RNA–Protein interactions for RNA: ENST00000333213.10

TSEN54-201, Transcript of tRNA splicing endonuclease subunit 54, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSEN54, Length 1,944 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSEN54-201ENST00000333213 NPR1P16066 1061 aa28.21■■■□□ 2.11
TSEN54-201ENST00000333213 FKBP4Q02790 459 aaKnown RBP eCLIP28.21■■■□□ 2.11
TSEN54-201ENST00000333213 ZAP70P43403 619 aa28.2■■■□□ 2.11
TSEN54-201ENST00000333213 UPF2Q9HAU5 1272 aaKnown RBP28.2■■■□□ 2.11
TSEN54-201ENST00000333213 CWC27Q6UX04 472 aaKnown RBP28.2■■■□□ 2.1
TSEN54-201ENST00000333213 KBTBD3Q8NAB2 608 aa28.2■■■□□ 2.1
TSEN54-201ENST00000333213 IRS2Q9Y4H2 1338 aa28.19■■■□□ 2.1
TSEN54-201ENST00000333213 ZBTB7AO95365 584 aa28.19■■■□□ 2.1
TSEN54-201ENST00000333213 GYG1P46976 350 aa28.19■■■□□ 2.1
TSEN54-201ENST00000333213 NBR1Q14596 966 aa28.19■■■□□ 2.1
TSEN54-201ENST00000333213 R3HDM1Q15032 1099 aaKnown RBP28.19■■■□□ 2.1
TSEN54-201ENST00000333213 C22orf23Q9BZE7 217 aa28.19■■■□□ 2.1
TSEN54-201ENST00000333213 MASTLQ96GX5 879 aa28.18■■■□□ 2.1
TSEN54-201ENST00000333213 ZNF804BA4D1E1 1349 aa28.18■■■□□ 2.1
TSEN54-201ENST00000333213 FAM227BQ96M60 508 aa28.18■■■□□ 2.1
TSEN54-201ENST00000333213 SGSM2O43147 1006 aa28.17■■■□□ 2.1
TSEN54-201ENST00000333213 GPSM2P81274 684 aa28.17■■■□□ 2.1
TSEN54-201ENST00000333213 RASGRF1Q13972 1273 aa28.17■■■□□ 2.1
TSEN54-201ENST00000333213 TXNRD3Q86VQ6 643 aa28.17■■■□□ 2.1
TSEN54-201ENST00000333213 C2CD5Q86YS7 1000 aa28.17■■■□□ 2.1
TSEN54-201ENST00000333213 FAM84BQ96KN1 310 aaPredicted RBP28.17■■■□□ 2.1
TSEN54-201ENST00000333213 USP26Q9BXU7 913 aa28.17■■■□□ 2.1
TSEN54-201ENST00000333213 HMG20BQ9P0W2 317 aa28.17■■■□□ 2.1
TSEN54-201ENST00000333213 ANKIB1Q9P2G1 1089 aa28.17■■■□□ 2.1
TSEN54-201ENST00000333213 UQCRFS1P1P0C7P4 283 aa28.16■■■□□ 2.1
TSEN54-201ENST00000333213 CHRNA5P30532 468 aa28.16■■■□□ 2.1
TSEN54-201ENST00000333213 DIAPH3Q9NSV4 1193 aa28.16■■■□□ 2.1
TSEN54-201ENST00000333213 XDHP47989 1333 aa28.16■■■□□ 2.1
TSEN54-201ENST00000333213 CYP2E1P05181 493 aaPredicted RBP28.16■■■□□ 2.1
TSEN54-201ENST00000333213 LRRC37AA6NMS7 1700 aa28.15■■■□□ 2.1
TSEN54-201ENST00000333213 PPEF1O14829 653 aaPredicted RBP28.15■■■□□ 2.1
TSEN54-201ENST00000333213 KCNJ4P48050 445 aa28.15■■■□□ 2.1
TSEN54-201ENST00000333213 NMIQ13287 307 aaPredicted RBP28.15■■■□□ 2.1
TSEN54-201ENST00000333213 SLFNL1Q499Z3 407 aa28.15■■■□□ 2.1
TSEN54-201ENST00000333213 C10orf71Q711Q0 1435 aa28.15■■■□□ 2.1
TSEN54-201ENST00000333213 A0A0D9SFI3 127 aa28.14■■■□□ 2.1
TSEN54-201ENST00000333213 OLFM4Q6UX06 510 aa28.14■■■□□ 2.1
TSEN54-201ENST00000333213 NSFL1CQ9UNZ2 370 aaKnown RBP28.14■■■□□ 2.1
TSEN54-201ENST00000333213 H0YIN7 160 aa28.14■■■□□ 2.09
TSEN54-201ENST00000333213 ALDH1B1P30837 517 aa28.14■■■□□ 2.09
TSEN54-201ENST00000333213 RBM25P49756 843 aaKnown RBP28.14■■■□□ 2.09
TSEN54-201ENST00000333213 FBXO33Q7Z6M2 555 aa28.14■■■□□ 2.09
TSEN54-201ENST00000333213 ZNF622Q969S3 477 aaKnown RBP eCLIP28.14■■■□□ 2.09
TSEN54-201ENST00000333213 ATF5Q9Y2D1 282 aaPredicted RBP28.14■■■□□ 2.09
TSEN54-201ENST00000333213 LEMD3Q9Y2U8 911 aa28.14■■■□□ 2.09
TSEN54-201ENST00000333213 REC8O95072 547 aa28.13■■■□□ 2.09
TSEN54-201ENST00000333213 SP8Q8IXZ3 490 aa28.13■■■□□ 2.09
TSEN54-201ENST00000333213 SPATA5Q8NB90 893 aa28.13■■■□□ 2.09
TSEN54-201ENST00000333213 IQSEC3Q9UPP2 1182 aaPredicted RBP28.13■■■□□ 2.09
TSEN54-201ENST00000333213 ATP6V0A2Q9Y487 856 aa28.13■■■□□ 2.09
TSEN54-201ENST00000333213 RFX7Q2KHR2 1363 aa28.13■■■□□ 2.09
TSEN54-201ENST00000333213 LTBP1Q14766 1721 aa28.12■■■□□ 2.09
TSEN54-201ENST00000333213 GPR101Q96P66 508 aaPredicted RBP28.12■■■□□ 2.09
TSEN54-201ENST00000333213 HIP1O00291 1037 aa28.12■■■□□ 2.09
TSEN54-201ENST00000333213 MTFR1LQ9H019 292 aa28.12■■■□□ 2.09
TSEN54-201ENST00000333213 PODXL2Q9NZ53 605 aa28.12■■■□□ 2.09
TSEN54-201ENST00000333213 CAVIN4Q5BKX8 364 aa28.11■■■□□ 2.09
TSEN54-201ENST00000333213 STYK1Q6J9G0 422 aa28.11■■■□□ 2.09
TSEN54-201ENST00000333213 TMC4Q7Z404 712 aa28.11■■■□□ 2.09
TSEN54-201ENST00000333213 PIH1D3Q9NQM4 214 aaKnown RBP28.11■■■□□ 2.09
TSEN54-201ENST00000333213 COL1A1P02452 1464 aaPredicted RBP28.11■■■□□ 2.09
TSEN54-201ENST00000333213 PSDA5PKW4 1024 aaPredicted RBP28.1■■■□□ 2.09
TSEN54-201ENST00000333213 ANO2Q9NQ90 1003 aa28.1■■■□□ 2.09
TSEN54-201ENST00000333213 POLLQ9UGP5 575 aa28.1■■■□□ 2.09
TSEN54-201ENST00000333213 SEC62Q99442 399 aaKnown RBP28.1■■■□□ 2.09
TSEN54-201ENST00000333213 CACNA1SQ13698 1873 aa28.09■■■□□ 2.09
TSEN54-201ENST00000333213 EIF5BO60841 1220 aaKnown RBP28.09■■■□□ 2.09
TSEN54-201ENST00000333213 MYO5AQ9Y4I1 1855 aaKnown RBP28.09■■■□□ 2.09
TSEN54-201ENST00000333213 ILDR2Q71H61 639 aa28.08■■■□□ 2.09
TSEN54-201ENST00000333213 ZNF589Q86UQ0 364 aaPredicted RBP28.08■■■□□ 2.09
TSEN54-201ENST00000333213 RUFY2Q8WXA3 655 aa28.08■■■□□ 2.09
TSEN54-201ENST00000333213 KIF2CQ99661 725 aa28.08■■■□□ 2.09
TSEN54-201ENST00000333213 UFL1O94874 794 aa28.08■■■□□ 2.09
TSEN54-201ENST00000333213 HIBADHP31937 336 aaKnown RBP28.08■■■□□ 2.09
TSEN54-201ENST00000333213 TBC1D16Q8TBP0 767 aa28.08■■■□□ 2.09
TSEN54-201ENST00000333213 LSG1Q9H089 658 aaKnown RBP28.08■■■□□ 2.09
TSEN54-201ENST00000333213 SLX4Q8IY92 1834 aa28.07■■■□□ 2.08
TSEN54-201ENST00000333213 MED23Q9ULK4 1368 aa28.07■■■□□ 2.08
TSEN54-201ENST00000333213 ATP2B4P23634 1241 aa28.07■■■□□ 2.08
TSEN54-201ENST00000333213 PRPF40BQ6NWY9 871 aaKnown RBP28.07■■■□□ 2.08
TSEN54-201ENST00000333213 VPS37DQ86XT2 251 aa28.07■■■□□ 2.08
TSEN54-201ENST00000333213 GGA1Q9UJY5 639 aa28.07■■■□□ 2.08
TSEN54-201ENST00000333213 C15orf52Q6ZUT6 534 aaKnown RBP28.06■■■□□ 2.08
TSEN54-201ENST00000333213 TICAM2Q86XR7 235 aa28.06■■■□□ 2.08
TSEN54-201ENST00000333213 DUOX1Q9NRD9 1551 aa28.06■■■□□ 2.08
TSEN54-201ENST00000333213 SGIP1Q9BQI5 828 aa28.06■■■□□ 2.08
TSEN54-201ENST00000333213 RNF113AO15541 343 aaKnown RBP28.05■■■□□ 2.08
TSEN54-201ENST00000333213 PTH1RQ03431 593 aa28.05■■■□□ 2.08
TSEN54-201ENST00000333213 TTF1Q15361 905 aaPredicted RBP28.05■■■□□ 2.08
TSEN54-201ENST00000333213 GNL3LQ9NVN8 582 aaKnown RBP28.05■■■□□ 2.08
TSEN54-201ENST00000333213 RAD50Q92878 1312 aa28.05■■■□□ 2.08
TSEN54-201ENST00000333213 KIF13BQ9NQT8 1826 aa28.05■■■□□ 2.08
TSEN54-201ENST00000333213 KCNA3P22001 575 aa28.04■■■□□ 2.08
TSEN54-201ENST00000333213 ZMYM1Q5SVZ6 1142 aa28.04■■■□□ 2.08
TSEN54-201ENST00000333213 CCDC129Q6ZRS4 1044 aa28.04■■■□□ 2.08
TSEN54-201ENST00000333213 C7orf43Q8WVR3 580 aa28.03■■■□□ 2.08
TSEN54-201ENST00000333213 CNKSR1Q969H4 720 aa28.03■■■□□ 2.08
TSEN54-201ENST00000333213 A0A0G2JLW4 131 aa28.02■■■□□ 2.08
TSEN54-201ENST00000333213 IDH1O75874 414 aaKnown RBP28.02■■■□□ 2.08
TSEN54-201ENST00000333213 MCMDC2Q4G0Z9 681 aa28.02■■■□□ 2.08
Retrieved 100 of 20,778 RNA–protein pairs in 73.1 ms