RNA–Protein interactions for RNA: ENST00000338508.8

SHANK2-201, Transcript of SH3 and multiple ankyrin repeat domains 2, humanhuman

TSL 5 BASIC

Gene SHANK2, Length 7,271 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-201ENST00000338508 ANO6Q4KMQ2 910 aa13.33□□□□□ -0.28
SHANK2-201ENST00000338508 CCDC77Q9BR77 488 aa13.33□□□□□ -0.28
SHANK2-201ENST00000338508 SAP30BPQ9UHR5 308 aaKnown RBP13.33□□□□□ -0.28
SHANK2-201ENST00000338508 DAPK3O43293 454 aa13.33□□□□□ -0.28
SHANK2-201ENST00000338508 HSPA1LP34931 641 aa13.33□□□□□ -0.28
SHANK2-201ENST00000338508 KARSQ15046 597 aaKnown RBP13.33□□□□□ -0.28
SHANK2-201ENST00000338508 ANKS4BQ8N8V4 417 aa13.33□□□□□ -0.28
SHANK2-201ENST00000338508 DNAI1Q9UI46 699 aa13.33□□□□□ -0.28
SHANK2-201ENST00000338508 SYNJ2O15056 1496 aa13.33□□□□□ -0.28
SHANK2-201ENST00000338508 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP13.32□□□□□ -0.28
SHANK2-201ENST00000338508 PI4KAP2A4QPH2 592 aa13.32□□□□□ -0.28
SHANK2-201ENST00000338508 RXRAP19793 462 aa13.32□□□□□ -0.28
SHANK2-201ENST00000338508 CCDC14Q49A88 953 aa13.32□□□□□ -0.28
SHANK2-201ENST00000338508 C20orf194Q5TEA3 1177 aa13.32□□□□□ -0.28
SHANK2-201ENST00000338508 PI4KAP1Q8N8J0 262 aa13.32□□□□□ -0.28
SHANK2-201ENST00000338508 CFTRP13569 1480 aa13.32□□□□□ -0.28
SHANK2-201ENST00000338508 SF3A3Q12874 501 aaKnown RBP eCLIP13.32□□□□□ -0.286e-6■□□□□ 10.9
SHANK2-201ENST00000338508 CHMP2AO43633 222 aa13.32□□□□□ -0.28
SHANK2-201ENST00000338508 RNASE9P60153 205 aaKnown RBP13.32□□□□□ -0.28
SHANK2-201ENST00000338508 HCLS1P14317 486 aaPredicted RBP13.32□□□□□ -0.28
SHANK2-201ENST00000338508 ZYXQ15942 572 aaKnown RBP13.32□□□□□ -0.28
SHANK2-201ENST00000338508 FNBP4Q8N3X1 1017 aaPredicted RBP13.32□□□□□ -0.28
SHANK2-201ENST00000338508 UBLCP1Q8WVY7 318 aaPredicted RBP13.32□□□□□ -0.28
SHANK2-201ENST00000338508 FAM83GA6ND36 823 aa13.31□□□□□ -0.28
SHANK2-201ENST00000338508 CSPG5O95196 566 aa13.31□□□□□ -0.28
SHANK2-201ENST00000338508 UBXN1Q04323 297 aa13.31□□□□□ -0.28
SHANK2-201ENST00000338508 NOP9Q86U38 636 aaKnown RBP13.31□□□□□ -0.28
SHANK2-201ENST00000338508 AFG3L2Q9Y4W6 797 aa13.31□□□□□ -0.28
SHANK2-201ENST00000338508 LMOD1P29536 600 aaPredicted RBP13.31□□□□□ -0.28
SHANK2-201ENST00000338508 LRRC9Q6ZRR7 1453 aa13.31□□□□□ -0.28
SHANK2-201ENST00000338508 CCDC184Q52MB2 194 aa13.31□□□□□ -0.28
SHANK2-201ENST00000338508 TFCP2L1Q9NZI6 479 aa13.31□□□□□ -0.28
SHANK2-201ENST00000338508 NIP7Q9Y221 180 aaKnown RBP eCLIP13.31□□□□□ -0.28
SHANK2-201ENST00000338508 MICALL1Q8N3F8 863 aa13.31□□□□□ -0.28
SHANK2-201ENST00000338508 AOPEPQ8N6M6 819 aa13.31□□□□□ -0.28
SHANK2-201ENST00000338508 EHBP1Q8NDI1 1231 aa13.31□□□□□ -0.28
SHANK2-201ENST00000338508 PRPF31Q8WWY3 499 aaKnown RBP13.31□□□□□ -0.28
SHANK2-201ENST00000338508 BRF1Q92994 677 aa13.31□□□□□ -0.28
SHANK2-201ENST00000338508 PYM1Q9BRP8 204 aaKnown RBP13.31□□□□□ -0.28
SHANK2-201ENST00000338508 GUCA1BQ9UMX6 200 aa13.31□□□□□ -0.28
SHANK2-201ENST00000338508 CCDC129Q6ZRS4 1044 aa13.31□□□□□ -0.28
SHANK2-201ENST00000338508 ECHDC1Q9NTX5 307 aa13.31□□□□□ -0.28
SHANK2-201ENST00000338508 CNPY2Q9Y2B0 182 aa13.31□□□□□ -0.28
SHANK2-201ENST00000338508 CEBPAP49715 358 aaPredicted RBP13.31□□□□□ -0.28
SHANK2-201ENST00000338508 KMT5BQ4FZB7 885 aa13.31□□□□□ -0.28
SHANK2-201ENST00000338508 VPS52Q8N1B4 723 aa13.31□□□□□ -0.28
SHANK2-201ENST00000338508 HELBQ8NG08 1087 aaPredicted RBP13.31□□□□□ -0.28
SHANK2-201ENST00000338508 MAGEB6P1A0A0J9YX57 407 aa13.3□□□□□ -0.28
SHANK2-201ENST00000338508 BIRC3Q13489 604 aa13.3□□□□□ -0.28
SHANK2-201ENST00000338508 ANO3Q9BYT9 981 aa13.3□□□□□ -0.28
SHANK2-201ENST00000338508 Q6ZUG5 572 aa13.3□□□□□ -0.28
SHANK2-201ENST00000338508 KRT23Q9C075 422 aa13.3□□□□□ -0.28
SHANK2-201ENST00000338508 ESR2Q92731 530 aa13.3□□□□□ -0.28
SHANK2-201ENST00000338508 ZKSCAN3Q9BRR0 538 aa13.3□□□□□ -0.28
SHANK2-201ENST00000338508 CTAGE9A4FU28 777 aa13.3□□□□□ -0.28
SHANK2-201ENST00000338508 RHOXF2BP0C7M4 288 aa13.3□□□□□ -0.28
SHANK2-201ENST00000338508 NEK11Q8NG66 645 aa13.3□□□□□ -0.28
SHANK2-201ENST00000338508 RRP36Q96EU6 259 aaKnown RBP13.3□□□□□ -0.28
SHANK2-201ENST00000338508 RHOXF2Q9BQY4 288 aa13.3□□□□□ -0.28
SHANK2-201ENST00000338508 TRIM6Q9C030 488 aaPredicted RBP13.3□□□□□ -0.28
SHANK2-201ENST00000338508 CTAGE15A4D2H0 777 aa13.3□□□□□ -0.28
SHANK2-201ENST00000338508 GOLGA6L9A6NEM1 432 aa13.3□□□□□ -0.28
SHANK2-201ENST00000338508 CTAGE8P0CG41 777 aa13.3□□□□□ -0.28
SHANK2-201ENST00000338508 CTAGE6Q86UF2 777 aa13.3□□□□□ -0.28
SHANK2-201ENST00000338508 GPIHBP1Q8IV16 184 aa13.3□□□□□ -0.28
SHANK2-201ENST00000338508 CTAGE4Q8IX94 777 aa13.3□□□□□ -0.28
SHANK2-201ENST00000338508 LZTFL1Q9NQ48 299 aa13.3□□□□□ -0.28
SHANK2-201ENST00000338508 EIF6P56537 245 aaKnown RBP13.3□□□□□ -0.28
SHANK2-201ENST00000338508 CPLX4Q7Z7G2 160 aa13.3□□□□□ -0.28
SHANK2-201ENST00000338508 JDP2Q8WYK2 163 aa13.3□□□□□ -0.28
SHANK2-201ENST00000338508 NSFL1CQ9UNZ2 370 aaKnown RBP13.3□□□□□ -0.28
SHANK2-201ENST00000338508 CCDC169A6NNP5 214 aa13.29□□□□□ -0.28
SHANK2-201ENST00000338508 TACC1O75410 805 aa13.29□□□□□ -0.28
SHANK2-201ENST00000338508 KIF5AQ12840 1032 aa13.29□□□□□ -0.28
SHANK2-201ENST00000338508 SLC39A6Q13433 755 aa13.29□□□□□ -0.28
SHANK2-201ENST00000338508 DIXDC1Q155Q3 683 aa13.29□□□□□ -0.28
SHANK2-201ENST00000338508 MCM9Q9NXL9 1143 aa13.29□□□□□ -0.28
SHANK2-201ENST00000338508 DDX39AO00148 427 aaKnown RBP13.29□□□□□ -0.28
SHANK2-201ENST00000338508 SLFN5Q08AF3 891 aa13.29□□□□□ -0.28
SHANK2-201ENST00000338508 ZNF804AQ7Z570 1209 aa13.29□□□□□ -0.28
SHANK2-201ENST00000338508 MAGEB6Q8N7X4 407 aa13.29□□□□□ -0.28
SHANK2-201ENST00000338508 PSMA7O14818 248 aa13.29□□□□□ -0.28
SHANK2-201ENST00000338508 TBC1D9Q6ZT07 1266 aa13.29□□□□□ -0.28
SHANK2-201ENST00000338508 PHF8Q9UPP1 1060 aa13.29□□□□□ -0.28
SHANK2-201ENST00000338508 ATP2A2P16615 1042 aaKnown RBP13.29□□□□□ -0.28
SHANK2-201ENST00000338508 NLRP3Q96P20 1036 aa13.29□□□□□ -0.28
SHANK2-201ENST00000338508 TACC3Q9Y6A5 838 aa13.29□□□□□ -0.28
SHANK2-201ENST00000338508 LEO1Q8WVC0 666 aaPredicted RBP13.29□□□□□ -0.28
SHANK2-201ENST00000338508 ZC3H12CQ9C0D7 883 aaKnown RBP13.29□□□□□ -0.28
SHANK2-201ENST00000338508 GPHNQ9NQX3 736 aaPredicted RBP13.29□□□□□ -0.28
SHANK2-201ENST00000338508 SLC52A1Q9NWF4 448 aa13.29□□□□□ -0.28
SHANK2-201ENST00000338508 ATAD2Q6PL18 1390 aa13.29□□□□□ -0.28
SHANK2-201ENST00000338508 FBLN1P23142 703 aa13.28□□□□□ -0.28
SHANK2-201ENST00000338508 GTF2A1P52655 376 aaPredicted RBP13.28□□□□□ -0.28
SHANK2-201ENST00000338508 CCDC121Q6ZUS5 278 aa13.28□□□□□ -0.28
SHANK2-201ENST00000338508 TBC1D31Q96DN5 1066 aa13.28□□□□□ -0.28
SHANK2-201ENST00000338508 AMOTL2Q9Y2J4 779 aa13.28□□□□□ -0.28
SHANK2-201ENST00000338508 PARP3Q9Y6F1 533 aa13.28□□□□□ -0.28
SHANK2-201ENST00000338508 KIF21BO75037 1637 aa13.28□□□□□ -0.28
SHANK2-201ENST00000338508 GRIN2BQ13224 1484 aa13.28□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms