RNA–Protein interactions for RNA: ENST00000328863.8

CLRN1-203, Transcript of clarin 1, humanhuman

TSL 1 (best) BASIC

Gene CLRN1, Length 738 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLRN1-203ENST00000328863 PUS3Q9BZE2 481 aaKnown RBP18.48■□□□□ 0.55
CLRN1-203ENST00000328863 GPRC5DQ9NZD1 345 aa18.48■□□□□ 0.55
CLRN1-203ENST00000328863 EYA2O00167 538 aa18.47■□□□□ 0.55
CLRN1-203ENST00000328863 SRGAP3O43295 1099 aa18.47■□□□□ 0.55
CLRN1-203ENST00000328863 KLRK1P26718 216 aa18.47■□□□□ 0.55
CLRN1-203ENST00000328863 RFX5P48382 616 aaPredicted RBP18.47■□□□□ 0.55
CLRN1-203ENST00000328863 PTPN12Q05209 780 aaKnown RBP18.47■□□□□ 0.55
CLRN1-203ENST00000328863 UBE4AQ14139 1066 aa18.47■□□□□ 0.55
CLRN1-203ENST00000328863 EAPPQ56P03 285 aaPredicted RBP18.47■□□□□ 0.55
CLRN1-203ENST00000328863 C15orf52Q6ZUT6 534 aaKnown RBP18.47■□□□□ 0.55
CLRN1-203ENST00000328863 RIPOR2Q9Y4F9 1068 aa18.47■□□□□ 0.55
CLRN1-203ENST00000328863 CIAO1O76071 339 aa18.46■□□□□ 0.55
CLRN1-203ENST00000328863 LRRC24Q50LG9 513 aa18.46■□□□□ 0.55
CLRN1-203ENST00000328863 ADARB2Q9NS39 739 aaKnown RBP18.46■□□□□ 0.55
CLRN1-203ENST00000328863 MYO3BQ8WXR4 1341 aa18.46■□□□□ 0.55
CLRN1-203ENST00000328863 USP17L3A6NCW0 530 aa18.45■□□□□ 0.54
CLRN1-203ENST00000328863 USP17L4A6NCW7 530 aa18.45■□□□□ 0.54
CLRN1-203ENST00000328863 PUM3Q15397 648 aaKnown RBP18.45■□□□□ 0.54
CLRN1-203ENST00000328863 USP17L1Q7RTZ2 530 aa18.45■□□□□ 0.54
CLRN1-203ENST00000328863 PANK1Q8TE04 598 aa18.45■□□□□ 0.54
CLRN1-203ENST00000328863 FBXW7Q969H0 707 aa18.45■□□□□ 0.54
CLRN1-203ENST00000328863 SIL1Q9H173 461 aa18.45■□□□□ 0.54
CLRN1-203ENST00000328863 IRS2Q9Y4H2 1338 aa18.45■□□□□ 0.54
CLRN1-203ENST00000328863 WTIPA6NIX2 430 aaPredicted RBP18.44■□□□□ 0.54
CLRN1-203ENST00000328863 PDE8BO95263 885 aa18.44■□□□□ 0.54
CLRN1-203ENST00000328863 MVPQ14764 893 aaKnown RBP18.44■□□□□ 0.54
CLRN1-203ENST00000328863 CHADLQ6NUI6 762 aa18.44■□□□□ 0.54
CLRN1-203ENST00000328863 RSBN1LQ6PCB5 846 aaPredicted RBP18.44■□□□□ 0.54
CLRN1-203ENST00000328863 USP50Q70EL3 339 aaPredicted RBP18.44■□□□□ 0.54
CLRN1-203ENST00000328863 TXNRD3Q86VQ6 643 aa18.44■□□□□ 0.54
CLRN1-203ENST00000328863 MICALL2Q8IY33 904 aa18.44■□□□□ 0.54
CLRN1-203ENST00000328863 VGLL2Q8N8G2 317 aa18.44■□□□□ 0.54
CLRN1-203ENST00000328863 DPF2Q92785 391 aa18.44■□□□□ 0.54
CLRN1-203ENST00000328863 CHMP4BQ9H444 224 aaKnown RBP18.44■□□□□ 0.54
CLRN1-203ENST00000328863 COPRSQ9NQ92 184 aa18.44■□□□□ 0.54
CLRN1-203ENST00000328863 DDX19BQ9UMR2 479 aa18.44■□□□□ 0.54
CLRN1-203ENST00000328863 H7C1D1 291 aa18.43■□□□□ 0.54
CLRN1-203ENST00000328863 SNAP23O00161 211 aa18.43■□□□□ 0.54
CLRN1-203ENST00000328863 VIL1P09327 827 aaKnown RBP18.43■□□□□ 0.54
CLRN1-203ENST00000328863 IL15P40933 162 aaPredicted RBP18.43■□□□□ 0.54
CLRN1-203ENST00000328863 EPS15P42566 896 aa18.43■□□□□ 0.54
CLRN1-203ENST00000328863 STRIP1Q5VSL9 837 aa18.43■□□□□ 0.54
CLRN1-203ENST00000328863 AGBL3Q8NEM8 1001 aa18.43■□□□□ 0.54
CLRN1-203ENST00000328863 ZBTB12Q9Y330 459 aaPredicted RBP18.43■□□□□ 0.54
CLRN1-203ENST00000328863 IFIT1P09914 478 aaKnown RBP18.42■□□□□ 0.54
CLRN1-203ENST00000328863 POTEIP0CG38 1075 aa18.42■□□□□ 0.54
CLRN1-203ENST00000328863 POTEJP0CG39 1038 aa18.42■□□□□ 0.54
CLRN1-203ENST00000328863 HSPA6P17066 643 aa18.42■□□□□ 0.54
CLRN1-203ENST00000328863 CD209Q9NNX6 404 aa18.42■□□□□ 0.54
CLRN1-203ENST00000328863 CNOT7Q9UIV1 285 aaKnown RBP18.42■□□□□ 0.54
CLRN1-203ENST00000328863 CLEC11AQ9Y240 323 aa18.42■□□□□ 0.54
CLRN1-203ENST00000328863 ZBTB7BO15156 539 aaPredicted RBP18.41■□□□□ 0.54
CLRN1-203ENST00000328863 SLC5A1P13866 664 aa18.41■□□□□ 0.54
CLRN1-203ENST00000328863 PDE3AQ14432 1141 aa18.41■□□□□ 0.54
CLRN1-203ENST00000328863 CAVIN4Q5BKX8 364 aa18.41■□□□□ 0.54
CLRN1-203ENST00000328863 VPS37DQ86XT2 251 aa18.41■□□□□ 0.54
CLRN1-203ENST00000328863 C1orf115Q9H7X2 142 aa18.41■□□□□ 0.54
CLRN1-203ENST00000328863 KCNQ5Q9NR82 932 aa18.41■□□□□ 0.54
CLRN1-203ENST00000328863 PA2G4Q9UQ80 394 aaKnown RBP18.41■□□□□ 0.54
CLRN1-203ENST00000328863 IL1R1P14778 569 aa18.4■□□□□ 0.54
CLRN1-203ENST00000328863 DACT2Q5SW24 774 aa18.4■□□□□ 0.54
CLRN1-203ENST00000328863 ATG9AQ7Z3C6 839 aa18.4■□□□□ 0.54
CLRN1-203ENST00000328863 CEP126Q9P2H0 1117 aa18.4■□□□□ 0.54
CLRN1-203ENST00000328863 ECM29Q5VYK3 1845 aa18.39■□□□□ 0.54
CLRN1-203ENST00000328863 PNMA6EA0A0J9YXQ4 647 aa18.39■□□□□ 0.53
CLRN1-203ENST00000328863 HIBADHP31937 336 aaKnown RBP18.39■□□□□ 0.53
CLRN1-203ENST00000328863 ATP2B3Q16720 1220 aa18.39■□□□□ 0.53
CLRN1-203ENST00000328863 LPIN2Q92539 896 aa18.39■□□□□ 0.53
CLRN1-203ENST00000328863 COG6Q9Y2V7 657 aa18.39■□□□□ 0.53
CLRN1-203ENST00000328863 TRPM7Q96QT4 1865 aa18.39■□□□□ 0.53
CLRN1-203ENST00000328863 GYG1P46976 350 aa18.38■□□□□ 0.53
CLRN1-203ENST00000328863 GTF2IP78347 998 aa18.38■□□□□ 0.53
CLRN1-203ENST00000328863 KIF4BQ2VIQ3 1234 aa18.38■□□□□ 0.53
CLRN1-203ENST00000328863 TTLL5Q6EMB2 1281 aa18.38■□□□□ 0.53
CLRN1-203ENST00000328863 TRPM4Q8TD43 1214 aa18.38■□□□□ 0.53
CLRN1-203ENST00000328863 USP17L8P0C7I0 530 aa18.37■□□□□ 0.53
CLRN1-203ENST00000328863 FGFR2P21802 821 aa18.37■□□□□ 0.53
CLRN1-203ENST00000328863 APLP1P51693 650 aa18.37■□□□□ 0.53
CLRN1-203ENST00000328863 OGFOD1Q8N543 542 aa18.37■□□□□ 0.53
CLRN1-203ENST00000328863 HDAC9Q9UKV0 1011 aa18.37■□□□□ 0.53
CLRN1-203ENST00000328863 SHTN1A0MZ66 631 aa18.36■□□□□ 0.53
CLRN1-203ENST00000328863 MMP14P50281 582 aa18.36■□□□□ 0.53
CLRN1-203ENST00000328863 ZNF280AP59817 542 aaPredicted RBP18.36■□□□□ 0.53
CLRN1-203ENST00000328863 FKBP1AP62942 108 aaKnown RBP18.36■□□□□ 0.53
CLRN1-203ENST00000328863 G3BP1Q13283 466 aaKnown RBP eCLIP18.36■□□□□ 0.53
CLRN1-203ENST00000328863 OS9Q13438 667 aaPredicted RBP18.36■□□□□ 0.53
CLRN1-203ENST00000328863 POLA2Q14181 598 aa18.36■□□□□ 0.53
CLRN1-203ENST00000328863 TBC1D10BQ4KMP7 808 aaPredicted RBP18.36■□□□□ 0.53
CLRN1-203ENST00000328863 CEP85Q6P2H3 762 aa18.36■□□□□ 0.53
CLRN1-203ENST00000328863 SSH3Q8TE77 659 aa18.36■□□□□ 0.53
CLRN1-203ENST00000328863 ZC3H15Q8WU90 426 aaKnown RBP18.36■□□□□ 0.53
CLRN1-203ENST00000328863 FAM84BQ96KN1 310 aaPredicted RBP18.36■□□□□ 0.53
CLRN1-203ENST00000328863 FRAT2O75474 233 aaPredicted RBP18.35■□□□□ 0.53
CLRN1-203ENST00000328863 RRP1P56182 461 aaKnown RBP18.35■□□□□ 0.53
CLRN1-203ENST00000328863 ATP8B2P98198 1209 aa18.35■□□□□ 0.53
CLRN1-203ENST00000328863 MAP1SQ66K74 1059 aaPredicted RBP18.35■□□□□ 0.53
CLRN1-203ENST00000328863 SAMD7Q7Z3H4 446 aa18.35■□□□□ 0.53
CLRN1-203ENST00000328863 TDRD7Q8NHU6 1098 aaKnown RBP18.35■□□□□ 0.53
CLRN1-203ENST00000328863 GMLQ99445 158 aa18.35■□□□□ 0.53
CLRN1-203ENST00000328863 AKAP2Q9Y2D5 859 aa18.35■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms