RNA–Protein interactions for RNA: ENST00000332682.8

TRIM49B-201, Transcript of tripartite motif containing 49B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM49B, Length 1,534 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM49B-201ENST00000332682 ZNF804BA4D1E1 1349 aa14.71□□□□□ -0.06
TRIM49B-201ENST00000332682 IRS2Q9Y4H2 1338 aa14.71□□□□□ -0.06
TRIM49B-201ENST00000332682 KLRK1P26718 216 aa14.71□□□□□ -0.06
TRIM49B-201ENST00000332682 ARID4AP29374 1257 aaPredicted RBP14.71□□□□□ -0.06
TRIM49B-201ENST00000332682 KCNJ4P48050 445 aa14.71□□□□□ -0.06
TRIM49B-201ENST00000332682 GPSM2P81274 684 aa14.71□□□□□ -0.06
TRIM49B-201ENST00000332682 SCARF1Q14162 830 aa14.71□□□□□ -0.06
TRIM49B-201ENST00000332682 SP8Q8IXZ3 490 aa14.71□□□□□ -0.06
TRIM49B-201ENST00000332682 EVI5LQ96CN4 794 aa14.71□□□□□ -0.06
TRIM49B-201ENST00000332682 ANKIB1Q9P2G1 1089 aa14.71□□□□□ -0.06
TRIM49B-201ENST00000332682 NDUFB9Q9Y6M9 179 aa14.71□□□□□ -0.06
TRIM49B-201ENST00000332682 PTGER2P43116 358 aa14.7□□□□□ -0.06
TRIM49B-201ENST00000332682 PRPF40BQ6NWY9 871 aaKnown RBP14.7□□□□□ -0.06
TRIM49B-201ENST00000332682 CNKSR1Q969H4 720 aa14.7□□□□□ -0.06
TRIM49B-201ENST00000332682 EDC3Q96F86 508 aaKnown RBP14.7□□□□□ -0.06
TRIM49B-201ENST00000332682 DNAJC2Q99543 621 aaKnown RBP14.7□□□□□ -0.06
TRIM49B-201ENST00000332682 PODXL2Q9NZ53 605 aa14.7□□□□□ -0.06
TRIM49B-201ENST00000332682 LEMD3Q9Y2U8 911 aa14.7□□□□□ -0.06
TRIM49B-201ENST00000332682 SEC24BO95487 1268 aa14.69□□□□□ -0.06
TRIM49B-201ENST00000332682 UQCRFS1P1P0C7P4 283 aa14.69□□□□□ -0.06
TRIM49B-201ENST00000332682 MCAMP43121 646 aa14.69□□□□□ -0.06
TRIM49B-201ENST00000332682 BCAMP50895 628 aa14.69□□□□□ -0.06
TRIM49B-201ENST00000332682 NSFL1CQ9UNZ2 370 aaKnown RBP14.69□□□□□ -0.06
TRIM49B-201ENST00000332682 CHMLP26374 656 aa14.68□□□□□ -0.06
TRIM49B-201ENST00000332682 GYG1P46976 350 aa14.68□□□□□ -0.06
TRIM49B-201ENST00000332682 OLFM4Q6UX06 510 aa14.68□□□□□ -0.06
TRIM49B-201ENST00000332682 PI16Q6UXB8 463 aa14.68□□□□□ -0.06
TRIM49B-201ENST00000332682 PAG1Q9NWQ8 432 aa14.68□□□□□ -0.06
TRIM49B-201ENST00000332682 BRCA1P38398 1863 aaKnown RBP14.68□□□□□ -0.06
TRIM49B-201ENST00000332682 RFX7Q2KHR2 1363 aa14.68□□□□□ -0.06
TRIM49B-201ENST00000332682 MYH13Q9UKX3 1938 aa14.67□□□□□ -0.06
TRIM49B-201ENST00000332682 GOLIM4O00461 696 aa14.67□□□□□ -0.06
TRIM49B-201ENST00000332682 UFL1O94874 794 aa14.67□□□□□ -0.06
TRIM49B-201ENST00000332682 DPEP1P16444 411 aa14.67□□□□□ -0.06
TRIM49B-201ENST00000332682 KCNA3P22001 575 aa14.67□□□□□ -0.06
TRIM49B-201ENST00000332682 ATP2B4P23634 1241 aa14.67□□□□□ -0.06
TRIM49B-201ENST00000332682 RASGRF1Q13972 1273 aa14.67□□□□□ -0.06
TRIM49B-201ENST00000332682 CAVIN4Q5BKX8 364 aa14.67□□□□□ -0.06
TRIM49B-201ENST00000332682 CASC1Q6TDU7 716 aa14.67□□□□□ -0.06
TRIM49B-201ENST00000332682 TXNRD3Q86VQ6 643 aa14.67□□□□□ -0.06
TRIM49B-201ENST00000332682 FAM84BQ96KN1 310 aaPredicted RBP14.67□□□□□ -0.06
TRIM49B-201ENST00000332682 SNRKQ9NRH2 765 aa14.67□□□□□ -0.06
TRIM49B-201ENST00000332682 GGA1Q9UJY5 639 aa14.67□□□□□ -0.06
TRIM49B-201ENST00000332682 COL1A1P02452 1464 aaPredicted RBP14.67□□□□□ -0.06
TRIM49B-201ENST00000332682 SNED1Q8TER0 1413 aa14.67□□□□□ -0.06
TRIM49B-201ENST00000332682 A0A0G2JLW4 131 aa14.66□□□□□ -0.06
TRIM49B-201ENST00000332682 ZAP70P43403 619 aa14.66□□□□□ -0.06
TRIM49B-201ENST00000332682 TGFB2P61812 414 aa14.66□□□□□ -0.06
TRIM49B-201ENST00000332682 FKBP4Q02790 459 aaKnown RBP eCLIP14.66□□□□□ -0.06
TRIM49B-201ENST00000332682 C15orf52Q6ZUT6 534 aaKnown RBP14.66□□□□□ -0.06
TRIM49B-201ENST00000332682 FBXO33Q7Z6M2 555 aa14.66□□□□□ -0.06
TRIM49B-201ENST00000332682 TBC1D16Q8TBP0 767 aa14.66□□□□□ -0.06
TRIM49B-201ENST00000332682 FSD1Q9BTV5 496 aa14.66□□□□□ -0.06
TRIM49B-201ENST00000332682 ANTXR1Q9H6X2 564 aa14.66□□□□□ -0.06
TRIM49B-201ENST00000332682 HMG20BQ9P0W2 317 aa14.66□□□□□ -0.06
TRIM49B-201ENST00000332682 POLLQ9UGP5 575 aa14.66□□□□□ -0.06
TRIM49B-201ENST00000332682 DOCK2Q92608 1830 aa14.66□□□□□ -0.06
TRIM49B-201ENST00000332682 KBTBD3Q8NAB2 608 aa14.66□□□□□ -0.06
TRIM49B-201ENST00000332682 C7orf43Q8WVR3 580 aa14.66□□□□□ -0.06
TRIM49B-201ENST00000332682 GPR101Q96P66 508 aaPredicted RBP14.66□□□□□ -0.06
TRIM49B-201ENST00000332682 MYH7P12883 1935 aa14.65□□□□□ -0.06
TRIM49B-201ENST00000332682 MED23Q9ULK4 1368 aa14.65□□□□□ -0.06
TRIM49B-201ENST00000332682 MYO5AQ9Y4I1 1855 aaKnown RBP14.65□□□□□ -0.06
TRIM49B-201ENST00000332682 VPS37DQ86XT2 251 aa14.65□□□□□ -0.06
TRIM49B-201ENST00000332682 MPNDQ8N594 471 aa14.65□□□□□ -0.06
TRIM49B-201ENST00000332682 TTLL6Q8N841 843 aa14.65□□□□□ -0.06
TRIM49B-201ENST00000332682 SPATA5Q8NB90 893 aa14.65□□□□□ -0.06
TRIM49B-201ENST00000332682 GNL3LQ9NVN8 582 aaKnown RBP14.65□□□□□ -0.06
TRIM49B-201ENST00000332682 CD2APQ9Y5K6 639 aa14.65□□□□□ -0.06
TRIM49B-201ENST00000332682 ZBTB22O15209 634 aa14.64□□□□□ -0.07
TRIM49B-201ENST00000332682 CYP2E1P05181 493 aaPredicted RBP14.64□□□□□ -0.07
TRIM49B-201ENST00000332682 HIBADHP31937 336 aaKnown RBP14.64□□□□□ -0.07
TRIM49B-201ENST00000332682 MFAP1P55081 439 aaKnown RBP14.64□□□□□ -0.07
TRIM49B-201ENST00000332682 DPP8Q6V1X1 898 aaPredicted RBP14.64□□□□□ -0.07
TRIM49B-201ENST00000332682 ESYT1Q9BSJ8 1104 aa14.64□□□□□ -0.07
TRIM49B-201ENST00000332682 TMX4Q9H1E5 349 aaPredicted RBP14.64□□□□□ -0.07
TRIM49B-201ENST00000332682 IL25Q9H293 177 aa14.64□□□□□ -0.07
TRIM49B-201ENST00000332682 SPON1Q9HCB6 807 aa14.64□□□□□ -0.07
TRIM49B-201ENST00000332682 DIAPH3Q9NSV4 1193 aa14.64□□□□□ -0.07
TRIM49B-201ENST00000332682 IQSEC3Q9UPP2 1182 aaPredicted RBP14.64□□□□□ -0.07
TRIM49B-201ENST00000332682 C6orf229H3BNL8 230 aa14.63□□□□□ -0.07
TRIM49B-201ENST00000332682 HIP1O00291 1037 aa14.63□□□□□ -0.07
TRIM49B-201ENST00000332682 SEMA3EO15041 775 aa14.63□□□□□ -0.07
TRIM49B-201ENST00000332682 TICAM2Q86XR7 235 aa14.63□□□□□ -0.07
TRIM49B-201ENST00000332682 PDS5AQ29RF7 1337 aaKnown RBP14.63□□□□□ -0.07
TRIM49B-201ENST00000332682 TTF1Q15361 905 aaPredicted RBP14.62□□□□□ -0.07
TRIM49B-201ENST00000332682 CC2D2BQ6DHV5 1058 aa14.62□□□□□ -0.07
TRIM49B-201ENST00000332682 CWC27Q6UX04 472 aaKnown RBP14.62□□□□□ -0.07
TRIM49B-201ENST00000332682 ZNF804AQ7Z570 1209 aa14.62□□□□□ -0.07
TRIM49B-201ENST00000332682 PIH1D3Q9NQM4 214 aaKnown RBP14.62□□□□□ -0.07
TRIM49B-201ENST00000332682 ZNF219Q9P2Y4 722 aaPredicted RBP14.62□□□□□ -0.07
TRIM49B-201ENST00000332682 PPP1R1BQ9UD71 204 aaPredicted RBP14.62□□□□□ -0.07
TRIM49B-201ENST00000332682 SGSM2O43147 1006 aa14.61□□□□□ -0.07
TRIM49B-201ENST00000332682 CHGBP05060 677 aa14.61□□□□□ -0.07
TRIM49B-201ENST00000332682 NMIQ13287 307 aaPredicted RBP14.61□□□□□ -0.07
TRIM49B-201ENST00000332682 KLHL34Q8N239 644 aa14.61□□□□□ -0.07
TRIM49B-201ENST00000332682 FAM227BQ96M60 508 aa14.61□□□□□ -0.07
TRIM49B-201ENST00000332682 PIM2Q9P1W9 311 aa14.61□□□□□ -0.07
TRIM49B-201ENST00000332682 DENND2AQ9ULE3 1009 aa14.61□□□□□ -0.07
TRIM49B-201ENST00000332682 A0A0D9SFI3 127 aa14.61□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms