RNA–Protein interactions for RNA: ENST00000332395.6

DDX28-201, Transcript of DEAD-box helicase 28, humanhuman

APPRIS P1 BASIC

Gene DDX28, Length 2,169 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX28-201ENST00000332395 SLIT2O94813 1529 aa20.63■□□□□ 0.89
DDX28-201ENST00000332395 CDC37L1Q7L3B6 337 aa20.63■□□□□ 0.89
DDX28-201ENST00000332395 DHX32Q7L7V1 743 aaKnown RBP20.63■□□□□ 0.89
DDX28-201ENST00000332395 VGLL2Q8N8G2 317 aa20.63■□□□□ 0.89
DDX28-201ENST00000332395 MARCH10Q8NA82 808 aaPredicted RBP20.63■□□□□ 0.89
DDX28-201ENST00000332395 CCDC87Q9NVE4 849 aa20.63■□□□□ 0.89
DDX28-201ENST00000332395 SPATA31A5Q5VU36 1347 aa20.62■□□□□ 0.89
DDX28-201ENST00000332395 SPATA31A7Q8IWB4 1347 aa20.62■□□□□ 0.89
DDX28-201ENST00000332395 HSP90B1P14625 803 aaKnown RBP20.62■□□□□ 0.89
DDX28-201ENST00000332395 ATP6V1AP38606 617 aa20.62■□□□□ 0.89
DDX28-201ENST00000332395 CSPP1Q1MSJ5 1256 aa20.62■□□□□ 0.89
DDX28-201ENST00000332395 BRF1Q92994 677 aa20.62■□□□□ 0.89
DDX28-201ENST00000332395 PPP1R9BQ96SB3 815 aa20.62■□□□□ 0.89
DDX28-201ENST00000332395 LRRC2Q9BYS8 371 aa20.62■□□□□ 0.89
DDX28-201ENST00000332395 A0A0G2JLW4 131 aa20.62■□□□□ 0.89
DDX28-201ENST00000332395 PHF14O94880 888 aa20.62■□□□□ 0.89
DDX28-201ENST00000332395 CRKLP46109 303 aaKnown RBP20.62■□□□□ 0.89
DDX28-201ENST00000332395 FGD1P98174 961 aa20.62■□□□□ 0.89
DDX28-201ENST00000332395 WASHC4Q2M389 1173 aa20.62■□□□□ 0.89
DDX28-201ENST00000332395 PI16Q6UXB8 463 aa20.62■□□□□ 0.89
DDX28-201ENST00000332395 E7EWF7 191 aa20.61■□□□□ 0.89
DDX28-201ENST00000332395 TRIM44Q96DX7 344 aaPredicted RBP20.61■□□□□ 0.89
DDX28-201ENST00000332395 LOC102724428A0A0B4J2F2 783 aa20.61■□□□□ 0.89
DDX28-201ENST00000332395 NUTM2BA6NNL0 878 aaPredicted RBP20.61■□□□□ 0.89
DDX28-201ENST00000332395 NUTM2EB1AL46 878 aaPredicted RBP20.61■□□□□ 0.89
DDX28-201ENST00000332395 MCAMP43121 646 aa20.61■□□□□ 0.89
DDX28-201ENST00000332395 SIK1P57059 783 aa20.61■□□□□ 0.89
DDX28-201ENST00000332395 NUTM2AQ8IVF1 878 aaPredicted RBP20.61■□□□□ 0.89
DDX28-201ENST00000332395 LRP5O75197 1615 aa20.6■□□□□ 0.89
DDX28-201ENST00000332395 PDE8BO95263 885 aa20.6■□□□□ 0.89
DDX28-201ENST00000332395 APPBP2Q92624 585 aa20.6■□□□□ 0.89
DDX28-201ENST00000332395 MYH7P12883 1935 aa20.6■□□□□ 0.89
DDX28-201ENST00000332395 AKAP11Q9UKA4 1901 aa20.59■□□□□ 0.89
DDX28-201ENST00000332395 JAK2O60674 1132 aa20.59■□□□□ 0.89
DDX28-201ENST00000332395 EXOSC10Q01780 885 aaKnown RBP20.59■□□□□ 0.89
DDX28-201ENST00000332395 GLIPR1L2Q4G1C9 344 aa20.59■□□□□ 0.89
DDX28-201ENST00000332395 FERMT3Q86UX7 667 aa20.59■□□□□ 0.89
DDX28-201ENST00000332395 ZNF512BQ96KM6 892 aaPredicted RBP20.59■□□□□ 0.89
DDX28-201ENST00000332395 AK7Q96M32 723 aa20.59■□□□□ 0.89
DDX28-201ENST00000332395 RREB1Q92766 1687 aa20.59■□□□□ 0.89
DDX28-201ENST00000332395 SUSD4Q5VX71 490 aa20.59■□□□□ 0.89
DDX28-201ENST00000332395 TTLL5Q6EMB2 1281 aa20.59■□□□□ 0.89
DDX28-201ENST00000332395 AGXT2Q9BYV1 514 aa20.59■□□□□ 0.89
DDX28-201ENST00000332395 NWD2Q9ULI1 1742 aa20.59■□□□□ 0.89
DDX28-201ENST00000332395 ESPNB1AK53 854 aa20.58■□□□□ 0.89
DDX28-201ENST00000332395 FOXP2O15409 715 aa20.58■□□□□ 0.89
DDX28-201ENST00000332395 SCRN1Q12765 414 aa20.58■□□□□ 0.89
DDX28-201ENST00000332395 ITPK1Q13572 414 aa20.58■□□□□ 0.89
DDX28-201ENST00000332395 CCDC183Q5T5S1 534 aa20.58■□□□□ 0.89
DDX28-201ENST00000332395 BARGINQ6ZT62 677 aa20.58■□□□□ 0.89
DDX28-201ENST00000332395 CICQ96RK0 1608 aaPredicted RBP20.58■□□□□ 0.88
DDX28-201ENST00000332395 PFKFB2O60825 505 aa20.58■□□□□ 0.88
DDX28-201ENST00000332395 PUS7LQ9H0K6 701 aaKnown RBP20.58■□□□□ 0.88
DDX28-201ENST00000332395 TSPY26PQ9H489 355 aa20.58■□□□□ 0.88
DDX28-201ENST00000332395 CTNNA3Q9UI47 895 aa20.58■□□□□ 0.88
DDX28-201ENST00000332395 KRT85P78386 507 aa20.57■□□□□ 0.88
DDX28-201ENST00000332395 TPRNQ4KMQ1 711 aa20.57■□□□□ 0.88
DDX28-201ENST00000332395 DDX24Q9GZR7 859 aaKnown RBP eCLIP20.57■□□□□ 0.88
DDX28-201ENST00000332395 CAMTA2O94983 1202 aa20.56■□□□□ 0.88
DDX28-201ENST00000332395 HCLS1P14317 486 aaPredicted RBP20.56■□□□□ 0.88
DDX28-201ENST00000332395 MROH5Q6ZUA9 1318 aa20.56■□□□□ 0.88
DDX28-201ENST00000332395 RRP9O43818 475 aaKnown RBP20.56■□□□□ 0.88
DDX28-201ENST00000332395 APOBRQ0VD83 1088 aa20.56■□□□□ 0.88
DDX28-201ENST00000332395 LLPHQ9BRT6 129 aaKnown RBP20.56■□□□□ 0.88
DDX28-201ENST00000332395 UTP14AQ9BVJ6 771 aaKnown RBP20.56■□□□□ 0.88
DDX28-201ENST00000332395 MYH14Q7Z406 1995 aaKnown RBP20.56■□□□□ 0.88
DDX28-201ENST00000332395 FAM177BA6PVY3 158 aa20.55■□□□□ 0.88
DDX28-201ENST00000332395 PUM3Q15397 648 aaKnown RBP20.55■□□□□ 0.88
DDX28-201ENST00000332395 IMMTQ16891 758 aaKnown RBP20.55■□□□□ 0.88
DDX28-201ENST00000332395 CCDC102BQ68D86 513 aa20.55■□□□□ 0.88
DDX28-201ENST00000332395 GPAA1O43292 621 aa20.55■□□□□ 0.88
DDX28-201ENST00000332395 FGAP02671 866 aa20.55■□□□□ 0.88
DDX28-201ENST00000332395 TTF1Q15361 905 aaPredicted RBP20.55■□□□□ 0.88
DDX28-201ENST00000332395 ZSCAN25Q6NSZ9 544 aa20.55■□□□□ 0.88
DDX28-201ENST00000332395 FAM173BQ6P4H8 233 aa20.55■□□□□ 0.88
DDX28-201ENST00000332395 SMARCC2Q8TAQ2 1214 aa20.55■□□□□ 0.88
DDX28-201ENST00000332395 LPIN2Q92539 896 aa20.55■□□□□ 0.88
DDX28-201ENST00000332395 ARID4AP29374 1257 aaPredicted RBP20.54■□□□□ 0.88
DDX28-201ENST00000332395 ADD2P35612 726 aa20.54■□□□□ 0.88
DDX28-201ENST00000332395 PHKA1P46020 1223 aa20.54■□□□□ 0.88
DDX28-201ENST00000332395 PARP10Q53GL7 1025 aa20.54■□□□□ 0.88
DDX28-201ENST00000332395 RNF214Q8ND24 703 aa20.54■□□□□ 0.88
DDX28-201ENST00000332395 DDX11Q96FC9 970 aa20.54■□□□□ 0.88
DDX28-201ENST00000332395 ARAP2Q8WZ64 1704 aa20.54■□□□□ 0.88
DDX28-201ENST00000332395 LETM1O95202 739 aaPredicted RBP20.53■□□□□ 0.88
DDX28-201ENST00000332395 FGFR2P21802 821 aa20.53■□□□□ 0.88
DDX28-201ENST00000332395 HSP90AA2PQ14568 343 aaPredicted RBP20.53■□□□□ 0.88
DDX28-201ENST00000332395 CHST3Q7LGC8 479 aa20.53■□□□□ 0.88
DDX28-201ENST00000332395 TTC6Q86TZ1 520 aa20.53■□□□□ 0.88
DDX28-201ENST00000332395 HELBQ8NG08 1087 aaPredicted RBP20.53■□□□□ 0.88
DDX28-201ENST00000332395 ELP1O95163 1332 aa20.53■□□□□ 0.88
DDX28-201ENST00000332395 ATRNO75882 1429 aa20.53■□□□□ 0.88
DDX28-201ENST00000332395 HAND2P61296 217 aa20.53■□□□□ 0.88
DDX28-201ENST00000332395 PIP4K2BP78356 416 aa20.53■□□□□ 0.88
DDX28-201ENST00000332395 SLC9C2Q5TAH2 1124 aa20.53■□□□□ 0.88
DDX28-201ENST00000332395 DDX60Q8IY21 1712 aaKnown RBP20.53■□□□□ 0.88
DDX28-201ENST00000332395 FAM184AQ8NB25 1140 aa20.53■□□□□ 0.88
DDX28-201ENST00000332395 NSUN7Q8NE18 718 aaKnown RBP20.53■□□□□ 0.88
DDX28-201ENST00000332395 UQCRFS1P1P0C7P4 283 aa20.52■□□□□ 0.88
DDX28-201ENST00000332395 SMARCC1Q92922 1105 aaPredicted RBP20.52■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms