BTV5 496 aa9.5□□□□□ -0.89
TMC1-202ENST00000340019 SNRKQ9NRH2 765 aa9.5□□□□□ -0.89
TMC1-202ENST00000340019 MED23Q9ULK4 1368 aa9.49□□□□□ -0.89
TMC1-202ENST00000340019 A0A0G2JLW4 131 aa9.49□□□□□ -0.89
TMC1-202ENST00000340019 HIBADHP31937 336 aaKnown RBP9.49□□□□□ -0.89
TMC1-202ENST00000340019 ESYT1Q9BSJ8 1104 aa9.49□□□□□ -0.89
TMC1-202ENST00000340019 IL25Q9H293 177 aa9.49□□□□□ -0.89
TMC1-202ENST00000340019 CD2APQ9Y5K6 639 aa9.49□□□□□ -0.89
TMC1-202ENST00000340019 HIP1O00291 1037 aa9.49□□□□□ -0.89
TMC1-202ENST00000340019 SEMA3EO15041 775 aa9.49□□□□□ -0.89
TMC1-202ENST00000340019 MPNDQ8N594 471 aa9.49□□□□□ -0.89
TMC1-202ENST00000340019 GNL3LQ9NVN8 582 aaKnown RBP9.49□□□□□ -0.89
TMC1-202ENST00000340019 PDS5AQ29RF7 1337 aaKnown RBP9.48□□□□□ -0.89
TMC1-202ENST00000340019 TTLL6Q8N841 843 aa9.48□□□□□ -0.89
TMC1-202ENST00000340019 GPR101Q96P66 508 aaPredicted RBP9.48□□□□□ -0.89
TMC1-202ENST00000340019 EIF5BO60841 1220 aaKnown RBP9.48□□□□□ -0.89
TMC1-202ENST00000340019 MFAP1P55081 439 aaKnown RBP9.48□□□□□ -0.89
TMC1-202ENST00000340019 TTF1Q15361 905 aaPredicted RBP9.48□□□□□ -0.89
TMC1-202ENST00000340019 VPS37DQ86XT2 251 aa9.48□□□□□ -0.89
TMC1-202ENST00000340019 RTFDC1Q9BY42 306 aaPredicted RBP9.48□□□□□ -0.89
TMC1-202ENST00000340019 RBM19Q9Y4C8 960 aaKnown RBP9.48□□□□□ -0.89
TMC1-202ENST00000340019 SGSM2O43147 1006 aa9.47□□□□□ -0.89
TMC1-202ENST00000340019 CHGBP05060 677 aa9.47□□□□□ -0.89
TMC1-202ENST00000340019 CC2D2BQ6DHV5 1058 aa9.47□□□□□ -0.89
TMC1-202ENST00000340019 CWC27Q6UX04 472 aaKnown RBP9.47□□□□□ -0.89
TMC1-202ENST00000340019 DPP8Q6V1X1 898 aaPredicted RBP9.47□□□□□ -0.89
TMC1-202ENST00000340019 FAM227BQ96M60 508 aa9.47□□□□□ -0.89
TMC1-202ENST00000340019 TMX4Q9H1E5 349 aaPredicted RBP9.47□□□□□ -0.89
TMC1-202ENST00000340019 PIH1D3Q9NQM4 214 aaKnown RBP9.47□□□□□ -0.89
TMC1-202ENST00000340019 DIAPH3Q9NSV4 1193 aa9.47□□□□□ -0.89
TMC1-202ENST00000340019 DENND2AQ9ULE3 1009 aa9.47□□□□□ -0.89
TMC1-202ENST00000340019 CHD4Q14839 1912 aa9.47□□□□□ -0.89
TMC1-202ENST00000340019 NMIQ13287 307 aaPredicted RBP9.47□□□□□ -0.89
TMC1-202ENST00000340019 TDRD7Q8NHU6 1098 aaKnown RBP9.47□□□□□ -0.89
TMC1-202ENST00000340019 IQSEC3Q9UPP2 1182 aaPredicted RBP9.47□□□□□ -0.89
TMC1-202ENST00000340019 A0A0D9SFI3 127 aa9.47□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms