RNA–Protein interactions for RNA: ENST00000326495.9

SSH1-202, Transcript of slingshot protein phosphatase 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SSH1, Length 13,040 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH1-202ENST00000326495 SSH1Q8WYL5 1049 aa7.16□□□□□ -1.26
SSH1-202ENST00000326495 CAPN2P17655 700 aa7.16□□□□□ -1.26
SSH1-202ENST00000326495 SRGAP1Q7Z6B7 1085 aa7.16□□□□□ -1.26
SSH1-202ENST00000326495 TRIM7Q9C029 511 aa7.16□□□□□ -1.26
SSH1-202ENST00000326495 PFDN4Q9NQP4 134 aa7.16□□□□□ -1.26
SSH1-202ENST00000326495 RAB3GAP1Q15042 981 aa7.16□□□□□ -1.26
SSH1-202ENST00000326495 CKAP2LQ8IYA6 745 aa7.16□□□□□ -1.26
SSH1-202ENST00000326495 GABPB1Q06547 395 aaPredicted RBP7.16□□□□□ -1.26
SSH1-202ENST00000326495 SETDB1Q15047 1291 aa7.16□□□□□ -1.26
SSH1-202ENST00000326495 TDRD12Q587J7 1177 aaKnown RBP7.16□□□□□ -1.26
SSH1-202ENST00000326495 MPNDQ8N594 471 aa7.16□□□□□ -1.26
SSH1-202ENST00000326495 SBDSQ9Y3A5 250 aaKnown RBP eCLIP7.16□□□□□ -1.26
SSH1-202ENST00000326495 CCDC194A0A1B0GVG4 234 aa7.16□□□□□ -1.26
SSH1-202ENST00000326495 TRPC3Q13507 836 aa7.16□□□□□ -1.26
SSH1-202ENST00000326495 TAF7Q15545 349 aaPredicted RBP7.16□□□□□ -1.26
SSH1-202ENST00000326495 SAMD1Q6SPF0 538 aaPredicted RBP7.16□□□□□ -1.26
SSH1-202ENST00000326495 NBPF11Q86T75 865 aa7.16□□□□□ -1.26
SSH1-202ENST00000326495 IMPG2Q9BZV3 1241 aa7.16□□□□□ -1.26
SSH1-202ENST00000326495 VCX3AQ9NNX9 186 aa7.16□□□□□ -1.26
SSH1-202ENST00000326495 DNAJC8O75937 253 aaPredicted RBP7.16□□□□□ -1.26
SSH1-202ENST00000326495 ATP2B2Q01814 1243 aa7.16□□□□□ -1.26
SSH1-202ENST00000326495 TMEM132EQ6IEE7 984 aa7.16□□□□□ -1.26
SSH1-202ENST00000326495 IPO4Q8TEX9 1081 aaKnown RBP7.16□□□□□ -1.26
SSH1-202ENST00000326495 MTMR7Q9Y216 660 aa7.16□□□□□ -1.26
SSH1-202ENST00000326495 NPC1L1Q9UHC9 1359 aa7.16□□□□□ -1.26
SSH1-202ENST00000326495 ACTN4O43707 911 aaKnown RBP7.16□□□□□ -1.26
SSH1-202ENST00000326495 ZNF189O75820 626 aaPredicted RBP7.16□□□□□ -1.26
SSH1-202ENST00000326495 ZWINTO95229 277 aa7.16□□□□□ -1.26
SSH1-202ENST00000326495 RPL13P26373 211 aaKnown RBP7.16□□□□□ -1.26
SSH1-202ENST00000326495 DBF4Q9UBU7 674 aaPredicted RBP7.16□□□□□ -1.26
SSH1-202ENST00000326495 MYH15Q9Y2K3 1946 aa7.16□□□□□ -1.26
SSH1-202ENST00000326495 FCHSD1Q86WN1 690 aa7.16□□□□□ -1.26
SSH1-202ENST00000326495 HSPA8P11142 646 aaKnown RBP7.16□□□□□ -1.26
SSH1-202ENST00000326495 CCDC96Q2M329 555 aa7.16□□□□□ -1.26
SSH1-202ENST00000326495 CFAP70Q5T0N1 1121 aa7.16□□□□□ -1.26
SSH1-202ENST00000326495 CDC5LQ99459 802 aaKnown RBP7.16□□□□□ -1.26
SSH1-202ENST00000326495 EXOC1Q9NV70 894 aa7.16□□□□□ -1.26
SSH1-202ENST00000326495 AOX1Q06278 1338 aa7.16□□□□□ -1.26
SSH1-202ENST00000326495 KIF5AQ12840 1032 aa7.15□□□□□ -1.26
SSH1-202ENST00000326495 FAM76AQ8TAV0 307 aa7.15□□□□□ -1.26
SSH1-202ENST00000326495 SLC12A5Q9H2X9 1139 aa7.15□□□□□ -1.26
SSH1-202ENST00000326495 LIG1P18858 919 aa7.15□□□□□ -1.26
SSH1-202ENST00000326495 MCM6Q14566 821 aa7.15□□□□□ -1.26
SSH1-202ENST00000326495 TSNAXIP1Q2TAA8 658 aa7.15□□□□□ -1.26
SSH1-202ENST00000326495 TRIM27P14373 513 aa7.15□□□□□ -1.26
SSH1-202ENST00000326495 TNNC1P63316 161 aa7.15□□□□□ -1.26
SSH1-202ENST00000326495 PLCB1Q9NQ66 1216 aa7.15□□□□□ -1.26
SSH1-202ENST00000326495 THEGQ9P2T0 379 aa7.15□□□□□ -1.26
SSH1-202ENST00000326495 DKC1O60832 514 aaKnown RBP eCLIP7.15□□□□□ -1.26
SSH1-202ENST00000326495 HCLS1P14317 486 aaPredicted RBP7.15□□□□□ -1.26
SSH1-202ENST00000326495 LACTBP83111 547 aaPredicted RBP7.15□□□□□ -1.26
SSH1-202ENST00000326495 SAMD15Q9P1V8 674 aa7.15□□□□□ -1.26
SSH1-202ENST00000326495 MTUS1Q9ULD2 1270 aa7.15□□□□□ -1.26
SSH1-202ENST00000326495 TTC41PQ6P2S7 1318 aa7.15□□□□□ -1.26
SSH1-202ENST00000326495 MAP7D1Q3KQU3 841 aa7.15□□□□□ -1.26
SSH1-202ENST00000326495 CCDC26Q8TAB7 109 aa7.15□□□□□ -1.26
SSH1-202ENST00000326495 PARP2Q9UGN5 583 aa7.15□□□□□ -1.26
SSH1-202ENST00000326495 EXOC6BQ9Y2D4 811 aa7.15□□□□□ -1.26
SSH1-202ENST00000326495 VIRMAQ69YN4 1812 aaKnown RBP7.15□□□□□ -1.26
SSH1-202ENST00000326495 EVI5O60447 810 aa7.15□□□□□ -1.26
SSH1-202ENST00000326495 TRIM37O94972 964 aa7.15□□□□□ -1.26
SSH1-202ENST00000326495 UBA7P41226 1012 aa7.15□□□□□ -1.26
SSH1-202ENST00000326495 NCBP1Q09161 790 aaKnown RBP7.15□□□□□ -1.26
SSH1-202ENST00000326495 PPP1R14CQ8TAE6 165 aa7.15□□□□□ -1.26
SSH1-202ENST00000326495 CALR3Q96L12 384 aaKnown RBP7.15□□□□□ -1.26
SSH1-202ENST00000326495 RUNDC3BQ96NL0 473 aa7.15□□□□□ -1.27
SSH1-202ENST00000326495 A0A1B0GUL7 405 aa7.15□□□□□ -1.27
SSH1-202ENST00000326495 N4BP3O15049 544 aa7.15□□□□□ -1.27
SSH1-202ENST00000326495 STMN1P16949 149 aa7.15□□□□□ -1.27
SSH1-202ENST00000326495 SYT1P21579 422 aa7.15□□□□□ -1.27
SSH1-202ENST00000326495 NOP2P46087 812 aaKnown RBP7.15□□□□□ -1.27
SSH1-202ENST00000326495 NUP58Q9BVL2 599 aa7.15□□□□□ -1.27
SSH1-202ENST00000326495 ATP11AP98196 1134 aa7.15□□□□□ -1.27
SSH1-202ENST00000326495 SMC5Q8IY18 1101 aa7.15□□□□□ -1.27
SSH1-202ENST00000326495 SPDYE4A6NLX3 237 aa7.15□□□□□ -1.27
SSH1-202ENST00000326495 SLC5A1P13866 664 aa7.15□□□□□ -1.27
SSH1-202ENST00000326495 LLPHQ9BRT6 129 aaKnown RBP7.15□□□□□ -1.27
SSH1-202ENST00000326495 MIS12Q9H081 205 aa7.15□□□□□ -1.27
SSH1-202ENST00000326495 SHANK2Q9UPX8 1470 aa7.15□□□□□ -1.27
SSH1-202ENST00000326495 ARHGEF11O15085 1522 aa7.15□□□□□ -1.27
SSH1-202ENST00000326495 DNMT1P26358 1616 aaKnown RBP7.15□□□□□ -1.27
SSH1-202ENST00000326495 ESCO1Q5FWF5 840 aa7.14□□□□□ -1.27
SSH1-202ENST00000326495 CABP1Q9NZU7 370 aa7.14□□□□□ -1.27
SSH1-202ENST00000326495 FAN1Q9Y2M0 1017 aa7.14□□□□□ -1.27
SSH1-202ENST00000326495 METTL24Q5JXM2 366 aa7.14□□□□□ -1.27
SSH1-202ENST00000326495 MAIP1Q8WWC4 291 aa7.14□□□□□ -1.27
SSH1-202ENST00000326495 ECHDC1Q9NTX5 307 aa7.14□□□□□ -1.27
SSH1-202ENST00000326495 RSPH14Q9UHP6 348 aa7.14□□□□□ -1.27
SSH1-202ENST00000326495 XRCC6P12956 609 aaKnown RBP eCLIP7.14□□□□□ -1.27
SSH1-202ENST00000326495 NBPF8Q3BBV2 869 aa7.14□□□□□ -1.27
SSH1-202ENST00000326495 ANO6Q4KMQ2 910 aa7.14□□□□□ -1.27
SSH1-202ENST00000326495 LGSNQ5TDP6 509 aa7.14□□□□□ -1.27
SSH1-202ENST00000326495 NUTM2AQ8IVF1 878 aaPredicted RBP7.14□□□□□ -1.27
SSH1-202ENST00000326495 NCOA7Q8NI08 942 aa7.14□□□□□ -1.27
SSH1-202ENST00000326495 SEPT10Q9P0V9 454 aa7.14□□□□□ -1.27
SSH1-202ENST00000326495 MAP1BP46821 2468 aaKnown RBP7.14□□□□□ -1.27
SSH1-202ENST00000326495 LARSQ9P2J5 1176 aaKnown RBP7.14□□□□□ -1.27
SSH1-202ENST00000326495 LUC7L3O95232 432 aaKnown RBP7.14□□□□□ -1.27
SSH1-202ENST00000326495 CYB5RLQ6IPT4 315 aa7.14□□□□□ -1.27
SSH1-202ENST00000326495 LMNTD2Q8IXW0 634 aa7.14□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms