RNA–Protein interactions for RNA: ENST00000332397.6

SPDYE3-201, Transcript of speedy/RINGO cell cycle regulator family member E3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPDYE3, Length 3,185 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPDYE3-201ENST00000332397 USPL1Q5W0Q7 1092 aa12.35□□□□□ -0.43
SPDYE3-201ENST00000332397 CADPS2Q86UW7 1296 aa12.35□□□□□ -0.43
SPDYE3-201ENST00000332397 NSUN7Q8NE18 718 aaKnown RBP12.35□□□□□ -0.43
SPDYE3-201ENST00000332397 USP28Q96RU2 1077 aa12.35□□□□□ -0.43
SPDYE3-201ENST00000332397 SMAP1Q8IYB5 467 aaPredicted RBP12.34□□□□□ -0.43
SPDYE3-201ENST00000332397 GOLGA6L6A8MZA4 724 aa12.34□□□□□ -0.43
SPDYE3-201ENST00000332397 RNF113AO15541 343 aaKnown RBP12.34□□□□□ -0.43
SPDYE3-201ENST00000332397 CTDNEP1O95476 244 aa12.34□□□□□ -0.43
SPDYE3-201ENST00000332397 SF3A1Q15459 793 aaKnown RBP12.34□□□□□ -0.43
SPDYE3-201ENST00000332397 CCDC158Q5M9N0 1113 aa12.34□□□□□ -0.43
SPDYE3-201ENST00000332397 CCDC144CPQ8IYA2 1237 aa12.34□□□□□ -0.43
SPDYE3-201ENST00000332397 CLSTN2Q9H4D0 955 aa12.34□□□□□ -0.43
SPDYE3-201ENST00000332397 DDX19AQ9NUU7 478 aaKnown RBP12.34□□□□□ -0.43
SPDYE3-201ENST00000332397 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.34□□□□□ -0.43
SPDYE3-201ENST00000332397 GOLGA6L19H0YKK7 550 aa12.34□□□□□ -0.43
SPDYE3-201ENST00000332397 ZAP70P43403 619 aa12.34□□□□□ -0.43
SPDYE3-201ENST00000332397 CCDC73Q6ZRK6 1079 aa12.34□□□□□ -0.43
SPDYE3-201ENST00000332397 DNAJC10Q8IXB1 793 aa12.34□□□□□ -0.43
SPDYE3-201ENST00000332397 ZNF592Q92610 1267 aa12.33□□□□□ -0.44
SPDYE3-201ENST00000332397 XAGE2Q96GT9 111 aa12.33□□□□□ -0.44
SPDYE3-201ENST00000332397 C16orf45Q96MC5 204 aaPredicted RBP12.33□□□□□ -0.44
SPDYE3-201ENST00000332397 CFAP45Q9UL16 551 aa12.33□□□□□ -0.44
SPDYE3-201ENST00000332397 ASAP1Q9ULH1 1129 aa12.33□□□□□ -0.44
SPDYE3-201ENST00000332397 USP54Q70EL1 1684 aa12.33□□□□□ -0.44
SPDYE3-201ENST00000332397 BECN2A8MW95 431 aa12.33□□□□□ -0.44
SPDYE3-201ENST00000332397 ISM2Q6H9L7 571 aa12.33□□□□□ -0.44
SPDYE3-201ENST00000332397 FSIP1Q8NA03 581 aa12.33□□□□□ -0.44
SPDYE3-201ENST00000332397 HELBQ8NG08 1087 aaPredicted RBP12.33□□□□□ -0.44
SPDYE3-201ENST00000332397 SECISBP2LQ93073 1101 aaKnown RBP12.33□□□□□ -0.44
SPDYE3-201ENST00000332397 GOLGA8BA8MQT2 603 aa12.32□□□□□ -0.44
SPDYE3-201ENST00000332397 TULP1O00294 542 aaPredicted RBP12.32□□□□□ -0.44
SPDYE3-201ENST00000332397 CPLX1O14810 134 aa12.32□□□□□ -0.44
SPDYE3-201ENST00000332397 IDH1O75874 414 aaKnown RBP12.32□□□□□ -0.44
SPDYE3-201ENST00000332397 METTL24Q5JXM2 366 aa12.32□□□□□ -0.44
SPDYE3-201ENST00000332397 ZMYM1Q5SVZ6 1142 aa12.32□□□□□ -0.44
SPDYE3-201ENST00000332397 C11orf57Q6ZUT1 292 aaPredicted RBP12.32□□□□□ -0.44
SPDYE3-201ENST00000332397 FILIP1Q7Z7B0 1213 aa12.32□□□□□ -0.44
SPDYE3-201ENST00000332397 GOLPH3LQ9H4A5 285 aa12.32□□□□□ -0.44
SPDYE3-201ENST00000332397 TMOD3Q9NYL9 352 aa12.32□□□□□ -0.44
SPDYE3-201ENST00000332397 DENND2AQ9ULE3 1009 aa12.32□□□□□ -0.44
SPDYE3-201ENST00000332397 ELP1O95163 1332 aa12.32□□□□□ -0.44
SPDYE3-201ENST00000332397 KLF18A0A0U1RQI7 1052 aa12.32□□□□□ -0.44
SPDYE3-201ENST00000332397 A0A1B0GVL5 298 aa12.32□□□□□ -0.44
SPDYE3-201ENST00000332397 BIN1O00499 593 aa12.32□□□□□ -0.44
SPDYE3-201ENST00000332397 PFKFB2O60825 505 aa12.32□□□□□ -0.44
SPDYE3-201ENST00000332397 KINO60870 393 aaKnown RBP12.32□□□□□ -0.44
SPDYE3-201ENST00000332397 TSGA10IPQ3SY00 556 aa12.32□□□□□ -0.44
SPDYE3-201ENST00000332397 MAP7D2Q96T17 732 aa12.32□□□□□ -0.44
SPDYE3-201ENST00000332397 PCDH11XQ9BZA7 1347 aa12.32□□□□□ -0.44
SPDYE3-201ENST00000332397 PCDH11YQ9BZA8 1340 aa12.32□□□□□ -0.44
SPDYE3-201ENST00000332397 PDIA3P30101 505 aaKnown RBP12.32□□□□□ -0.44
SPDYE3-201ENST00000332397 RALYLQ86SE5 291 aaKnown RBP12.32□□□□□ -0.44
SPDYE3-201ENST00000332397 SDF4Q9BRK5 362 aa12.32□□□□□ -0.44
SPDYE3-201ENST00000332397 CNNM1Q9NRU3 951 aa12.32□□□□□ -0.44
SPDYE3-201ENST00000332397 HELLSQ9NRZ9 838 aa12.32□□□□□ -0.44
SPDYE3-201ENST00000332397 CLIP2Q9UDT6 1046 aa12.32□□□□□ -0.44
SPDYE3-201ENST00000332397 SPATA31A3Q5VYP0 1347 aa12.32□□□□□ -0.44
SPDYE3-201ENST00000332397 IL2RBP14784 551 aa12.31□□□□□ -0.44
SPDYE3-201ENST00000332397 IFIT5Q13325 482 aaKnown RBP12.31□□□□□ -0.44
SPDYE3-201ENST00000332397 ARID5BQ14865 1188 aa12.31□□□□□ -0.44
SPDYE3-201ENST00000332397 CCDC191Q8NCU4 936 aa12.31□□□□□ -0.44
SPDYE3-201ENST00000332397 PUS7LQ9H0K6 701 aaKnown RBP12.31□□□□□ -0.44
SPDYE3-201ENST00000332397 CRYBG1Q9Y4K1 1723 aa12.31□□□□□ -0.44
SPDYE3-201ENST00000332397 MST1RQ04912 1400 aa12.31□□□□□ -0.44
SPDYE3-201ENST00000332397 SNAP23O00161 211 aa12.31□□□□□ -0.44
SPDYE3-201ENST00000332397 PRC1O43663 620 aa12.31□□□□□ -0.44
SPDYE3-201ENST00000332397 CHAF1AQ13111 956 aaPredicted RBP12.31□□□□□ -0.44
SPDYE3-201ENST00000332397 LDHAL6AQ6ZMR3 332 aa12.31□□□□□ -0.44
SPDYE3-201ENST00000332397 KIF6Q6ZMV9 814 aa12.31□□□□□ -0.44
SPDYE3-201ENST00000332397 SH3TC1Q8TE82 1336 aa12.31□□□□□ -0.44
SPDYE3-201ENST00000332397 HMGB1P09429 215 aaKnown RBP12.3□□□□□ -0.44
SPDYE3-201ENST00000332397 ZRSR1Q15695 479 aaKnown RBP12.3□□□□□ -0.44
SPDYE3-201ENST00000332397 IMMTQ16891 758 aaKnown RBP12.3□□□□□ -0.44
SPDYE3-201ENST00000332397 SAMD1Q6SPF0 538 aaPredicted RBP12.3□□□□□ -0.44
SPDYE3-201ENST00000332397 ZSCAN16Q9H4T2 348 aaPredicted RBP12.3□□□□□ -0.44
SPDYE3-201ENST00000332397 DYNC1I1O14576 645 aa12.3□□□□□ -0.44
SPDYE3-201ENST00000332397 FGAP02671 866 aa12.3□□□□□ -0.44
SPDYE3-201ENST00000332397 STK38Q15208 465 aa12.3□□□□□ -0.44
SPDYE3-201ENST00000332397 TOMM22Q9NS69 142 aa12.3□□□□□ -0.44
SPDYE3-201ENST00000332397 KIF3AQ9Y496 699 aa12.3□□□□□ -0.44
SPDYE3-201ENST00000332397 MAPK8IP2Q13387 824 aaPredicted RBP12.3□□□□□ -0.44
SPDYE3-201ENST00000332397 BRINP3Q76B58 766 aa12.3□□□□□ -0.44
SPDYE3-201ENST00000332397 KIAA1524Q8TCG1 905 aa12.3□□□□□ -0.44
SPDYE3-201ENST00000332397 C8orf76Q96K31 380 aa12.3□□□□□ -0.44
SPDYE3-201ENST00000332397 AIFM3Q96NN9 605 aa12.3□□□□□ -0.44
SPDYE3-201ENST00000332397 DSCC1Q9BVC3 393 aa12.3□□□□□ -0.44
SPDYE3-201ENST00000332397 TBC1D2BQ9UPU7 963 aa12.3□□□□□ -0.44
SPDYE3-201ENST00000332397 CDK11BP21127 795 aaKnown RBP12.29□□□□□ -0.44
SPDYE3-201ENST00000332397 ZNF75DP51815 510 aa12.29□□□□□ -0.44
SPDYE3-201ENST00000332397 HMGN5P82970 282 aaKnown RBP12.29□□□□□ -0.44
SPDYE3-201ENST00000332397 GNL2Q13823 731 aaKnown RBP12.29□□□□□ -0.44
SPDYE3-201ENST00000332397 HLFQ16534 295 aa12.29□□□□□ -0.44
SPDYE3-201ENST00000332397 INCENPQ9NQS7 918 aa12.29□□□□□ -0.44
SPDYE3-201ENST00000332397 ORC3Q9UBD5 711 aaPredicted RBP12.29□□□□□ -0.44
SPDYE3-201ENST00000332397 TNS3Q68CZ2 1445 aa12.29□□□□□ -0.44
SPDYE3-201ENST00000332397 AFDNP55196 1824 aaKnown RBP12.29□□□□□ -0.44
SPDYE3-201ENST00000332397 MARCKSP29966 332 aaPredicted RBP12.29□□□□□ -0.44
SPDYE3-201ENST00000332397 ATP2B3Q16720 1220 aa12.29□□□□□ -0.44
SPDYE3-201ENST00000332397 WDR17Q8IZU2 1322 aa12.29□□□□□ -0.44
SPDYE3-201ENST00000332397 MYRIPQ8NFW9 859 aa12.29□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms