RNA–Protein interactions for RNA: ENST00000337339.6

MSL3-202, Transcript of MSL complex subunit 3, humanhuman

TSL 2 BASIC

Gene MSL3, Length 3,446 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSL3-202ENST00000337339 NUTM2AQ8IVF1 878 aaPredicted RBP11.42□□□□□ -0.58
MSL3-202ENST00000337339 CCDC82Q8N4S0 544 aa11.42□□□□□ -0.58
MSL3-202ENST00000337339 CARD10Q9BWT7 1032 aa11.42□□□□□ -0.58
MSL3-202ENST00000337339 DNAJC25Q9H1X3 360 aa11.42□□□□□ -0.58
MSL3-202ENST00000337339 IRS4O14654 1257 aaPredicted RBP11.42□□□□□ -0.58
MSL3-202ENST00000337339 ZNF213O14771 459 aa11.42□□□□□ -0.58
MSL3-202ENST00000337339 TMEM87AQ8NBN3 555 aa11.42□□□□□ -0.58
MSL3-202ENST00000337339 KCNB2Q92953 911 aa11.42□□□□□ -0.58
MSL3-202ENST00000337339 IL17RAQ96F46 866 aa11.42□□□□□ -0.58
MSL3-202ENST00000337339 PUS7LQ9H0K6 701 aaKnown RBP11.42□□□□□ -0.58
MSL3-202ENST00000337339 EIF2AK3Q9NZJ5 1116 aaKnown RBP11.42□□□□□ -0.58
MSL3-202ENST00000337339 KLF18A0A0U1RQI7 1052 aa11.41□□□□□ -0.58
MSL3-202ENST00000337339 GOLGA8BA8MQT2 603 aa11.41□□□□□ -0.58
MSL3-202ENST00000337339 LRRFIP1Q32MZ4 808 aaKnown RBP11.41□□□□□ -0.58
MSL3-202ENST00000337339 NFXL1Q6ZNB6 911 aa11.41□□□□□ -0.58
MSL3-202ENST00000337339 SDF4Q9BRK5 362 aa11.41□□□□□ -0.58
MSL3-202ENST00000337339 HELLSQ9NRZ9 838 aa11.41□□□□□ -0.58
MSL3-202ENST00000337339 CFAP45Q9UL16 551 aa11.41□□□□□ -0.58
MSL3-202ENST00000337339 ZBTB1Q9Y2K1 713 aa11.41□□□□□ -0.58
MSL3-202ENST00000337339 MED1Q15648 1581 aaPredicted RBP11.41□□□□□ -0.58
MSL3-202ENST00000337339 UQCRHLA0A096LP55 91 aa11.41□□□□□ -0.58
MSL3-202ENST00000337339 ANKRD18BA2A2Z9 1011 aa11.41□□□□□ -0.58
MSL3-202ENST00000337339 EXOC5O00471 708 aa11.41□□□□□ -0.58
MSL3-202ENST00000337339 FGAP02671 866 aa11.41□□□□□ -0.58
MSL3-202ENST00000337339 UQCRHP07919 91 aa11.41□□□□□ -0.58
MSL3-202ENST00000337339 HMGB1P09429 215 aaKnown RBP11.41□□□□□ -0.58
MSL3-202ENST00000337339 ZMYM1Q5SVZ6 1142 aa11.41□□□□□ -0.58
MSL3-202ENST00000337339 CCDC73Q6ZRK6 1079 aa11.41□□□□□ -0.58
MSL3-202ENST00000337339 TCHHQ07283 1943 aa11.41□□□□□ -0.58
MSL3-202ENST00000337339 SLIT3O75094 1523 aa11.41□□□□□ -0.58
MSL3-202ENST00000337339 BECN2A8MW95 431 aa11.41□□□□□ -0.58
MSL3-202ENST00000337339 GOLGA6L19H0YKK7 550 aa11.41□□□□□ -0.58
MSL3-202ENST00000337339 PRC1O43663 620 aa11.4□□□□□ -0.58
MSL3-202ENST00000337339 ZNF165P49910 485 aa11.4□□□□□ -0.58
MSL3-202ENST00000337339 HS1BP3Q53T59 392 aa11.4□□□□□ -0.58
MSL3-202ENST00000337339 CCAR1Q8IX12 1150 aaKnown RBP11.4□□□□□ -0.58
MSL3-202ENST00000337339 OVOS2A0A0G2JMS6 1433 aa11.4□□□□□ -0.58
MSL3-202ENST00000337339 GPAA1O43292 621 aa11.4□□□□□ -0.58
MSL3-202ENST00000337339 KINO60870 393 aaKnown RBP11.4□□□□□ -0.58
MSL3-202ENST00000337339 MPHOSPH8Q99549 860 aa11.4□□□□□ -0.58
MSL3-202ENST00000337339 RGPD5Q99666 1765 aa11.4□□□□□ -0.59
MSL3-202ENST00000337339 USPL1Q5W0Q7 1092 aa11.4□□□□□ -0.59
MSL3-202ENST00000337339 ISM2Q6H9L7 571 aa11.4□□□□□ -0.59
MSL3-202ENST00000337339 MICU3Q86XE3 530 aa11.4□□□□□ -0.59
MSL3-202ENST00000337339 DZIP3Q86Y13 1208 aaKnown RBP11.4□□□□□ -0.59
MSL3-202ENST00000337339 NSUN7Q8NE18 718 aaKnown RBP11.4□□□□□ -0.59
MSL3-202ENST00000337339 PGBD1Q96JS3 809 aa11.4□□□□□ -0.59
MSL3-202ENST00000337339 ATG3Q9NT62 314 aa11.4□□□□□ -0.59
MSL3-202ENST00000337339 CTNNA3Q9UI47 895 aa11.4□□□□□ -0.59
MSL3-202ENST00000337339 STK38Q15208 465 aa11.39□□□□□ -0.59
MSL3-202ENST00000337339 UVSSAQ2YD98 709 aa11.39□□□□□ -0.59
MSL3-202ENST00000337339 BICDL1Q6ZP65 573 aa11.39□□□□□ -0.59
MSL3-202ENST00000337339 TSC1Q92574 1164 aa11.39□□□□□ -0.59
MSL3-202ENST00000337339 USP28Q96RU2 1077 aa11.39□□□□□ -0.59
MSL3-202ENST00000337339 INCENPQ9NQS7 918 aa11.39□□□□□ -0.59
MSL3-202ENST00000337339 ORC3Q9UBD5 711 aaPredicted RBP11.39□□□□□ -0.59
MSL3-202ENST00000337339 ATP2B1P20020 1258 aa11.39□□□□□ -0.59
MSL3-202ENST00000337339 PDIA3P30101 505 aaKnown RBP11.39□□□□□ -0.59
MSL3-202ENST00000337339 FAM200AQ8TCP9 573 aa11.39□□□□□ -0.59
MSL3-202ENST00000337339 C8orf76Q96K31 380 aa11.39□□□□□ -0.59
MSL3-202ENST00000337339 DDX24Q9GZR7 859 aaKnown RBP eCLIP11.39□□□□□ -0.594e-7■■■■□ 21.7
MSL3-202ENST00000337339 DENND2AQ9ULE3 1009 aa11.39□□□□□ -0.59
MSL3-202ENST00000337339 KDM3BQ7LBC6 1761 aa11.39□□□□□ -0.59
MSL3-202ENST00000337339 GTF2E1P29083 439 aaPredicted RBP11.38□□□□□ -0.59
MSL3-202ENST00000337339 SYNE3Q6ZMZ3 975 aa11.38□□□□□ -0.59
MSL3-202ENST00000337339 FSIP1Q8NA03 581 aa11.38□□□□□ -0.59
MSL3-202ENST00000337339 ZBTB38Q8NAP3 1195 aaPredicted RBP11.38□□□□□ -0.59
MSL3-202ENST00000337339 AIDAQ96BJ3 306 aa11.38□□□□□ -0.59
MSL3-202ENST00000337339 MYL10Q9BUA6 226 aa11.38□□□□□ -0.59
MSL3-202ENST00000337339 DSCC1Q9BVC3 393 aa11.38□□□□□ -0.59
MSL3-202ENST00000337339 GOLGA6L6A8MZA4 724 aa11.38□□□□□ -0.59
MSL3-202ENST00000337339 BIN1O00499 593 aa11.38□□□□□ -0.59
MSL3-202ENST00000337339 HMGN5P82970 282 aaKnown RBP11.38□□□□□ -0.59
MSL3-202ENST00000337339 CHMP4CQ96CF2 233 aa11.38□□□□□ -0.59
MSL3-202ENST00000337339 A0A1B0GVL5 298 aa11.38□□□□□ -0.59
MSL3-202ENST00000337339 AP5Z1O43299 807 aa11.38□□□□□ -0.59
MSL3-202ENST00000337339 PFKFB2O60825 505 aa11.38□□□□□ -0.59
MSL3-202ENST00000337339 MCM5P33992 734 aa11.38□□□□□ -0.59
MSL3-202ENST00000337339 KCNQ4P56696 695 aa11.38□□□□□ -0.59
MSL3-202ENST00000337339 NOLC1Q14978 699 aaKnown RBP eCLIP11.38□□□□□ -0.59
MSL3-202ENST00000337339 ZSCAN16Q9H4T2 348 aaPredicted RBP11.38□□□□□ -0.59
MSL3-202ENST00000337339 CBX8Q9HC52 389 aa11.38□□□□□ -0.59
MSL3-202ENST00000337339 DDX19AQ9NUU7 478 aaKnown RBP11.38□□□□□ -0.59
MSL3-202ENST00000337339 ABCF2Q9UG63 623 aa11.38□□□□□ -0.59
MSL3-202ENST00000337339 SH3TC1Q8TE82 1336 aa11.37□□□□□ -0.59
MSL3-202ENST00000337339 PTGS1P23219 599 aa11.37□□□□□ -0.59
MSL3-202ENST00000337339 PHKA1P46020 1223 aa11.37□□□□□ -0.59
MSL3-202ENST00000337339 TSGA10IPQ3SY00 556 aa11.37□□□□□ -0.59
MSL3-202ENST00000337339 NLRP10Q86W26 655 aa11.37□□□□□ -0.59
MSL3-202ENST00000337339 ISCA1Q9BUE6 129 aa11.37□□□□□ -0.59
MSL3-202ENST00000337339 TEX13AQ9BXU3 409 aaPredicted RBP11.37□□□□□ -0.59
MSL3-202ENST00000337339 MRVI1Q9Y6F6 885 aa11.37□□□□□ -0.59
MSL3-202ENST00000337339 CTDNEP1O95476 244 aa11.37□□□□□ -0.59
MSL3-202ENST00000337339 PCCAP05165 728 aaPredicted RBP11.37□□□□□ -0.59
MSL3-202ENST00000337339 MCAMP43121 646 aa11.37□□□□□ -0.59
MSL3-202ENST00000337339 RESTQ13127 1097 aa11.37□□□□□ -0.59
MSL3-202ENST00000337339 GIGYF2Q6Y7W6 1299 aaKnown RBP11.37□□□□□ -0.59
MSL3-202ENST00000337339 CCDC186Q7Z3E2 898 aa11.37□□□□□ -0.59
MSL3-202ENST00000337339 FILIP1Q7Z7B0 1213 aa11.37□□□□□ -0.59
MSL3-202ENST00000337339 TTLL11Q8NHH1 800 aa11.37□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 83.6 ms