RNA–Protein interactions for RNA: ENST00000335643.12

KATNA1-201, Transcript of katanin catalytic subunit A1, humanhuman

TSL 1 (best) BASIC

Gene KATNA1, Length 1,564 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KATNA1-201ENST00000335643 DPF2Q92785 391 aa18.76■□□□□ 0.59
KATNA1-201ENST00000335643 MEIS3Q99687 375 aa18.76■□□□□ 0.59
KATNA1-201ENST00000335643 MXD3Q9BW11 206 aa18.76■□□□□ 0.59
KATNA1-201ENST00000335643 CNNM1Q9NRU3 951 aa18.76■□□□□ 0.59
KATNA1-201ENST00000335643 PLIN1O60240 522 aa18.76■□□□□ 0.59
KATNA1-201ENST00000335643 LRRC24Q50LG9 513 aa18.76■□□□□ 0.59
KATNA1-201ENST00000335643 INTS3Q68E01 1043 aaKnown RBP18.76■□□□□ 0.59
KATNA1-201ENST00000335643 PODNQ7Z5L7 613 aa18.76■□□□□ 0.59
KATNA1-201ENST00000335643 RFX5P48382 616 aaPredicted RBP18.75■□□□□ 0.59
KATNA1-201ENST00000335643 ATF7IPQ6VMQ6 1270 aa18.75■□□□□ 0.59
KATNA1-201ENST00000335643 CLUAP1Q96AJ1 413 aa18.75■□□□□ 0.59
KATNA1-201ENST00000335643 RIPOR2Q9Y4F9 1068 aa18.75■□□□□ 0.59
KATNA1-201ENST00000335643 ZNF609O15014 1411 aa18.75■□□□□ 0.59
KATNA1-201ENST00000335643 UBTFL1P0CB47 393 aaPredicted RBP18.74■□□□□ 0.59
KATNA1-201ENST00000335643 KCNJ4P48050 445 aa18.74■□□□□ 0.59
KATNA1-201ENST00000335643 TBC1D10BQ4KMP7 808 aaPredicted RBP18.74■□□□□ 0.59
KATNA1-201ENST00000335643 RSBN1LQ6PCB5 846 aaPredicted RBP18.74■□□□□ 0.59
KATNA1-201ENST00000335643 GMLQ99445 158 aa18.74■□□□□ 0.59
KATNA1-201ENST00000335643 COA1Q9GZY4 146 aa18.74■□□□□ 0.59
KATNA1-201ENST00000335643 USP17L3A6NCW0 530 aa18.73■□□□□ 0.59
KATNA1-201ENST00000335643 USP17L4A6NCW7 530 aa18.73■□□□□ 0.59
KATNA1-201ENST00000335643 TRAF5O00463 557 aa18.73■□□□□ 0.59
KATNA1-201ENST00000335643 RPS12P25398 132 aaKnown RBP18.73■□□□□ 0.59
KATNA1-201ENST00000335643 DACT2Q5SW24 774 aa18.73■□□□□ 0.59
KATNA1-201ENST00000335643 USP17L1Q7RTZ2 530 aa18.73■□□□□ 0.59
KATNA1-201ENST00000335643 LRRFIP2Q9Y608 721 aaKnown RBP18.73■□□□□ 0.59
KATNA1-201ENST00000335643 H7C1D1 291 aa18.72■□□□□ 0.59
KATNA1-201ENST00000335643 C15orf52Q6ZUT6 534 aaKnown RBP18.72■□□□□ 0.59
KATNA1-201ENST00000335643 PGAP2Q9UHJ9 254 aa18.72■□□□□ 0.59
KATNA1-201ENST00000335643 RBM26Q5T8P6 1007 aaKnown RBP18.72■□□□□ 0.59
KATNA1-201ENST00000335643 VGLL2Q8N8G2 317 aa18.72■□□□□ 0.59
KATNA1-201ENST00000335643 CD209Q9NNX6 404 aa18.72■□□□□ 0.59
KATNA1-201ENST00000335643 ASTN2O75129 1339 aaPredicted RBP18.71■□□□□ 0.59
KATNA1-201ENST00000335643 TRPM7Q96QT4 1865 aa18.71■□□□□ 0.59
KATNA1-201ENST00000335643 POLR2AP24928 1970 aaKnown RBP18.71■□□□□ 0.59
KATNA1-201ENST00000335643 PTPN12Q05209 780 aaKnown RBP18.71■□□□□ 0.59
KATNA1-201ENST00000335643 DLK2Q6UY11 383 aa18.71■□□□□ 0.59
KATNA1-201ENST00000335643 AGBL3Q8NEM8 1001 aa18.71■□□□□ 0.59
KATNA1-201ENST00000335643 FBXW7Q969H0 707 aa18.71■□□□□ 0.59
KATNA1-201ENST00000335643 IPO8O15397 1037 aaKnown RBP18.7■□□□□ 0.58
KATNA1-201ENST00000335643 ZKSCAN2Q63HK3 967 aa18.7■□□□□ 0.58
KATNA1-201ENST00000335643 KLRG1Q96E93 195 aa18.7■□□□□ 0.58
KATNA1-201ENST00000335643 GLIS2Q9BZE0 524 aaPredicted RBP18.7■□□□□ 0.58
KATNA1-201ENST00000335643 CREBZFQ9NS37 354 aa18.7■□□□□ 0.58
KATNA1-201ENST00000335643 MROH5Q6ZUA9 1318 aa18.7■□□□□ 0.58
KATNA1-201ENST00000335643 ZNF280AP59817 542 aaPredicted RBP18.69■□□□□ 0.58
KATNA1-201ENST00000335643 GTF2IP78347 998 aa18.69■□□□□ 0.58
KATNA1-201ENST00000335643 STRIP1Q5VSL9 837 aa18.69■□□□□ 0.58
KATNA1-201ENST00000335643 TMEM57Q8N5G2 664 aa18.69■□□□□ 0.58
KATNA1-201ENST00000335643 RLBP1P12271 317 aa18.68■□□□□ 0.58
KATNA1-201ENST00000335643 GYG1P46976 350 aa18.68■□□□□ 0.58
KATNA1-201ENST00000335643 UBE4AQ14139 1066 aa18.68■□□□□ 0.58
KATNA1-201ENST00000335643 KIF4BQ2VIQ3 1234 aa18.68■□□□□ 0.58
KATNA1-201ENST00000335643 TTLL5Q6EMB2 1281 aa18.68■□□□□ 0.58
KATNA1-201ENST00000335643 ATG9AQ7Z3C6 839 aa18.68■□□□□ 0.58
KATNA1-201ENST00000335643 JAG2Q9Y219 1238 aa18.68■□□□□ 0.58
KATNA1-201ENST00000335643 TMEM88BA6NKF7 163 aa18.68■□□□□ 0.58
KATNA1-201ENST00000335643 IL1R1P14778 569 aa18.68■□□□□ 0.58
KATNA1-201ENST00000335643 METTL24Q5JXM2 366 aa18.68■□□□□ 0.58
KATNA1-201ENST00000335643 CST9Q5W186 159 aa18.68■□□□□ 0.58
KATNA1-201ENST00000335643 CERS5Q8N5B7 392 aa18.68■□□□□ 0.58
KATNA1-201ENST00000335643 ZC3H15Q8WU90 426 aaKnown RBP18.68■□□□□ 0.58
KATNA1-201ENST00000335643 PA2G4Q9UQ80 394 aaKnown RBP18.68■□□□□ 0.58
KATNA1-201ENST00000335643 PDE8BO95263 885 aa18.67■□□□□ 0.58
KATNA1-201ENST00000335643 USP17L8P0C7I0 530 aa18.67■□□□□ 0.58
KATNA1-201ENST00000335643 SIL1Q9H173 461 aa18.67■□□□□ 0.58
KATNA1-201ENST00000335643 EYA2O00167 538 aa18.66■□□□□ 0.58
KATNA1-201ENST00000335643 ZNF804AQ7Z570 1209 aa18.66■□□□□ 0.58
KATNA1-201ENST00000335643 FAM84BQ96KN1 310 aaPredicted RBP18.66■□□□□ 0.58
KATNA1-201ENST00000335643 MYOZ2Q9NPC6 264 aa18.66■□□□□ 0.58
KATNA1-201ENST00000335643 MKRN1Q9UHC7 482 aaKnown RBP18.66■□□□□ 0.58
KATNA1-201ENST00000335643 ARAP2Q8WZ64 1704 aa18.64■□□□□ 0.58
KATNA1-201ENST00000335643 GNAI3P08754 354 aa18.64■□□□□ 0.58
KATNA1-201ENST00000335643 FGFR2P21802 821 aa18.64■□□□□ 0.58
KATNA1-201ENST00000335643 USP48Q86UV5 1035 aa18.64■□□□□ 0.58
KATNA1-201ENST00000335643 KIAA0825Q8IV33 1275 aa18.64■□□□□ 0.58
KATNA1-201ENST00000335643 GGA3Q9NZ52 723 aa18.64■□□□□ 0.58
KATNA1-201ENST00000335643 SCAF8Q9UPN6 1271 aaKnown RBP18.64■□□□□ 0.58
KATNA1-201ENST00000335643 CNTNAP1P78357 1384 aa18.64■□□□□ 0.57
KATNA1-201ENST00000335643 ADM5C9JUS6 153 aa18.64■□□□□ 0.57
KATNA1-201ENST00000335643 SCARF1Q14162 830 aa18.64■□□□□ 0.57
KATNA1-201ENST00000335643 CDC37L1Q7L3B6 337 aa18.64■□□□□ 0.57
KATNA1-201ENST00000335643 JMYQ8N9B5 988 aa18.64■□□□□ 0.57
KATNA1-201ENST00000335643 TDRD7Q8NHU6 1098 aaKnown RBP18.64■□□□□ 0.57
KATNA1-201ENST00000335643 MYO3BQ8WXR4 1341 aa18.63■□□□□ 0.57
KATNA1-201ENST00000335643 HIBADHP31937 336 aaKnown RBP18.63■□□□□ 0.57
KATNA1-201ENST00000335643 MTX1Q13505 466 aa18.63■□□□□ 0.57
KATNA1-201ENST00000335643 NBPF9Q3BBW0 867 aa18.63■□□□□ 0.57
KATNA1-201ENST00000335643 IQSEC3Q9UPP2 1182 aaPredicted RBP18.63■□□□□ 0.57
KATNA1-201ENST00000335643 SRGAP3O43295 1099 aa18.62■□□□□ 0.57
KATNA1-201ENST00000335643 ANGEL2Q5VTE6 544 aaKnown RBP18.62■□□□□ 0.57
KATNA1-201ENST00000335643 KRT26Q7Z3Y9 468 aa18.62■□□□□ 0.57
KATNA1-201ENST00000335643 FBXO33Q7Z6M2 555 aa18.62■□□□□ 0.57
KATNA1-201ENST00000335643 DZIP1LQ8IYY4 767 aaKnown RBP18.62■□□□□ 0.57
KATNA1-201ENST00000335643 PCDHAC2Q9Y5I4 1007 aa18.62■□□□□ 0.57
KATNA1-201ENST00000335643 PNMA6EA0A0J9YXQ4 647 aa18.61■□□□□ 0.57
KATNA1-201ENST00000335643 CIAO1O76071 339 aa18.61■□□□□ 0.57
KATNA1-201ENST00000335643 SASH1O94885 1247 aa18.61■□□□□ 0.57
KATNA1-201ENST00000335643 CELF2O95319 508 aaKnown RBP18.61■□□□□ 0.57
KATNA1-201ENST00000335643 BCAMP50895 628 aa18.61■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms