RNA–Protein interactions for RNA: ENST00000326470.9

SSH1-201, Transcript of slingshot protein phosphatase 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SSH1, Length 2,432 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH1-201ENST00000326470 DNAJC2Q99543 621 aaKnown RBP19.54■□□□□ 0.72
SSH1-201ENST00000326470 NDUFB9Q9Y6M9 179 aa19.54■□□□□ 0.72
SSH1-201ENST00000326470 ERBB3P21860 1342 aa19.54■□□□□ 0.72
SSH1-201ENST00000326470 PTPN12Q05209 780 aaKnown RBP19.54■□□□□ 0.72
SSH1-201ENST00000326470 APOBRQ0VD83 1088 aa19.54■□□□□ 0.72
SSH1-201ENST00000326470 FMR1NBQ8N0W7 255 aaPredicted RBP19.54■□□□□ 0.72
SSH1-201ENST00000326470 EXOSC10Q01780 885 aaKnown RBP19.53■□□□□ 0.72
SSH1-201ENST00000326470 METTL22Q9BUU2 404 aaPredicted RBP19.53■□□□□ 0.72
SSH1-201ENST00000326470 SH3TC1Q8TE82 1336 aa19.53■□□□□ 0.72
SSH1-201ENST00000326470 ILDR1Q86SU0 546 aaPredicted RBP19.53■□□□□ 0.72
SSH1-201ENST00000326470 MRPS27Q92552 414 aaKnown RBP19.53■□□□□ 0.72
SSH1-201ENST00000326470 DBNDD2Q9BQY9 259 aa19.52■□□□□ 0.72
SSH1-201ENST00000326470 L2HGDHQ9H9P8 463 aa19.52■□□□□ 0.72
SSH1-201ENST00000326470 PHRF1Q9P1Y6 1649 aaKnown RBP19.52■□□□□ 0.72
SSH1-201ENST00000326470 CCT2P78371 535 aaKnown RBP19.52■□□□□ 0.71
SSH1-201ENST00000326470 DDX46Q7L014 1031 aaKnown RBP19.52■□□□□ 0.71
SSH1-201ENST00000326470 KBTBD3Q8NAB2 608 aa19.52■□□□□ 0.71
SSH1-201ENST00000326470 MYD88Q99836 296 aa19.52■□□□□ 0.71
SSH1-201ENST00000326470 BPIFA3Q9BQP9 254 aa19.52■□□□□ 0.71
SSH1-201ENST00000326470 PCDHA7Q9UN72 937 aa19.52■□□□□ 0.71
SSH1-201ENST00000326470 A0A1W2PQ27 194 aa19.51■□□□□ 0.71
SSH1-201ENST00000326470 A0A1W2PQ64 194 aa19.51■□□□□ 0.71
SSH1-201ENST00000326470 A0A1W2PQD8 194 aa19.51■□□□□ 0.71
SSH1-201ENST00000326470 E4F1Q66K89 784 aaPredicted RBP19.51■□□□□ 0.71
SSH1-201ENST00000326470 ADALQ6DHV7 355 aa19.51■□□□□ 0.71
SSH1-201ENST00000326470 CCDC150Q8NCX0 1101 aa19.51■□□□□ 0.71
SSH1-201ENST00000326470 ERCC4Q92889 916 aaPredicted RBP19.51■□□□□ 0.71
SSH1-201ENST00000326470 SDF4Q9BRK5 362 aa19.51■□□□□ 0.71
SSH1-201ENST00000326470 DSCC1Q9BVC3 393 aa19.51■□□□□ 0.71
SSH1-201ENST00000326470 RTEL1Q9NZ71 1219 aa19.51■□□□□ 0.71
SSH1-201ENST00000326470 SIPA1L3O60292 1781 aaPredicted RBP19.5■□□□□ 0.71
SSH1-201ENST00000326470 PSDA5PKW4 1024 aaPredicted RBP19.5■□□□□ 0.71
SSH1-201ENST00000326470 KCNJ6P48051 423 aa19.5■□□□□ 0.71
SSH1-201ENST00000326470 XAGE3Q8WTP9 111 aa19.5■□□□□ 0.71
SSH1-201ENST00000326470 CHMP4CQ96CF2 233 aa19.5■□□□□ 0.71
SSH1-201ENST00000326470 ZNF274Q96GC6 653 aaPredicted RBP19.5■□□□□ 0.71
SSH1-201ENST00000326470 NCOA5Q9HCD5 579 aaKnown RBP19.5■□□□□ 0.71
SSH1-201ENST00000326470 RABL6Q3YEC7 729 aaPredicted RBP19.5■□□□□ 0.71
SSH1-201ENST00000326470 RBM33Q96EV2 1170 aaKnown RBP19.5■□□□□ 0.71
SSH1-201ENST00000326470 PPP1R13BQ96KQ4 1090 aa19.5■□□□□ 0.71
SSH1-201ENST00000326470 KIAA1468Q9P260 1216 aa19.5■□□□□ 0.71
SSH1-201ENST00000326470 MYL6BP14649 208 aa19.49■□□□□ 0.71
SSH1-201ENST00000326470 PDIA3P30101 505 aaKnown RBP19.49■□□□□ 0.71
SSH1-201ENST00000326470 GUCY1B3Q02153 619 aa19.49■□□□□ 0.71
SSH1-201ENST00000326470 DHX8Q14562 1220 aaKnown RBP19.49■□□□□ 0.71
SSH1-201ENST00000326470 COPS6Q7L5N1 327 aa19.49■□□□□ 0.71
SSH1-201ENST00000326470 HELLSQ9NRZ9 838 aa19.49■□□□□ 0.71
SSH1-201ENST00000326470 CARMIL3Q8ND23 1372 aa19.49■□□□□ 0.71
SSH1-201ENST00000326470 ABCC6O95255 1503 aa19.49■□□□□ 0.71
SSH1-201ENST00000326470 TUBB4AP04350 444 aa19.49■□□□□ 0.71
SSH1-201ENST00000326470 HSPA2P54652 639 aa19.49■□□□□ 0.71
SSH1-201ENST00000326470 ARMCX5Q6P1M9 558 aa19.49■□□□□ 0.71
SSH1-201ENST00000326470 FBXW7Q969H0 707 aa19.49■□□□□ 0.71
SSH1-201ENST00000326470 XPO4Q9C0E2 1151 aaKnown RBP19.49■□□□□ 0.71
SSH1-201ENST00000326470 LAMA4Q16363 1823 aa19.48■□□□□ 0.71
SSH1-201ENST00000326470 PALLDQ8WX93 1383 aa19.48■□□□□ 0.71
SSH1-201ENST00000326470 A0A1B0GVL5 298 aa19.48■□□□□ 0.71
SSH1-201ENST00000326470 H2AFXP16104 143 aaPredicted RBP19.48■□□□□ 0.71
SSH1-201ENST00000326470 NDUFA8P51970 172 aa19.48■□□□□ 0.71
SSH1-201ENST00000326470 DPCR1Q3MIW9 517 aa19.48■□□□□ 0.71
SSH1-201ENST00000326470 CCDC93Q567U6 631 aa19.48■□□□□ 0.71
SSH1-201ENST00000326470 ZNF790Q6PG37 636 aa19.48■□□□□ 0.71
SSH1-201ENST00000326470 ZNF446Q9NWS9 450 aa19.48■□□□□ 0.71
SSH1-201ENST00000326470 E7EWF7 191 aa19.47■□□□□ 0.71
SSH1-201ENST00000326470 FAM193AP78312 1265 aa19.47■□□□□ 0.71
SSH1-201ENST00000326470 LMTK3Q96Q04 1460 aa19.47■□□□□ 0.71
SSH1-201ENST00000326470 SMC2O95347 1197 aa19.47■□□□□ 0.71
SSH1-201ENST00000326470 SFPQP23246 707 aaKnown RBP eCLIP19.47■□□□□ 0.71
SSH1-201ENST00000326470 PSME1Q06323 249 aa19.47■□□□□ 0.71
SSH1-201ENST00000326470 ZRSR1Q15695 479 aaKnown RBP19.47■□□□□ 0.71
SSH1-201ENST00000326470 TMC6Q7Z403 805 aa19.47■□□□□ 0.71
SSH1-201ENST00000326470 ARHGEF25Q86VW2 580 aa19.47■□□□□ 0.71
SSH1-201ENST00000326470 LINC00301Q8NCQ3 95 aa19.47■□□□□ 0.71
SSH1-201ENST00000326470 IFNKQ9P0W0 207 aa19.47■□□□□ 0.71
SSH1-201ENST00000326470 FDPSP14324 419 aaKnown RBP19.46■□□□□ 0.71
SSH1-201ENST00000326470 ANKRD13DQ6ZTN6 518 aa19.46■□□□□ 0.71
SSH1-201ENST00000326470 TICAM2Q86XR7 235 aa19.46■□□□□ 0.71
SSH1-201ENST00000326470 NEDD4P46934 1319 aa19.46■□□□□ 0.71
SSH1-201ENST00000326470 SYT10Q6XYQ8 523 aa19.46■□□□□ 0.71
SSH1-201ENST00000326470 KCNG4Q8TDN1 519 aa19.46■□□□□ 0.71
SSH1-201ENST00000326470 ANKRD24Q8TF21 1146 aa19.46■□□□□ 0.71
SSH1-201ENST00000326470 PODXL2Q9NZ53 605 aa19.46■□□□□ 0.71
SSH1-201ENST00000326470 NAP1L2Q9ULW6 460 aaPredicted RBP19.46■□□□□ 0.71
SSH1-201ENST00000326470 ADAMTS7Q9UKP4 1686 aa19.45■□□□□ 0.7
SSH1-201ENST00000326470 NRDCO43847 1150 aa19.45■□□□□ 0.7
SSH1-201ENST00000326470 PPFIA3O75145 1194 aa19.45■□□□□ 0.7
SSH1-201ENST00000326470 BMS1Q14692 1282 aaKnown RBP19.45■□□□□ 0.7
SSH1-201ENST00000326470 ERCC6LQ2NKX8 1250 aa19.45■□□□□ 0.7
SSH1-201ENST00000326470 SLC39A6Q13433 755 aa19.45■□□□□ 0.7
SSH1-201ENST00000326470 STK38Q15208 465 aa19.45■□□□□ 0.7
SSH1-201ENST00000326470 ZMYM1Q5SVZ6 1142 aa19.45■□□□□ 0.7
SSH1-201ENST00000326470 UBE3BQ7Z3V4 1068 aa19.45■□□□□ 0.7
SSH1-201ENST00000326470 CREBRFQ8IUR6 639 aa19.45■□□□□ 0.7
SSH1-201ENST00000326470 FBXL16Q8N461 479 aa19.45■□□□□ 0.7
SSH1-201ENST00000326470 CCDC66A2RUB6 948 aa19.44■□□□□ 0.7
SSH1-201ENST00000326470 NPHP1O15259 732 aa19.44■□□□□ 0.7
SSH1-201ENST00000326470 YEATS4O95619 227 aa19.44■□□□□ 0.7
SSH1-201ENST00000326470 GCP02774 474 aa19.44■□□□□ 0.7
SSH1-201ENST00000326470 HSPD1P10809 573 aaKnown RBP19.44■□□□□ 0.7
SSH1-201ENST00000326470 TPM4P67936 248 aa19.44■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 68.7 ms