RNA–Protein interactions for RNA: ENST00000330588.4

SMG1-201, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 5 BASIC

Gene SMG1, Length 1,588 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-201ENST00000330588 NUDT12Q9BQG2 462 aa8.34□□□□□ -1.07
SMG1-201ENST00000330588 PRKRIP1Q9H875 184 aaPredicted RBP8.34□□□□□ -1.07
SMG1-201ENST00000330588 AFDNP55196 1824 aaKnown RBP8.34□□□□□ -1.07
SMG1-201ENST00000330588 ERBB4Q15303 1308 aa8.34□□□□□ -1.08
SMG1-201ENST00000330588 ADCY9O60503 1353 aa8.33□□□□□ -1.08
SMG1-201ENST00000330588 WFS1O76024 890 aa8.33□□□□□ -1.08
SMG1-201ENST00000330588 SSTR3P32745 418 aaPredicted RBP8.33□□□□□ -1.08
SMG1-201ENST00000330588 MCM10Q7L590 875 aa8.33□□□□□ -1.08
SMG1-201ENST00000330588 SPIRE2Q8WWL2 714 aa8.33□□□□□ -1.08
SMG1-201ENST00000330588 TRIM47Q96LD4 638 aa8.33□□□□□ -1.08
SMG1-201ENST00000330588 SRP68Q9UHB9 627 aaKnown RBP8.33□□□□□ -1.08
SMG1-201ENST00000330588 N4BP2Q86UW6 1770 aaPredicted RBP8.33□□□□□ -1.08
SMG1-201ENST00000330588 SNRPBP14678 240 aaKnown RBP8.32□□□□□ -1.08
SMG1-201ENST00000330588 DDR1Q08345 913 aa8.32□□□□□ -1.08
SMG1-201ENST00000330588 USPL1Q5W0Q7 1092 aa8.32□□□□□ -1.08
SMG1-201ENST00000330588 CARMIL3Q8ND23 1372 aa8.32□□□□□ -1.08
SMG1-201ENST00000330588 TMPOP42166 694 aaKnown RBP8.31□□□□□ -1.08
SMG1-201ENST00000330588 TTLL12Q14166 644 aaPredicted RBP8.31□□□□□ -1.08
SMG1-201ENST00000330588 NFIXQ14938 502 aa8.31□□□□□ -1.08
SMG1-201ENST00000330588 NPM2Q86SE8 214 aaKnown RBP8.31□□□□□ -1.08
SMG1-201ENST00000330588 ZNF784Q8NCA9 323 aaPredicted RBP8.31□□□□□ -1.08
SMG1-201ENST00000330588 RUNDC1Q96C34 613 aa8.31□□□□□ -1.08
SMG1-201ENST00000330588 SENP2Q9HC62 589 aa8.31□□□□□ -1.08
SMG1-201ENST00000330588 KCNQ3O43525 872 aa8.31□□□□□ -1.08
SMG1-201ENST00000330588 CAMTA2O94983 1202 aa8.31□□□□□ -1.08
SMG1-201ENST00000330588 KCNA3P22001 575 aa8.31□□□□□ -1.08
SMG1-201ENST00000330588 CANXP27824 592 aaKnown RBP8.31□□□□□ -1.08
SMG1-201ENST00000330588 EIF4A1P60842 406 aaKnown RBP8.31□□□□□ -1.08
SMG1-201ENST00000330588 WDR43Q15061 677 aaKnown RBP eCLIP8.31□□□□□ -1.08
SMG1-201ENST00000330588 GIGYF2Q6Y7W6 1299 aaKnown RBP8.31□□□□□ -1.08
SMG1-201ENST00000330588 PIM2Q9P1W9 311 aa8.31□□□□□ -1.08
SMG1-201ENST00000330588 ZNF652Q9Y2D9 606 aa8.31□□□□□ -1.08
SMG1-201ENST00000330588 USP16Q9Y5T5 823 aa8.31□□□□□ -1.08
SMG1-201ENST00000330588 IBTKQ9P2D0 1353 aaPredicted RBP8.3□□□□□ -1.08
SMG1-201ENST00000330588 RIC1Q4ADV7 1423 aa8.3□□□□□ -1.08
SMG1-201ENST00000330588 ARFGEF2Q9Y6D5 1785 aa8.3□□□□□ -1.08
SMG1-201ENST00000330588 ERVV-1B6SEH8 477 aa8.3□□□□□ -1.08
SMG1-201ENST00000330588 WIPF1O43516 503 aa8.3□□□□□ -1.08
SMG1-201ENST00000330588 GIGYF1O75420 1035 aaPredicted RBP8.3□□□□□ -1.08
SMG1-201ENST00000330588 SERPINB2P05120 415 aa8.3□□□□□ -1.08
SMG1-201ENST00000330588 CCNYL3P0C7X3 344 aa8.3□□□□□ -1.08
SMG1-201ENST00000330588 DCTN1Q14203 1278 aa8.3□□□□□ -1.08
SMG1-201ENST00000330588 PTPRNQ16849 979 aa8.3□□□□□ -1.08
SMG1-201ENST00000330588 LCE2CQ5TA81 110 aa8.3□□□□□ -1.08
SMG1-201ENST00000330588 FAM117AQ9C073 453 aa8.3□□□□□ -1.08
SMG1-201ENST00000330588 ATP10DQ9P241 1426 aa8.29□□□□□ -1.08
SMG1-201ENST00000330588 C6orf229H3BNL8 230 aa8.29□□□□□ -1.08
SMG1-201ENST00000330588 A1BGP04217 495 aa8.29□□□□□ -1.08
SMG1-201ENST00000330588 HOXB7P09629 217 aa8.29□□□□□ -1.08
SMG1-201ENST00000330588 MS4A1P11836 297 aa8.29□□□□□ -1.08
SMG1-201ENST00000330588 DPEP1P16444 411 aa8.29□□□□□ -1.08
SMG1-201ENST00000330588 RIPK4P57078 832 aa8.29□□□□□ -1.08
SMG1-201ENST00000330588 DZIP3Q86Y13 1208 aaKnown RBP8.29□□□□□ -1.08
SMG1-201ENST00000330588 ZC3H4Q9UPT8 1303 aaKnown RBP8.29□□□□□ -1.08
SMG1-201ENST00000330588 ANKRD31Q8N7Z5 1873 aa8.28□□□□□ -1.08
SMG1-201ENST00000330588 A0A0G2JLW4 131 aa8.28□□□□□ -1.08
SMG1-201ENST00000330588 MOXD2PA6NHM9 499 aa8.28□□□□□ -1.08
SMG1-201ENST00000330588 ALDH1A1P00352 501 aa8.28□□□□□ -1.08
SMG1-201ENST00000330588 NDUFV2P19404 249 aa8.28□□□□□ -1.08
SMG1-201ENST00000330588 PDE6BP35913 854 aa8.28□□□□□ -1.08
SMG1-201ENST00000330588 SH3BP2P78314 561 aa8.28□□□□□ -1.08
SMG1-201ENST00000330588 KIFC2Q96AC6 838 aa8.28□□□□□ -1.08
SMG1-201ENST00000330588 BRIP1Q9BX63 1249 aa8.28□□□□□ -1.08
SMG1-201ENST00000330588 EVA1BQ9NVM1 165 aa8.28□□□□□ -1.08
SMG1-201ENST00000330588 CHL1O00533 1208 aa8.27□□□□□ -1.09
SMG1-201ENST00000330588 CALD1Q05682 793 aaKnown RBP8.27□□□□□ -1.09
SMG1-201ENST00000330588 DALRD3Q5D0E6 543 aaKnown RBP8.27□□□□□ -1.09
SMG1-201ENST00000330588 TBC1D9BQ66K14 1250 aa8.27□□□□□ -1.09
SMG1-201ENST00000330588 DESI1Q6ICB0 168 aa8.27□□□□□ -1.09
SMG1-201ENST00000330588 NBPF10Q6P3W6 841 aaKnown RBP8.27□□□□□ -1.09
SMG1-201ENST00000330588 NBPF15Q8N660 670 aa8.27□□□□□ -1.09
SMG1-201ENST00000330588 SETDB2Q96T68 719 aa8.27□□□□□ -1.09
SMG1-201ENST00000330588 SRCAPQ6ZRS2 3230 aa8.27□□□□□ -1.09
SMG1-201ENST00000330588 KLRG2A4D1S0 409 aaPredicted RBP8.27□□□□□ -1.09
SMG1-201ENST00000330588 TERTO14746 1132 aaKnown RBP8.27□□□□□ -1.09
SMG1-201ENST00000330588 GJA5P36382 358 aa8.27□□□□□ -1.09
SMG1-201ENST00000330588 EHBP1Q8NDI1 1231 aa8.27□□□□□ -1.09
SMG1-201ENST00000330588 IL27Q8NEV9 243 aa8.27□□□□□ -1.09
SMG1-201ENST00000330588 CHMP4AQ9BY43 222 aa8.27□□□□□ -1.09
SMG1-201ENST00000330588 TSPYL4Q9UJ04 414 aa8.27□□□□□ -1.09
SMG1-201ENST00000330588 ADAMTS8Q9UP79 889 aa8.27□□□□□ -1.09
SMG1-201ENST00000330588 TBC1D2BQ9UPU7 963 aa8.27□□□□□ -1.09
SMG1-201ENST00000330588 BCS1LQ9Y276 419 aa8.27□□□□□ -1.09
SMG1-201ENST00000330588 PRAMEF22A3QJZ6 481 aa8.26□□□□□ -1.09
SMG1-201ENST00000330588 H0YIN7 160 aa8.26□□□□□ -1.09
SMG1-201ENST00000330588 COL11A2P13942 1736 aaPredicted RBP8.26□□□□□ -1.09
SMG1-201ENST00000330588 NUP98P52948 1817 aa8.26□□□□□ -1.09
SMG1-201ENST00000330588 ST5P78524 1137 aa8.26□□□□□ -1.09
SMG1-201ENST00000330588 RNF123Q5XPI4 1314 aa8.26□□□□□ -1.09
SMG1-201ENST00000330588 STYK1Q6J9G0 422 aa8.26□□□□□ -1.09
SMG1-201ENST00000330588 PRR5LQ6MZQ0 368 aa8.26□□□□□ -1.09
SMG1-201ENST00000330588 MAP3K15Q6ZN16 1313 aa8.26□□□□□ -1.09
SMG1-201ENST00000330588 TTLL6Q8N841 843 aa8.26□□□□□ -1.09
SMG1-201ENST00000330588 CNBD1Q8NA66 436 aa8.26□□□□□ -1.09
SMG1-201ENST00000330588 UNC93B1Q9H1C4 597 aa8.26□□□□□ -1.09
SMG1-201ENST00000330588 LTBP3Q9NS15 1303 aa8.26□□□□□ -1.09
SMG1-201ENST00000330588 SPDYE5A6NIY4 337 aa8.25□□□□□ -1.09
SMG1-201ENST00000330588 KCNH2Q12809 1159 aa8.25□□□□□ -1.09
SMG1-201ENST00000330588 CCDC27Q2M243 656 aa8.25□□□□□ -1.09
SMG1-201ENST00000330588 SOGA3Q5TF21 947 aa8.25□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 145.7 ms