RNA–Protein interactions for RNA: ENST00000337354.8

SEC13-201, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SEC13, Length 1,363 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-201ENST00000337354 KIF1BPQ96EK5 621 aa18.98■□□□□ 0.63
SEC13-201ENST00000337354 GPBP1L1Q9HC44 474 aaPredicted RBP18.98■□□□□ 0.63
SEC13-201ENST00000337354 G3V3G9 751 aa18.97■□□□□ 0.63
SEC13-201ENST00000337354 SNAP23O00161 211 aa18.97■□□□□ 0.63
SEC13-201ENST00000337354 SLC5A1P13866 664 aa18.97■□□□□ 0.63
SEC13-201ENST00000337354 DCAF8Q5TAQ9 597 aa18.97■□□□□ 0.63
SEC13-201ENST00000337354 NIM1KQ8IY84 436 aa18.97■□□□□ 0.63
SEC13-201ENST00000337354 COA1Q9GZY4 146 aa18.97■□□□□ 0.63
SEC13-201ENST00000337354 ZC3H4Q9UPT8 1303 aaKnown RBP18.97■□□□□ 0.63
SEC13-201ENST00000337354 ATP2B3Q16720 1220 aa18.96■□□□□ 0.63
SEC13-201ENST00000337354 CAVIN4Q5BKX8 364 aa18.96■□□□□ 0.63
SEC13-201ENST00000337354 PODNQ7Z5L7 613 aa18.96■□□□□ 0.63
SEC13-201ENST00000337354 RHPN1Q8TCX5 695 aa18.96■□□□□ 0.63
SEC13-201ENST00000337354 GCC1Q96CN9 775 aa18.96■□□□□ 0.63
SEC13-201ENST00000337354 ZNRF3Q9ULT6 936 aa18.96■□□□□ 0.63
SEC13-201ENST00000337354 ERICH6BQ5W0A0 696 aa18.95■□□□□ 0.62
SEC13-201ENST00000337354 GPR101Q96P66 508 aaPredicted RBP18.95■□□□□ 0.62
SEC13-201ENST00000337354 IRS2Q9Y4H2 1338 aa18.95■□□□□ 0.62
SEC13-201ENST00000337354 FZD9O00144 591 aa18.94■□□□□ 0.62
SEC13-201ENST00000337354 HIBADHP31937 336 aaKnown RBP18.94■□□□□ 0.62
SEC13-201ENST00000337354 ZNF804AQ7Z570 1209 aa18.94■□□□□ 0.62
SEC13-201ENST00000337354 TXNRD3Q86VQ6 643 aa18.94■□□□□ 0.62
SEC13-201ENST00000337354 FAM84BQ96KN1 310 aaPredicted RBP18.94■□□□□ 0.62
SEC13-201ENST00000337354 DUOX1Q9NRD9 1551 aa18.94■□□□□ 0.62
SEC13-201ENST00000337354 A0A1B0GUL7 405 aa18.93■□□□□ 0.62
SEC13-201ENST00000337354 TIMM10P62072 90 aa18.93■□□□□ 0.62
SEC13-201ENST00000337354 DOK7Q18PE1 504 aa18.93■□□□□ 0.62
SEC13-201ENST00000337354 TNNI3KQ59H18 835 aa18.93■□□□□ 0.62
SEC13-201ENST00000337354 FBXO33Q7Z6M2 555 aa18.93■□□□□ 0.62
SEC13-201ENST00000337354 CLASRPQ8N2M8 674 aaKnown RBP18.93■□□□□ 0.62
SEC13-201ENST00000337354 LRRCC1Q9C099 1032 aa18.93■□□□□ 0.62
SEC13-201ENST00000337354 FPGT-TNNI3KV9GXZ4 949 aa18.93■□□□□ 0.62
SEC13-201ENST00000337354 KLRK1P26718 216 aa18.93■□□□□ 0.62
SEC13-201ENST00000337354 EIF6P56537 245 aaKnown RBP18.93■□□□□ 0.62
SEC13-201ENST00000337354 DPY19L2Q6NUT2 758 aa18.93■□□□□ 0.62
SEC13-201ENST00000337354 VPS37DQ86XT2 251 aa18.93■□□□□ 0.62
SEC13-201ENST00000337354 NEUROD6Q96NK8 337 aa18.93■□□□□ 0.62
SEC13-201ENST00000337354 CD209Q9NNX6 404 aa18.93■□□□□ 0.62
SEC13-201ENST00000337354 ZBTB22O15209 634 aa18.92■□□□□ 0.62
SEC13-201ENST00000337354 ECE2O60344 883 aa18.92■□□□□ 0.62
SEC13-201ENST00000337354 KDM2BQ8NHM5 1336 aa18.92■□□□□ 0.62
SEC13-201ENST00000337354 DBNDD1Q9H9R9 158 aa18.92■□□□□ 0.62
SEC13-201ENST00000337354 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP18.92■□□□□ 0.62
SEC13-201ENST00000337354 LTBP1Q14766 1721 aa18.91■□□□□ 0.62
SEC13-201ENST00000337354 IGHDP01880 384 aa18.91■□□□□ 0.62
SEC13-201ENST00000337354 IL1R1P14778 569 aa18.91■□□□□ 0.62
SEC13-201ENST00000337354 GYG1P46976 350 aa18.91■□□□□ 0.62
SEC13-201ENST00000337354 EAF2Q96CJ1 260 aaPredicted RBP18.91■□□□□ 0.62
SEC13-201ENST00000337354 XAGE2Q96GT9 111 aa18.91■□□□□ 0.62
SEC13-201ENST00000337354 GNL3LQ9NVN8 582 aaKnown RBP18.91■□□□□ 0.62
SEC13-201ENST00000337354 APBB1O00213 710 aa18.9■□□□□ 0.62
SEC13-201ENST00000337354 BCAMP50895 628 aa18.9■□□□□ 0.62
SEC13-201ENST00000337354 TNIP1Q15025 636 aa18.9■□□□□ 0.62
SEC13-201ENST00000337354 GORABQ5T7V8 394 aa18.9■□□□□ 0.62
SEC13-201ENST00000337354 SMC5Q8IY18 1101 aa18.9■□□□□ 0.62
SEC13-201ENST00000337354 TDRD7Q8NHU6 1098 aaKnown RBP18.9■□□□□ 0.62
SEC13-201ENST00000337354 IL1RAPL2Q9NP60 686 aa18.9■□□□□ 0.62
SEC13-201ENST00000337354 ZBTB47Q9UFB7 747 aaPredicted RBP18.9■□□□□ 0.62
SEC13-201ENST00000337354 YDJCA8MPS7 323 aa18.89■□□□□ 0.61
SEC13-201ENST00000337354 CXCL9Q07325 125 aa18.88■□□□□ 0.61
SEC13-201ENST00000337354 CCDC158Q5M9N0 1113 aa18.88■□□□□ 0.61
SEC13-201ENST00000337354 STRIP1Q5VSL9 837 aa18.88■□□□□ 0.61
SEC13-201ENST00000337354 CCDC102BQ68D86 513 aa18.88■□□□□ 0.61
SEC13-201ENST00000337354 CIAPIN1Q6FI81 312 aa18.88■□□□□ 0.61
SEC13-201ENST00000337354 AACSQ86V21 672 aa18.88■□□□□ 0.61
SEC13-201ENST00000337354 NMRK2Q9NPI5 230 aa18.88■□□□□ 0.61
SEC13-201ENST00000337354 USP17L3A6NCW0 530 aa18.87■□□□□ 0.61
SEC13-201ENST00000337354 USP17L4A6NCW7 530 aa18.87■□□□□ 0.61
SEC13-201ENST00000337354 GLTPD2A6NH11 291 aa18.87■□□□□ 0.61
SEC13-201ENST00000337354 SEMA3EO15041 775 aa18.87■□□□□ 0.61
SEC13-201ENST00000337354 IFIT2P09913 472 aaKnown RBP18.87■□□□□ 0.61
SEC13-201ENST00000337354 ADORA1P30542 326 aa18.87■□□□□ 0.61
SEC13-201ENST00000337354 USP17L1Q7RTZ2 530 aa18.87■□□□□ 0.61
SEC13-201ENST00000337354 GPC2Q8N158 579 aa18.87■□□□□ 0.61
SEC13-201ENST00000337354 WDR90Q96KV7 1748 aa18.87■□□□□ 0.61
SEC13-201ENST00000337354 COL4A5P29400 1685 aa18.87■□□□□ 0.61
SEC13-201ENST00000337354 FRAT2O75474 233 aaPredicted RBP18.86■□□□□ 0.61
SEC13-201ENST00000337354 ANKRD45Q5TZF3 282 aa18.86■□□□□ 0.61
SEC13-201ENST00000337354 TTLL5Q6EMB2 1281 aa18.86■□□□□ 0.61
SEC13-201ENST00000337354 ZNF512BQ96KM6 892 aaPredicted RBP18.86■□□□□ 0.61
SEC13-201ENST00000337354 DBNDD2Q9BQY9 259 aa18.86■□□□□ 0.61
SEC13-201ENST00000337354 CCDC8Q9H0W5 538 aaPredicted RBP18.86■□□□□ 0.61
SEC13-201ENST00000337354 ZNF609O15014 1411 aa18.86■□□□□ 0.61
SEC13-201ENST00000337354 RAD17O75943 681 aa18.85■□□□□ 0.61
SEC13-201ENST00000337354 VIL1P09327 827 aaKnown RBP18.85■□□□□ 0.61
SEC13-201ENST00000337354 UQCRFS1P1P0C7P4 283 aa18.85■□□□□ 0.61
SEC13-201ENST00000337354 KCNQ5Q9NR82 932 aa18.85■□□□□ 0.61
SEC13-201ENST00000337354 DBNLQ9UJU6 430 aaKnown RBP18.85■□□□□ 0.61
SEC13-201ENST00000337354 FAM205AQ6ZU69 1335 aa18.85■□□□□ 0.61
SEC13-201ENST00000337354 A0A1B0GUL6 1792 aa18.84■□□□□ 0.61
SEC13-201ENST00000337354 PHKA1P46020 1223 aa18.84■□□□□ 0.61
SEC13-201ENST00000337354 GTF2IP78347 998 aa18.84■□□□□ 0.61
SEC13-201ENST00000337354 DENND2AQ9ULE3 1009 aa18.84■□□□□ 0.61
SEC13-201ENST00000337354 ZNF541Q9H0D2 1346 aa18.84■□□□□ 0.61
SEC13-201ENST00000337354 PSMD14O00487 310 aa18.83■□□□□ 0.61
SEC13-201ENST00000337354 SMARCA5O60264 1052 aaPredicted RBP18.83■□□□□ 0.61
SEC13-201ENST00000337354 DDNO94850 711 aaPredicted RBP18.83■□□□□ 0.61
SEC13-201ENST00000337354 RPS12P25398 132 aaKnown RBP18.83■□□□□ 0.61
SEC13-201ENST00000337354 FKBP1AP62942 108 aaKnown RBP18.83■□□□□ 0.61
SEC13-201ENST00000337354 C16orf71Q8IYS4 520 aaPredicted RBP18.83■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms