RNA–Protein interactions for RNA: ENST00000329913.3

GDF3-201, Transcript of growth differentiation factor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GDF3, Length 1,239 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GDF3-201ENST00000329913 PRKG1Q13976 671 aa12.17□□□□□ -0.46
GDF3-201ENST00000329913 RSBN1LQ6PCB5 846 aaPredicted RBP12.17□□□□□ -0.46
GDF3-201ENST00000329913 C8orf58Q8NAV2 365 aa12.17□□□□□ -0.46
GDF3-201ENST00000329913 HYPKQ9NX55 129 aa12.17□□□□□ -0.46
GDF3-201ENST00000329913 FZD1Q9UP38 647 aa12.17□□□□□ -0.46
GDF3-201ENST00000329913 APAF1O14727 1248 aa12.16□□□□□ -0.46
GDF3-201ENST00000329913 SASH1O94885 1247 aa12.16□□□□□ -0.46
GDF3-201ENST00000329913 KLRK1P26718 216 aa12.16□□□□□ -0.46
GDF3-201ENST00000329913 NBPF9Q3BBW0 867 aa12.16□□□□□ -0.46
GDF3-201ENST00000329913 ZBTB38Q8NAP3 1195 aaPredicted RBP12.16□□□□□ -0.46
GDF3-201ENST00000329913 PDE4DIPQ5VU43 2346 aa12.15□□□□□ -0.46
GDF3-201ENST00000329913 ZNF316A6NFI3 1004 aaPredicted RBP12.15□□□□□ -0.46
GDF3-201ENST00000329913 TBC1D8O95759 1140 aa12.15□□□□□ -0.46
GDF3-201ENST00000329913 CCDC152Q4G0S7 254 aa12.15□□□□□ -0.46
GDF3-201ENST00000329913 TSPYL6Q8N831 410 aa12.15□□□□□ -0.46
GDF3-201ENST00000329913 TSR2Q969E8 191 aaKnown RBP12.15□□□□□ -0.46
GDF3-201ENST00000329913 CCDC102AQ96A19 550 aa12.15□□□□□ -0.46
GDF3-201ENST00000329913 MYOZ2Q9NPC6 264 aa12.15□□□□□ -0.46
GDF3-201ENST00000329913 PCCAP05165 728 aaPredicted RBP12.14□□□□□ -0.47
GDF3-201ENST00000329913 HOXB7P09629 217 aa12.14□□□□□ -0.47
GDF3-201ENST00000329913 USP17L8P0C7I0 530 aa12.14□□□□□ -0.47
GDF3-201ENST00000329913 PRKAR2AP13861 404 aaKnown RBP12.14□□□□□ -0.47
GDF3-201ENST00000329913 ZNF280AP59817 542 aaPredicted RBP12.14□□□□□ -0.47
GDF3-201ENST00000329913 TTLL12Q14166 644 aaPredicted RBP12.14□□□□□ -0.47
GDF3-201ENST00000329913 CWF19L2Q2TBE0 894 aaKnown RBP12.14□□□□□ -0.47
GDF3-201ENST00000329913 TXNRD3Q86VQ6 643 aa12.14□□□□□ -0.47
GDF3-201ENST00000329913 GREM2Q9H772 168 aa12.14□□□□□ -0.47
GDF3-201ENST00000329913 CWC25Q9NXE8 425 aaPredicted RBP12.14□□□□□ -0.47
GDF3-201ENST00000329913 PODXL2Q9NZ53 605 aa12.14□□□□□ -0.47
GDF3-201ENST00000329913 MAP3K2Q9Y2U5 619 aa12.14□□□□□ -0.47
GDF3-201ENST00000329913 SNAP23O00161 211 aa12.13□□□□□ -0.47
GDF3-201ENST00000329913 PDE8AO60658 829 aa12.13□□□□□ -0.47
GDF3-201ENST00000329913 IGKV5-2P06315 115 aa12.13□□□□□ -0.47
GDF3-201ENST00000329913 ZNF853P0CG23 659 aa12.13□□□□□ -0.47
GDF3-201ENST00000329913 NUBP1P53384 320 aa12.13□□□□□ -0.47
GDF3-201ENST00000329913 CTSWP56202 376 aa12.13□□□□□ -0.47
GDF3-201ENST00000329913 TRIM28Q13263 835 aaKnown RBP12.13□□□□□ -0.47
GDF3-201ENST00000329913 G2E3Q7L622 706 aa12.13□□□□□ -0.47
GDF3-201ENST00000329913 ANKRD18AQ8IVF6 992 aa12.13□□□□□ -0.47
GDF3-201ENST00000329913 PIP4P2Q8N4L2 257 aa12.13□□□□□ -0.47
GDF3-201ENST00000329913 GMLQ99445 158 aa12.13□□□□□ -0.47
GDF3-201ENST00000329913 R3HDMLQ9H3Y0 253 aa12.13□□□□□ -0.47
GDF3-201ENST00000329913 SAGE1Q9NXZ1 904 aa12.13□□□□□ -0.47
GDF3-201ENST00000329913 HTTP42858 3142 aa12.13□□□□□ -0.47
GDF3-201ENST00000329913 XDHP47989 1333 aa12.12□□□□□ -0.47
GDF3-201ENST00000329913 USP17L3A6NCW0 530 aa12.12□□□□□ -0.47
GDF3-201ENST00000329913 USP17L4A6NCW7 530 aa12.12□□□□□ -0.47
GDF3-201ENST00000329913 USP17L1Q7RTZ2 530 aa12.12□□□□□ -0.47
GDF3-201ENST00000329913 CTU1Q7Z7A3 348 aaKnown RBP12.12□□□□□ -0.47
GDF3-201ENST00000329913 METTL22Q9BUU2 404 aaPredicted RBP12.12□□□□□ -0.47
GDF3-201ENST00000329913 PCDHAC2Q9Y5I4 1007 aa12.12□□□□□ -0.47
GDF3-201ENST00000329913 PAPPA2Q9BXP8 1791 aa12.12□□□□□ -0.47
GDF3-201ENST00000329913 AKAP11Q9UKA4 1901 aa12.11□□□□□ -0.47
GDF3-201ENST00000329913 PI4KAP2A4QPH2 592 aa12.11□□□□□ -0.47
GDF3-201ENST00000329913 PI4KAP1Q8N8J0 262 aa12.11□□□□□ -0.47
GDF3-201ENST00000329913 CCDC191Q8NCU4 936 aa12.11□□□□□ -0.47
GDF3-201ENST00000329913 AGBL3Q8NEM8 1001 aa12.11□□□□□ -0.47
GDF3-201ENST00000329913 ZNF296Q8WUU4 475 aaPredicted RBP12.11□□□□□ -0.47
GDF3-201ENST00000329913 IFT57Q9NWB7 429 aa12.11□□□□□ -0.47
GDF3-201ENST00000329913 HPS5Q9UPZ3 1129 aa12.11□□□□□ -0.47
GDF3-201ENST00000329913 JAG2Q9Y219 1238 aa12.11□□□□□ -0.47
GDF3-201ENST00000329913 ZNF646O15015 1829 aaPredicted RBP12.11□□□□□ -0.47
GDF3-201ENST00000329913 CENPFP49454 3210 aa12.1□□□□□ -0.47
GDF3-201ENST00000329913 PSME4Q14997 1843 aa12.1□□□□□ -0.47
GDF3-201ENST00000329913 ATP2B4P23634 1241 aa12.1□□□□□ -0.47
GDF3-201ENST00000329913 DACT2Q5SW24 774 aa12.1□□□□□ -0.47
GDF3-201ENST00000329913 UBE3BQ7Z3V4 1068 aa12.1□□□□□ -0.47
GDF3-201ENST00000329913 KIAA0825Q8IV33 1275 aa12.1□□□□□ -0.47
GDF3-201ENST00000329913 TTLL11Q8NHH1 800 aa12.1□□□□□ -0.47
GDF3-201ENST00000329913 MINPP1Q9UNW1 487 aa12.1□□□□□ -0.47
GDF3-201ENST00000329913 AOX1Q06278 1338 aa12.1□□□□□ -0.47
GDF3-201ENST00000329913 MKI67P46013 3256 aaKnown RBP12.09□□□□□ -0.47
GDF3-201ENST00000329913 CCT4P50991 539 aaKnown RBP12.09□□□□□ -0.47
GDF3-201ENST00000329913 GNAI1P63096 354 aa12.09□□□□□ -0.47
GDF3-201ENST00000329913 PTPN12Q05209 780 aaKnown RBP12.09□□□□□ -0.47
GDF3-201ENST00000329913 CCDC184Q52MB2 194 aa12.09□□□□□ -0.47
GDF3-201ENST00000329913 HDAC9Q9UKV0 1011 aa12.09□□□□□ -0.47
GDF3-201ENST00000329913 FARP1Q9Y4F1 1045 aaPredicted RBP12.09□□□□□ -0.47
GDF3-201ENST00000329913 MED23Q9ULK4 1368 aa12.08□□□□□ -0.48
GDF3-201ENST00000329913 F8W031 263 aaPredicted RBP12.08□□□□□ -0.48
GDF3-201ENST00000329913 WNT10BO00744 389 aa12.08□□□□□ -0.48
GDF3-201ENST00000329913 HELBQ8NG08 1087 aaPredicted RBP12.08□□□□□ -0.48
GDF3-201ENST00000329913 CDC5LQ99459 802 aaKnown RBP12.08□□□□□ -0.48
GDF3-201ENST00000329913 NEURL1BA8MQ27 555 aa12.07□□□□□ -0.48
GDF3-201ENST00000329913 TAF5LO75529 589 aa12.07□□□□□ -0.48
GDF3-201ENST00000329913 DDX58O95786 925 aaKnown RBP12.07□□□□□ -0.48
GDF3-201ENST00000329913 GTF2IP78347 998 aa12.07□□□□□ -0.48
GDF3-201ENST00000329913 CCDC30Q5VVM6 783 aa12.07□□□□□ -0.48
GDF3-201ENST00000329913 KSR2Q6VAB6 950 aa12.07□□□□□ -0.48
GDF3-201ENST00000329913 PODNQ7Z5L7 613 aa12.07□□□□□ -0.48
GDF3-201ENST00000329913 PRKRIP1Q9H875 184 aaPredicted RBP12.07□□□□□ -0.48
GDF3-201ENST00000329913 BRCA2P51587 3418 aa12.07□□□□□ -0.48
GDF3-201ENST00000329913 PITPNM2Q9BZ72 1349 aa12.07□□□□□ -0.48
GDF3-201ENST00000329913 ZNF609O15014 1411 aa12.06□□□□□ -0.48
GDF3-201ENST00000329913 CLRN2A0PK11 232 aa12.06□□□□□ -0.48
GDF3-201ENST00000329913 GPR25O00155 361 aa12.06□□□□□ -0.48
GDF3-201ENST00000329913 ITGA6P23229 1130 aa12.06□□□□□ -0.48
GDF3-201ENST00000329913 CLMNQ96JQ2 1002 aa12.06□□□□□ -0.48
GDF3-201ENST00000329913 BSDC1Q9NW68 430 aaPredicted RBP12.06□□□□□ -0.48
GDF3-201ENST00000329913 ANGEL1Q9UNK9 670 aaKnown RBP12.06□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms