RNA–Protein interactions for RNA: ENST00000334654.4

CHGA-202, Transcript of chromogranin A, humanhuman

TSL 1 (best) BASIC

Gene CHGA, Length 1,474 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHGA-202ENST00000334654 PRELPP51888 382 aa21.56■■□□□ 1.04
CHGA-202ENST00000334654 C16orf71Q8IYS4 520 aaPredicted RBP21.56■■□□□ 1.04
CHGA-202ENST00000334654 PELP1Q8IZL8 1130 aaKnown RBP21.56■■□□□ 1.04
CHGA-202ENST00000334654 CHD1LQ86WJ1 897 aa21.55■■□□□ 1.04
CHGA-202ENST00000334654 CLASRPQ8N2M8 674 aaKnown RBP21.55■■□□□ 1.04
CHGA-202ENST00000334654 CCDC8Q9H0W5 538 aaPredicted RBP21.55■■□□□ 1.04
CHGA-202ENST00000334654 TLR7Q9NYK1 1049 aaKnown RBP21.55■■□□□ 1.04
CHGA-202ENST00000334654 SBF1O95248 1867 aa21.55■■□□□ 1.04
CHGA-202ENST00000334654 CCDC88AQ3V6T2 1871 aa21.55■■□□□ 1.04
CHGA-202ENST00000334654 KCNJ4P48050 445 aa21.54■■□□□ 1.04
CHGA-202ENST00000334654 AACSQ86V21 672 aa21.54■■□□□ 1.04
CHGA-202ENST00000334654 DBNLQ9UJU6 430 aaKnown RBP21.54■■□□□ 1.04
CHGA-202ENST00000334654 MED23Q9ULK4 1368 aa21.54■■□□□ 1.04
CHGA-202ENST00000334654 UTRNP46939 3433 aa21.53■■□□□ 1.04
CHGA-202ENST00000334654 IFIT1P09914 478 aaKnown RBP21.53■■□□□ 1.04
CHGA-202ENST00000334654 SLC5A1P13866 664 aa21.53■■□□□ 1.04
CHGA-202ENST00000334654 RASSF7Q02833 373 aa21.53■■□□□ 1.04
CHGA-202ENST00000334654 GPR162Q16538 588 aa21.53■■□□□ 1.04
CHGA-202ENST00000334654 ARHGAP27Q6ZUM4 889 aa21.53■■□□□ 1.04
CHGA-202ENST00000334654 XAGE2Q96GT9 111 aa21.53■■□□□ 1.04
CHGA-202ENST00000334654 FAM84BQ96KN1 310 aaPredicted RBP21.53■■□□□ 1.04
CHGA-202ENST00000334654 NEUROD6Q96NK8 337 aa21.53■■□□□ 1.04
CHGA-202ENST00000334654 DBNDD2Q9BQY9 259 aa21.53■■□□□ 1.04
CHGA-202ENST00000334654 LNPKQ9C0E8 428 aa21.53■■□□□ 1.04
CHGA-202ENST00000334654 TAOK3Q9H2K8 898 aa21.53■■□□□ 1.04
CHGA-202ENST00000334654 SALL3Q9BXA9 1300 aa21.53■■□□□ 1.04
CHGA-202ENST00000334654 WASHC4Q2M389 1173 aa21.52■■□□□ 1.04
CHGA-202ENST00000334654 FBXO33Q7Z6M2 555 aa21.52■■□□□ 1.04
CHGA-202ENST00000334654 SUPT20HQ8NEM7 779 aa21.52■■□□□ 1.04
CHGA-202ENST00000334654 OTUD7AQ8TE49 926 aaPredicted RBP21.52■■□□□ 1.04
CHGA-202ENST00000334654 ZNF277Q9NRM2 450 aaPredicted RBP21.52■■□□□ 1.04
CHGA-202ENST00000334654 COL4A5P29400 1685 aa21.52■■□□□ 1.04
CHGA-202ENST00000334654 CHD4Q14839 1912 aa21.52■■□□□ 1.04
CHGA-202ENST00000334654 GYG1P46976 350 aa21.52■■□□□ 1.03
CHGA-202ENST00000334654 KIAA2012Q0VF49 1180 aa21.52■■□□□ 1.03
CHGA-202ENST00000334654 EYA3Q99504 573 aa21.52■■□□□ 1.03
CHGA-202ENST00000334654 BCL11AQ9H165 835 aa21.52■■□□□ 1.03
CHGA-202ENST00000334654 RIMBP2O15034 1052 aa21.51■■□□□ 1.03
CHGA-202ENST00000334654 PDE4AP27815 886 aa21.51■■□□□ 1.03
CHGA-202ENST00000334654 BCAMP50895 628 aa21.51■■□□□ 1.03
CHGA-202ENST00000334654 AOC3Q16853 763 aa21.51■■□□□ 1.03
CHGA-202ENST00000334654 VPS33BQ9H267 617 aa21.51■■□□□ 1.03
CHGA-202ENST00000334654 ZC3H12CQ9C0D7 883 aaKnown RBP21.5■■□□□ 1.03
CHGA-202ENST00000334654 IFIT2P09913 472 aaKnown RBP21.49■■□□□ 1.03
CHGA-202ENST00000334654 IARSP41252 1262 aaKnown RBP21.49■■□□□ 1.03
CHGA-202ENST00000334654 PHKA1P46020 1223 aa21.49■■□□□ 1.03
CHGA-202ENST00000334654 CCDC102BQ68D86 513 aa21.49■■□□□ 1.03
CHGA-202ENST00000334654 DICER1Q9UPY3 1922 aaKnown RBP21.49■■□□□ 1.03
CHGA-202ENST00000334654 GRIN3BO60391 1043 aa21.48■■□□□ 1.03
CHGA-202ENST00000334654 SKAP1Q86WV1 359 aa21.48■■□□□ 1.03
CHGA-202ENST00000334654 AKAP11Q9UKA4 1901 aa21.48■■□□□ 1.03
CHGA-202ENST00000334654 PPIP5K2O43314 1243 aa21.47■■□□□ 1.03
CHGA-202ENST00000334654 HIBADHP31937 336 aaKnown RBP21.47■■□□□ 1.03
CHGA-202ENST00000334654 CD209Q9NNX6 404 aa21.47■■□□□ 1.03
CHGA-202ENST00000334654 SCN9AQ15858 1988 aa21.47■■□□□ 1.03
CHGA-202ENST00000334654 DOK7Q18PE1 504 aa21.46■■□□□ 1.03
CHGA-202ENST00000334654 CAVIN4Q5BKX8 364 aa21.46■■□□□ 1.03
CHGA-202ENST00000334654 PLEKHM2Q8IWE5 1019 aa21.46■■□□□ 1.03
CHGA-202ENST00000334654 COA1Q9GZY4 146 aa21.46■■□□□ 1.03
CHGA-202ENST00000334654 ZBTB47Q9UFB7 747 aaPredicted RBP21.46■■□□□ 1.03
CHGA-202ENST00000334654 ZBTB22O15209 634 aa21.45■■□□□ 1.03
CHGA-202ENST00000334654 IL1R1P14778 569 aa21.45■■□□□ 1.03
CHGA-202ENST00000334654 LARGE2Q8N3Y3 721 aa21.45■■□□□ 1.03
CHGA-202ENST00000334654 TDRD7Q8NHU6 1098 aaKnown RBP21.45■■□□□ 1.03
CHGA-202ENST00000334654 STAP2Q9UGK3 403 aa21.45■■□□□ 1.03
CHGA-202ENST00000334654 ARID4AP29374 1257 aaPredicted RBP21.45■■□□□ 1.02
CHGA-202ENST00000334654 ZNF804AQ7Z570 1209 aa21.45■■□□□ 1.02
CHGA-202ENST00000334654 ZNF512BQ96KM6 892 aaPredicted RBP21.45■■□□□ 1.02
CHGA-202ENST00000334654 DBNDD1Q9H9R9 158 aa21.45■■□□□ 1.02
CHGA-202ENST00000334654 ZNF646O15015 1829 aaPredicted RBP21.44■■□□□ 1.02
CHGA-202ENST00000334654 YDJCA8MPS7 323 aa21.44■■□□□ 1.02
CHGA-202ENST00000334654 LMNB1P20700 586 aa21.44■■□□□ 1.02
CHGA-202ENST00000334654 PDE1AP54750 535 aa21.44■■□□□ 1.02
CHGA-202ENST00000334654 SCARF1Q14162 830 aa21.44■■□□□ 1.02
CHGA-202ENST00000334654 CCDC158Q5M9N0 1113 aa21.44■■□□□ 1.02
CHGA-202ENST00000334654 GORABQ5T7V8 394 aa21.44■■□□□ 1.02
CHGA-202ENST00000334654 TSHZ3Q63HK5 1081 aa21.44■■□□□ 1.02
CHGA-202ENST00000334654 KCNQ5Q9NR82 932 aa21.44■■□□□ 1.02
CHGA-202ENST00000334654 IQSEC3Q9UPP2 1182 aaPredicted RBP21.44■■□□□ 1.02
CHGA-202ENST00000334654 MYH13Q9UKX3 1938 aa21.43■■□□□ 1.02
CHGA-202ENST00000334654 ECE2O60344 883 aa21.43■■□□□ 1.02
CHGA-202ENST00000334654 MX1P20591 662 aa21.43■■□□□ 1.02
CHGA-202ENST00000334654 OSBPL3Q9H4L5 887 aa21.43■■□□□ 1.02
CHGA-202ENST00000334654 ECHDC1Q9NTX5 307 aa21.43■■□□□ 1.02
CHGA-202ENST00000334654 COL1A1P02452 1464 aaPredicted RBP21.42■■□□□ 1.02
CHGA-202ENST00000334654 PSME4Q14997 1843 aa21.42■■□□□ 1.02
CHGA-202ENST00000334654 ATP5JP18859 108 aa21.42■■□□□ 1.02
CHGA-202ENST00000334654 MCAMP43121 646 aa21.42■■□□□ 1.02
CHGA-202ENST00000334654 RASGRF1Q13972 1273 aa21.42■■□□□ 1.02
CHGA-202ENST00000334654 PODNQ7Z5L7 613 aa21.42■■□□□ 1.02
CHGA-202ENST00000334654 VPS37DQ86XT2 251 aa21.42■■□□□ 1.02
CHGA-202ENST00000334654 PI4K2BQ8TCG2 481 aa21.42■■□□□ 1.02
CHGA-202ENST00000334654 TTC41PQ6P2S7 1318 aa21.42■■□□□ 1.02
CHGA-202ENST00000334654 TTC39AQ5SRH9 613 aa21.41■■□□□ 1.02
CHGA-202ENST00000334654 PI16Q6UXB8 463 aa21.41■■□□□ 1.02
CHGA-202ENST00000334654 UQCRFS1P1P0C7P4 283 aa21.4■■□□□ 1.02
CHGA-202ENST00000334654 PPIL4Q8WUA2 492 aaKnown RBP eCLIP21.4■■□□□ 1.02
CHGA-202ENST00000334654 HMG20BQ9P0W2 317 aa21.4■■□□□ 1.02
CHGA-202ENST00000334654 ZNRF3Q9ULT6 936 aa21.4■■□□□ 1.02
CHGA-202ENST00000334654 FZD9O00144 591 aa21.39■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms