RNA–Protein interactions for RNA: ENST00000338145.7

UBE2D3-202, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene UBE2D3, Length 896 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-202ENST00000338145 PDE6BP35913 854 aa12.66□□□□□ -0.38
UBE2D3-202ENST00000338145 ZNF598Q86UK7 904 aaKnown RBP12.66□□□□□ -0.38
UBE2D3-202ENST00000338145 DNAJC10Q8IXB1 793 aa12.66□□□□□ -0.38
UBE2D3-202ENST00000338145 DLEC1Q9Y238 1755 aa12.66□□□□□ -0.38
UBE2D3-202ENST00000338145 LTBP3Q9NS15 1303 aa12.65□□□□□ -0.38
UBE2D3-202ENST00000338145 ADAMTS7Q9UKP4 1686 aa12.65□□□□□ -0.38
UBE2D3-202ENST00000338145 LDHDQ86WU2 507 aa12.65□□□□□ -0.38
UBE2D3-202ENST00000338145 COL15A1P39059 1388 aa12.65□□□□□ -0.38
UBE2D3-202ENST00000338145 TJP1Q07157 1748 aa12.65□□□□□ -0.38
UBE2D3-202ENST00000338145 TNNT2P45379 298 aaPredicted RBP12.64□□□□□ -0.39
UBE2D3-202ENST00000338145 AKAP4Q5JQC9 854 aa12.64□□□□□ -0.39
UBE2D3-202ENST00000338145 SOGA3Q5TF21 947 aa12.64□□□□□ -0.39
UBE2D3-202ENST00000338145 MTMR14Q8NCE2 650 aa12.64□□□□□ -0.39
UBE2D3-202ENST00000338145 BRIP1Q9BX63 1249 aa12.64□□□□□ -0.39
UBE2D3-202ENST00000338145 TAOK3Q9H2K8 898 aa12.64□□□□□ -0.39
UBE2D3-202ENST00000338145 SLC52A2Q9HAB3 445 aa12.64□□□□□ -0.39
UBE2D3-202ENST00000338145 HMX1Q9NP08 348 aaPredicted RBP12.64□□□□□ -0.39
UBE2D3-202ENST00000338145 PASKQ96RG2 1323 aa12.63□□□□□ -0.39
UBE2D3-202ENST00000338145 CCDC88AQ3V6T2 1871 aa12.63□□□□□ -0.39
UBE2D3-202ENST00000338145 AFDNP55196 1824 aaKnown RBP12.63□□□□□ -0.39
UBE2D3-202ENST00000338145 A0A087WZG4 1122 aa12.63□□□□□ -0.39
UBE2D3-202ENST00000338145 TMEM88BA6NKF7 163 aa12.63□□□□□ -0.39
UBE2D3-202ENST00000338145 C21orf2O43822 256 aa12.63□□□□□ -0.39
UBE2D3-202ENST00000338145 MCM6Q14566 821 aa12.63□□□□□ -0.39
UBE2D3-202ENST00000338145 ZNF622Q969S3 477 aaKnown RBP eCLIP12.63□□□□□ -0.39
UBE2D3-202ENST00000338145 DDNO94850 711 aaPredicted RBP12.62□□□□□ -0.39
UBE2D3-202ENST00000338145 VEGFBP49765 207 aa12.62□□□□□ -0.39
UBE2D3-202ENST00000338145 NR6A1Q15406 480 aa12.62□□□□□ -0.39
UBE2D3-202ENST00000338145 CNKSR1Q969H4 720 aa12.62□□□□□ -0.39
UBE2D3-202ENST00000338145 TRIM34Q9BYJ4 488 aa12.62□□□□□ -0.39
UBE2D3-202ENST00000338145 PRM3Q9NNZ6 103 aa12.62□□□□□ -0.39
UBE2D3-202ENST00000338145 FKBPLQ9UIM3 349 aa12.62□□□□□ -0.39
UBE2D3-202ENST00000338145 ZBTB1Q9Y2K1 713 aa12.62□□□□□ -0.39
UBE2D3-202ENST00000338145 DICER1Q9UPY3 1922 aaKnown RBP12.61□□□□□ -0.39
UBE2D3-202ENST00000338145 LBX1P52954 281 aa12.61□□□□□ -0.39
UBE2D3-202ENST00000338145 MAP2K1Q02750 393 aaPredicted RBP12.61□□□□□ -0.39
UBE2D3-202ENST00000338145 SULT6B1Q6IMI4 303 aa12.61□□□□□ -0.39
UBE2D3-202ENST00000338145 SNRKQ9NRH2 765 aa12.61□□□□□ -0.39
UBE2D3-202ENST00000338145 STARD3NLO95772 234 aa12.6□□□□□ -0.39
UBE2D3-202ENST00000338145 ZNF697Q5TEC3 545 aa12.6□□□□□ -0.39
UBE2D3-202ENST00000338145 AEBP1Q8IUX7 1158 aa12.6□□□□□ -0.39
UBE2D3-202ENST00000338145 ZNF511Q8NB15 262 aa12.6□□□□□ -0.39
UBE2D3-202ENST00000338145 ABHD8Q96I13 439 aa12.6□□□□□ -0.39
UBE2D3-202ENST00000338145 CARMIL3Q8ND23 1372 aa12.59□□□□□ -0.39
UBE2D3-202ENST00000338145 RASSF10A6NK89 507 aa12.59□□□□□ -0.39
UBE2D3-202ENST00000338145 EIF5P55010 431 aaKnown RBP12.59□□□□□ -0.39
UBE2D3-202ENST00000338145 STYK1Q6J9G0 422 aa12.59□□□□□ -0.39
UBE2D3-202ENST00000338145 BICDL1Q6ZP65 573 aa12.59□□□□□ -0.39
UBE2D3-202ENST00000338145 PCGF6Q9BYE7 350 aa12.59□□□□□ -0.39
UBE2D3-202ENST00000338145 TAF1DQ9H5J8 278 aaPredicted RBP12.59□□□□□ -0.39
UBE2D3-202ENST00000338145 GPSM3Q9Y4H4 160 aa12.59□□□□□ -0.39
UBE2D3-202ENST00000338145 NDUFB9Q9Y6M9 179 aa12.59□□□□□ -0.39
UBE2D3-202ENST00000338145 FER1L6Q2WGJ9 1857 aa12.59□□□□□ -0.39
UBE2D3-202ENST00000338145 CLSPNQ9HAW4 1339 aa12.59□□□□□ -0.39
UBE2D3-202ENST00000338145 SCN11AQ9UI33 1791 aa12.58□□□□□ -0.39
UBE2D3-202ENST00000338145 CANXP27824 592 aaKnown RBP12.58□□□□□ -0.4
UBE2D3-202ENST00000338145 MLLT1Q03111 559 aaPredicted RBP12.58□□□□□ -0.4
UBE2D3-202ENST00000338145 DEFB115Q30KQ5 88 aa12.58□□□□□ -0.4
UBE2D3-202ENST00000338145 PDXDC2PQ6P474 469 aa12.58□□□□□ -0.4
UBE2D3-202ENST00000338145 PNMA8AQ86V59 439 aaPredicted RBP12.58□□□□□ -0.4
UBE2D3-202ENST00000338145 BAP1Q92560 729 aa12.58□□□□□ -0.4
UBE2D3-202ENST00000338145 SCN4AP35499 1836 aa12.58□□□□□ -0.4
UBE2D3-202ENST00000338145 WNT7AO00755 349 aa12.57□□□□□ -0.4
UBE2D3-202ENST00000338145 NPHP1O15259 732 aa12.57□□□□□ -0.4
UBE2D3-202ENST00000338145 RNMTO43148 476 aaKnown RBP12.57□□□□□ -0.4
UBE2D3-202ENST00000338145 HSPA8P11142 646 aaKnown RBP12.57□□□□□ -0.4
UBE2D3-202ENST00000338145 RGS19P49795 217 aa12.57□□□□□ -0.4
UBE2D3-202ENST00000338145 ST5P78524 1137 aa12.57□□□□□ -0.4
UBE2D3-202ENST00000338145 SLC39A6Q13433 755 aa12.57□□□□□ -0.4
UBE2D3-202ENST00000338145 TBC1D9BQ66K14 1250 aa12.57□□□□□ -0.4
UBE2D3-202ENST00000338145 PRR5LQ6MZQ0 368 aa12.57□□□□□ -0.4
UBE2D3-202ENST00000338145 MASTLQ96GX5 879 aa12.57□□□□□ -0.4
UBE2D3-202ENST00000338145 TEX13AQ9BXU3 409 aaPredicted RBP12.57□□□□□ -0.4
UBE2D3-202ENST00000338145 LGR6Q9HBX8 967 aa12.57□□□□□ -0.4
UBE2D3-202ENST00000338145 HACL1Q9UJ83 578 aa12.57□□□□□ -0.4
UBE2D3-202ENST00000338145 MRC1P22897 1456 aa12.57□□□□□ -0.4
UBE2D3-202ENST00000338145 SRGNP10124 158 aa12.56□□□□□ -0.4
UBE2D3-202ENST00000338145 SH3BP2P78314 561 aa12.56□□□□□ -0.4
UBE2D3-202ENST00000338145 PRR20EP86478 221 aa12.56□□□□□ -0.4
UBE2D3-202ENST00000338145 PRR20CP86479 221 aa12.56□□□□□ -0.4
UBE2D3-202ENST00000338145 PRR20DP86480 221 aa12.56□□□□□ -0.4
UBE2D3-202ENST00000338145 PRR20BP86481 221 aa12.56□□□□□ -0.4
UBE2D3-202ENST00000338145 PRR20AP86496 221 aa12.56□□□□□ -0.4
UBE2D3-202ENST00000338145 EAPPQ56P03 285 aaPredicted RBP12.56□□□□□ -0.4
UBE2D3-202ENST00000338145 PRPF40BQ6NWY9 871 aaKnown RBP12.56□□□□□ -0.4
UBE2D3-202ENST00000338145 NPM2Q86SE8 214 aaKnown RBP12.56□□□□□ -0.4
UBE2D3-202ENST00000338145 TTC5Q8N0Z6 440 aa12.56□□□□□ -0.4
UBE2D3-202ENST00000338145 SETDB2Q96T68 719 aa12.56□□□□□ -0.4
UBE2D3-202ENST00000338145 IL13P35225 146 aa12.55□□□□□ -0.4
UBE2D3-202ENST00000338145 SKOR1P84550 965 aa12.55□□□□□ -0.4
UBE2D3-202ENST00000338145 CCDC93Q567U6 631 aa12.55□□□□□ -0.4
UBE2D3-202ENST00000338145 MORC1Q86VD1 984 aa12.55□□□□□ -0.4
UBE2D3-202ENST00000338145 BPHLQ86WA6 291 aaPredicted RBP12.55□□□□□ -0.4
UBE2D3-202ENST00000338145 CNBD1Q8NA66 436 aa12.55□□□□□ -0.4
UBE2D3-202ENST00000338145 EPS8L1Q8TE68 723 aa12.55□□□□□ -0.4
UBE2D3-202ENST00000338145 WDR33Q9C0J8 1336 aaKnown RBP12.55□□□□□ -0.4
UBE2D3-202ENST00000338145 VIRMAQ69YN4 1812 aaKnown RBP12.55□□□□□ -0.4
UBE2D3-202ENST00000338145 EPHX2P34913 555 aa12.54□□□□□ -0.4
UBE2D3-202ENST00000338145 IL6STP40189 918 aaPredicted RBP12.54□□□□□ -0.4
UBE2D3-202ENST00000338145 SH3BP5LQ7L8J4 393 aa12.54□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms