RNA–Protein interactions for RNA: ENST00000337526.10

RTN4-202, Transcript of reticulon 4, humanhuman

TSL 1 (best) BASIC

Gene RTN4, Length 4,790 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-202ENST00000337526 RNF187Q5TA31 235 aaPredicted RBP15.71■□□□□ 0.11
RTN4-202ENST00000337526 C6orf229H3BNL8 230 aa15.71■□□□□ 0.1
RTN4-202ENST00000337526 SPTY2D1Q68D10 685 aaPredicted RBP15.71■□□□□ 0.1
RTN4-202ENST00000337526 MAP3K5Q99683 1374 aa15.71■□□□□ 0.1
RTN4-202ENST00000337526 CHL1O00533 1208 aa15.7■□□□□ 0.1
RTN4-202ENST00000337526 CCDC175P0C221 793 aa15.7■□□□□ 0.1
RTN4-202ENST00000337526 CETN1Q12798 172 aa15.7■□□□□ 0.1
RTN4-202ENST00000337526 CCDC152Q4G0S7 254 aa15.7■□□□□ 0.1
RTN4-202ENST00000337526 CUL5Q93034 780 aa15.7■□□□□ 0.1
RTN4-202ENST00000337526 EXOC1Q9NV70 894 aa15.7■□□□□ 0.1
RTN4-202ENST00000337526 STAT6P42226 847 aa15.7■□□□□ 0.1
RTN4-202ENST00000337526 CADPS2Q86UW7 1296 aa15.7■□□□□ 0.1
RTN4-202ENST00000337526 DHX58Q96C10 678 aa15.7■□□□□ 0.1
RTN4-202ENST00000337526 ZNF445P59923 1031 aa15.7■□□□□ 0.1
RTN4-202ENST00000337526 PRPF4BQ13523 1007 aaKnown RBP15.7■□□□□ 0.1
RTN4-202ENST00000337526 FAM173BQ6P4H8 233 aa15.7■□□□□ 0.1
RTN4-202ENST00000337526 RIMS2Q9UQ26 1411 aa15.7■□□□□ 0.1
RTN4-202ENST00000337526 PSMA7O14818 248 aa15.7■□□□□ 0.1
RTN4-202ENST00000337526 IL13P35225 146 aa15.7■□□□□ 0.1
RTN4-202ENST00000337526 PIP4K2BP78356 416 aa15.7■□□□□ 0.1
RTN4-202ENST00000337526 BRAPQ7Z569 592 aa15.7■□□□□ 0.1
RTN4-202ENST00000337526 BICC1Q9H694 974 aaKnown RBP15.7■□□□□ 0.1
RTN4-202ENST00000337526 SBNO2Q9Y2G9 1366 aa15.7■□□□□ 0.1
RTN4-202ENST00000337526 MACROD2A1Z1Q3 448 aa15.69■□□□□ 0.1
RTN4-202ENST00000337526 MICALCLQ6ZW33 695 aa15.69■□□□□ 0.1
RTN4-202ENST00000337526 RPGRQ92834 1020 aaKnown RBP15.69■□□□□ 0.1
RTN4-202ENST00000337526 DDX21Q9NR30 783 aaKnown RBP eCLIP15.69■□□□□ 0.14e-6■■■■□ 21
RTN4-202ENST00000337526 INSRP06213 1382 aa15.69■□□□□ 0.1
RTN4-202ENST00000337526 SGSM2O43147 1006 aa15.69■□□□□ 0.1
RTN4-202ENST00000337526 A0A1B0GVL5 298 aa15.68■□□□□ 0.1
RTN4-202ENST00000337526 TIGD1Q96MW7 591 aa15.68■□□□□ 0.1
RTN4-202ENST00000337526 SPAG5Q96R06 1193 aa15.68■□□□□ 0.1
RTN4-202ENST00000337526 LRRC27Q9C0I9 530 aa15.68■□□□□ 0.1
RTN4-202ENST00000337526 DESP17661 470 aa15.68■□□□□ 0.1
RTN4-202ENST00000337526 CKAP4Q07065 602 aaKnown RBP15.68■□□□□ 0.1
RTN4-202ENST00000337526 ATL3Q6DD88 541 aa15.68■□□□□ 0.1
RTN4-202ENST00000337526 SYT10Q6XYQ8 523 aa15.68■□□□□ 0.1
RTN4-202ENST00000337526 MAATS1Q7Z4T9 603 aa15.68■□□□□ 0.1
RTN4-202ENST00000337526 CTNNBL1Q8WYA6 563 aaPredicted RBP15.68■□□□□ 0.1
RTN4-202ENST00000337526 SNX14Q9Y5W7 946 aa15.68■□□□□ 0.1
RTN4-202ENST00000337526 SHANK2Q9UPX8 1470 aa15.68■□□□□ 0.1
RTN4-202ENST00000337526 IBSPP21815 317 aaPredicted RBP15.67■□□□□ 0.1
RTN4-202ENST00000337526 STX17P56962 302 aa15.67■□□□□ 0.1
RTN4-202ENST00000337526 FAM160A1Q05DH4 1040 aa15.67■□□□□ 0.1
RTN4-202ENST00000337526 CCDC94Q9BW85 323 aaPredicted RBP15.67■□□□□ 0.1
RTN4-202ENST00000337526 TAOK3Q9H2K8 898 aa15.67■□□□□ 0.1
RTN4-202ENST00000337526 DISP1Q96F81 1524 aa15.67■□□□□ 0.1
RTN4-202ENST00000337526 GNAQP50148 359 aa15.67■□□□□ 0.1
RTN4-202ENST00000337526 LMBRD1Q9NUN5 540 aa15.67■□□□□ 0.1
RTN4-202ENST00000337526 ABCC1P33527 1531 aa15.67■□□□□ 0.1
RTN4-202ENST00000337526 ZNF518AQ6AHZ1 1483 aa15.67■□□□□ 0.1
RTN4-202ENST00000337526 PNMA6EA0A0J9YXQ4 647 aa15.66■□□□□ 0.1
RTN4-202ENST00000337526 CTAGE9A4FU28 777 aa15.66■□□□□ 0.1
RTN4-202ENST00000337526 GCOM1H8Y6P7 765 aaPredicted RBP15.66■□□□□ 0.1
RTN4-202ENST00000337526 MYZAPP0CAP1 466 aa15.66■□□□□ 0.1
RTN4-202ENST00000337526 RPS6KB1P23443 525 aa15.66■□□□□ 0.1
RTN4-202ENST00000337526 NAA16Q6N069 864 aaPredicted RBP15.66■□□□□ 0.1
RTN4-202ENST00000337526 TRMT1LQ7Z2T5 733 aaKnown RBP15.66■□□□□ 0.1
RTN4-202ENST00000337526 CFAP43Q8NDM7 1665 aa15.66■□□□□ 0.1
RTN4-202ENST00000337526 TIMM10P62072 90 aa15.66■□□□□ 0.1
RTN4-202ENST00000337526 DRC1Q96MC2 740 aa15.66■□□□□ 0.1
RTN4-202ENST00000337526 BLMP54132 1417 aaPredicted RBP15.66■□□□□ 0.1
RTN4-202ENST00000337526 RXRAP19793 462 aa15.66■□□□□ 0.1
RTN4-202ENST00000337526 SMC1AQ14683 1233 aaKnown RBP15.66■□□□□ 0.1
RTN4-202ENST00000337526 CEP112Q8N8E3 955 aa15.66■□□□□ 0.1
RTN4-202ENST00000337526 GIMAP7Q8NHV1 300 aa15.66■□□□□ 0.1
RTN4-202ENST00000337526 GCP02774 474 aa15.66■□□□□ 0.1
RTN4-202ENST00000337526 TSPY3P0CV98 308 aa15.65■□□□□ 0.1
RTN4-202ENST00000337526 TSPY8P0CW00 308 aa15.65■□□□□ 0.1
RTN4-202ENST00000337526 HOXC9P31274 260 aa15.65■□□□□ 0.1
RTN4-202ENST00000337526 HELBQ8NG08 1087 aaPredicted RBP15.65■□□□□ 0.1
RTN4-202ENST00000337526 GOLGA1Q92805 767 aa15.65■□□□□ 0.1
RTN4-202ENST00000337526 LZTFL1Q9NQ48 299 aa15.65■□□□□ 0.1
RTN4-202ENST00000337526 IGSF3O75054 1194 aa15.65■□□□□ 0.1
RTN4-202ENST00000337526 ASIC1P78348 528 aa15.65■□□□□ 0.1
RTN4-202ENST00000337526 MYL5Q02045 173 aa15.65■□□□□ 0.1
RTN4-202ENST00000337526 UTP14AQ9BVJ6 771 aaKnown RBP15.65■□□□□ 0.1
RTN4-202ENST00000337526 KAT6BQ8WYB5 2073 aa15.65■□□□□ 0.1
RTN4-202ENST00000337526 SLC27A2O14975 620 aa15.65■□□□□ 0.1
RTN4-202ENST00000337526 KARSQ15046 597 aaKnown RBP15.65■□□□□ 0.1
RTN4-202ENST00000337526 INCENPQ9NQS7 918 aa15.64■□□□□ 0.09
RTN4-202ENST00000337526 GOLGA6L10A0A0M3HER8 536 aa15.64■□□□□ 0.09
RTN4-202ENST00000337526 KIF5AQ12840 1032 aa15.64■□□□□ 0.09
RTN4-202ENST00000337526 HEATR3Q7Z4Q2 680 aa15.64■□□□□ 0.09
RTN4-202ENST00000337526 YTHDC2Q9H6S0 1430 aaKnown RBP15.64■□□□□ 0.09
RTN4-202ENST00000337526 RNMTO43148 476 aaKnown RBP15.64■□□□□ 0.09
RTN4-202ENST00000337526 KRT86O43790 486 aa15.64■□□□□ 0.09
RTN4-202ENST00000337526 STXBP4Q6ZWJ1 553 aa15.64■□□□□ 0.09
RTN4-202ENST00000337526 MMRN2Q9H8L6 949 aa15.64■□□□□ 0.09
RTN4-202ENST00000337526 CTTNBP2Q8WZ74 1663 aa15.64■□□□□ 0.09
RTN4-202ENST00000337526 TACC1O75410 805 aa15.64■□□□□ 0.09
RTN4-202ENST00000337526 HMGB2P26583 209 aaKnown RBP15.64■□□□□ 0.09
RTN4-202ENST00000337526 IFI16Q16666 785 aaKnown RBP15.64■□□□□ 0.09
RTN4-202ENST00000337526 FAM227BQ96M60 508 aa15.64■□□□□ 0.09
RTN4-202ENST00000337526 HSF2BPO75031 334 aa15.63■□□□□ 0.09
RTN4-202ENST00000337526 CALML3P27482 149 aa15.63■□□□□ 0.09
RTN4-202ENST00000337526 KRI1Q8N9T8 703 aaKnown RBP15.63■□□□□ 0.09
RTN4-202ENST00000337526 ZFP91Q96JP5 570 aaPredicted RBP15.63■□□□□ 0.09
RTN4-202ENST00000337526 AOX1Q06278 1338 aa15.63■□□□□ 0.09
RTN4-202ENST00000337526 GADD45BO75293 160 aaPredicted RBP15.63■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms